EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr335689318Nonsense_MutationnovelE140*0.3
ACCchr335684057IntronNA0.62
BLCAchr335792441Missense_MutationnovelP698S0.38
BLCAchr335729387Missense_Mutationrs554898023G437V0.12
BLCAchr335709024Missense_Mutationrs774083682R284T0.16
BLCAchr335687748Missense_MutationNAH91N0.12
BLCAchr335793856SilentnovelL779L0.15
BLCAchr335681758Missense_MutationnovelE3Q0.24
BLCAchr335744539Intronnovel0.3
BLCAchr335689382Missense_MutationnovelS161Y0.51
BLCAchr335690095Missense_MutationNAL167R0.25R3H
BLCAchr335687878Nonsense_MutationnovelS134*0.07
BLCAchr335793839Missense_MutationnovelQ774E0.32
BRCAchr335687867Missense_MutationNAI130M0.38
BRCAchr335744545IntronNA0.17
BRCAchr3357940823'UTRnovel0.29
BRCAchr335682869Nonsense_MutationNAQ51*0.35
BRCAchr335729340Silentrs757564373S421S0.81
BRCAchr335681863Nonsense_MutationNAE38*0.48
BRCAchr335684158Intronnovel0.26
BRCAchr335683728Splice_RegionNAS58S0.41
BRCAchr335685861Intronnovel0.14
BRCAchr335792422SilentNAG691G0.32
BRCAchr335743871Nonsense_Mutationrs199538011Y646*0.13
BRCAchr335707065Missense_MutationNAD260Y0.14
BRCAchr335684059Intronnovel0.11
BRCAchr335709057Missense_MutationnovelI295T0.09
BRCAchr335739370Silentrs368956855S566S0.26
CESCchr335690910Missense_MutationNAM197I0.63R3H
CESCchr335743896Missense_Mutationrs375827523R655W0.53
CESCchr3356799005'UTRnovel0.49
CESCchr335744513IntronNA0.2
CESCchr3357940523'UTRnovel0.56
CESCchr335684594Intronnovel0.32
CESCchr335683777Frame_Shift_DelnovelS75Lfs*730.13
CESCchr335721646Missense_MutationNAQ346R0.2
CESCchr335792447Missense_MutationNAQ700K0.57
CESCchr335709020Missense_MutationNAE283Q0.4
CESCchr335684057IntronNA0.29
CESCchr335684940Intronnovel0.29
CESCchr335743950Missense_MutationNAA673T0.31
CESCchr335737234Nonsense_MutationNAQ506*0.18
CESCchr335681767Missense_MutationnovelD6N0.45
CESCchr335684799Intronnovel0.12
CESCchr335684248Intronnovel0.52
CHOLchr3356798465'UTRnovel0.78
CHOLchr335685825Intronnovel0.24
CHOLchr335684470Intronnovel0.35
COADchr335721751Missense_Mutationrs781625938T381M0.37
COADchr335743909Missense_MutationNAP659L0.39
COADchr335737246Silentrs192238724R510R0.07
COADchr335687880Missense_MutationnovelK135Q0.2
COADchr335721724Missense_Mutationrs535145550R372H0.22
COADchr335684057IntronNA0.05
COADchr335721754Missense_Mutationrs199754646A382V0.26
COADchr335743922Silentrs550779254N663N0.4
COADchr335721816Missense_MutationnovelG403W0.26
COADchr335684106Intronnovel0.12
COADchr335729363Missense_MutationnovelL429P0.67
COADchr335737301Missense_Mutationrs142886822P528L0.44
COADchr335739386Frame_Shift_DelNAP573Hfs*210.37
COADchr335744497IntronNA0.7
COADchr335707071Nonsense_MutationNAE262*0.3
COADchr335729459Missense_MutationnovelS461I0.25
COADchr335743930Missense_MutationNAR666K0.11
COADchr335721616Missense_MutationNAD336G0.23
COADchr335689342Missense_MutationNAD148Y0.39
COADchr335707071Nonsense_MutationNAE262*0.32
COADchr335737252Missense_Mutationrs374241256A512T0.19
COADchr335743923Missense_Mutationrs140987024A664T0.29
COADchr3357940683'UTRnovel0.21
COADchr335687853Missense_MutationnovelE126K0.18
COADchr335721724Missense_Mutationrs535145550R372H0.21
COADchr335793829Silentrs185867328P770P0.46
COADchr335729418SilentNAP447P0.39
COADchr335743857Missense_MutationnovelP642T0.4
COADchr335739493SilentnovelS607S0.27
COADchr335744509Intronnovel0.1
COADchr335721636Missense_MutationNAG343W0.32
DLBCchr335717317Missense_MutationnovelN319Y0.32
ESCAchr335681763Missense_MutationnovelQ4H0.41
ESCAchr335709044Missense_MutationnovelV291L0.34
ESCAchr335685708Intronnovel0.25
ESCAchr335729307Silentrs781699865S410S0.14
ESCAchr335721667Missense_MutationnovelL353R0.5
ESCAchr335685796Intronnovel0.24
ESCAchr335685270Intronnovel0.13
GBMchr335682874Missense_MutationnovelE52D0.08
GBMchr335689331Missense_MutationnovelS144Y0.3
GBMchr335792400Missense_MutationnovelS684F0.28
HNSCchr335793844Missense_MutationnovelN775K0.14
HNSCchr335690913SilentnovelL198L0.13
HNSCchr335737328Missense_Mutationrs766229611P537L0.21
HNSCchr335682885Missense_MutationNAS56F0.26
HNSCchr335689361Missense_MutationnovelI154N0.15
HNSCchr335691001Nonsense_MutationnovelR228*0.11
HNSCchr335721606Missense_MutationnovelG333R0.14
HNSCchr335793839Missense_MutationnovelQ774E0.18
HNSCchr335737298Missense_MutationnovelS527Y0.35
HNSCchr335737262Missense_MutationnovelG515E0.52
HNSCchr335792468Missense_Mutationrs749862781N707Y0.35
HNSCchr335707054Missense_MutationnovelN256I0.34
KIRCchr335729357Missense_MutationNAP427L0.07
LGGchr335729479Missense_MutationNAP468S0.13
LIHCchr335721829Missense_MutationNAK407T0.22
LIHCchr335729522Missense_MutationnovelL482H0.59
LIHCchr335737256Missense_Mutationrs566433210M513T0.06
LIHCchr335684118Intronnovel0.16
LUADchr335683769Missense_MutationnovelC72F0.16
LUADchr335739439Missense_MutationnovelQ589H0.15
LUADchr335739482Nonsense_MutationNAG604*0.48
LUADchr335715440Missense_MutationnovelS300L0.17
LUADchr335708989SilentnovelF272F0.71
LUADchr335708990Nonsense_MutationnovelR273*0.72
LUADchr335682866Missense_MutationNAN50H0.3
LUADchr335681880Splice_Regionrs576537216Q43Q0.12
LUADchr335690121Missense_MutationnovelD176Y0.11R3H
LUADchr335743922Silentrs550779254N663N0.41
LUADchr335721622Missense_MutationNAS338L0.19
LUADchr335721746SilentNAT379T0.31
LUADchr335707035Missense_MutationNAF250I0.11
LUADchr335792423Missense_MutationnovelL692I0.16
LUADchr335739547Missense_MutationNAQ625H0.12
LUADchr335793731Frame_Shift_DelnovelQ739Sfs*410.27
LUADchr335793732Missense_MutationNAP738H0.29
LUADchr335682869Missense_MutationnovelQ51K0.2
LUADchr335707071Missense_MutationnovelE262Q0.36
LUADchr335743964Splice_RegionNAA677A0.06
LUADchr335737275Missense_MutationNAQ519H0.44
LUADchr335681813Missense_Mutationrs139626582T21M0.17
LUADchr335743885Missense_Mutationrs139862817T651M0.07
LUADchr335708969Frame_Shift_DelnovelQ266Kfs*260.1
LUADchr335729397SilentnovelA440A0.16
LUADchr335792458Missense_Mutationrs369106158N703K0.15
LUADchr335739482Missense_MutationNAG604R0.41
LUADchr335681788Nonsense_MutationnovelE13*0.62
LUADchr335743933Missense_MutationNAS667I0.08
LUADchr335737327Missense_MutationNAP537T0.2
LUADchr335681874SilentnovelE41E0.12
LUADchr335793725Missense_MutationNAG736R0.09
LUADchr335709071Splice_SitenovelX299_splice0.19
LUADchr3357939983'UTRnovel0.13
LUADchr335729390Missense_MutationNAV438A0.2
LUADchr335793732Missense_MutationNAP738H0.12
LUADchr335729393Missense_MutationNAA439G0.3
LUADchr335687778Frame_Shift_DelnovelQ101Kfs*470.32
LUADchr335737268Missense_MutationNAS517Y0.48
LUSCchr335681795Missense_MutationnovelG15E0.67
LUSCchr335739416Missense_MutationnovelL582I0.34
LUSCchr335729437Frame_Shift_DelnovelG455Afs*370.45
LUSCchr335744555IntronNA0.83
LUSCchr335792484Missense_MutationnovelP712R0.07
LUSCchr335793772Missense_MutationNAQ751H0.25
LUSCchr335717298Missense_MutationNAS312R0.43
LUSCchr335737246Nonsense_Mutationrs192238724R510*0.07
LUSCchr335793863Missense_MutationNAP782S0.22
LUSCchr335721701Missense_MutationnovelS364R0.41
LUSCchr335689326SilentnovelT142T0.22
LUSCchr335707000Missense_MutationNAL238S0.79
LUSCchr335689350Missense_MutationNAH150Q0.48
LUSCchr335729319SilentNAS414S0.4
LUSCchr335721725SilentnovelR372R0.53
LUSCchr335792411Missense_MutationNAG688R0.45
LUSCchr335721811Missense_MutationnovelS401I0.54
LUSCchr335729314Missense_MutationnovelS413A0.41
LUSCchr335739371Missense_MutationnovelG567R0.47
LUSCchr335739506Missense_MutationnovelP612T0.37
LUSCchr335743954Missense_MutationnovelA674V0.2
LUSCchr335684149Intronnovel0.8
LUSCchr335689326Silentrs756268326T142T0.22
LUSCchr335792486Missense_Mutationrs775615764V713L0.74
LUSCchr335743842Missense_MutationNAP637A0.33
OVchr335737341Missense_MutationNAM541I0.3
OVchr335684054Intronnovel0.22
OVchr335737301Missense_Mutationrs142886822P528L0.39
OVchr335682877SilentnovelR53R0.25
OVchr335729333Missense_MutationnovelS419L0.1
OVchr335721784Missense_MutationnovelR392K0.09
OVchr335743885Missense_Mutationrs139862817T651M0.16
PRADchr335721754Missense_Mutationrs199754646A382V0.16
PRADchr335721751Missense_Mutationrs781625938T381M0.36
PRADchr335743922Silentrs550779254N663N0.14
PRADchr335729415SilentnovelV446V0.29
PRADchr335737349Missense_MutationnovelP544H0.33
PRADchr335737247Missense_Mutationrs376713321R510Q0.07
READchr335739429Missense_Mutationrs140813903P586L0.42
READchr335792465Missense_MutationNAN706D0.39
READchr335744495Intronnovel0.36
READchr335739370Silentrs368956855S566S0.29
READchr335737301Missense_Mutationrs142886822P528L0.26
READchr335721756Missense_MutationNAS383G0.29
READchr335689374Missense_MutationNAK158N0.2
READchr335690103Missense_MutationnovelM170V0.12R3H
READchr335715472Missense_MutationnovelN311H0.09
READchr335729432Missense_MutationNAG452E0.12
SARCchr335687783SilentnovelE102E0.37
SARCchr335721613Missense_MutationNAR335K0.31
SARCchr335738271Intronnovel0.11
SARCchr335793710Missense_MutationnovelT731S0.32
SARCchr335690887Nonsense_MutationNAQ190*0.41R3H
SARCchr335793779Nonsense_MutationNAQ754*0.32
SKCMchr335681857Missense_MutationNAE36K0.33
SKCMchr335739477Missense_MutationNAP602L0.31
SKCMchr335690105Missense_MutationnovelM170I0.15R3H
SKCMchr335683781Missense_MutationNAS76F0.38
SKCMchr335690126SilentNAF177F0.24
SKCMchr335715456SilentNAE305E0.24
SKCMchr335687823Missense_MutationNAE116K0.34
SKCMchr335682865SilentnovelQ49Q0.52
SKCMchr335684158Intronnovel0.31
SKCMchr335690897Missense_MutationnovelS193L0.45R3H
SKCMchr335729479Missense_MutationNAP468S0.26
SKCMchr335793886SilentNAV789V0.4
SKCMchr335721651Missense_MutationNAS348C0.26
SKCMchr335744548Intronnovel0.12
SKCMchr335729339Missense_MutationNAS421L0.36
SKCMchr335690920Nonsense_Mutationrs760628136R201*0.07R3H
SKCMchr335793776Missense_MutationnovelG753S0.39
SKCMchr335721604Splice_SiteNAX332_splice0.18
SKCMchr335737247Missense_Mutationrs376713321R510Q0.46
SKCMchr335739538SilentNAP622P0.33
SKCMchr335792411Missense_MutationNAG688R0.29
SKCMchr335739373SilentnovelG567G0.63
SKCMchr335739507Missense_Mutationrs746985381P612L0.15
SKCMchr335739508SilentnovelP612P0.14
SKCMchr335681821Missense_MutationNAP24S0.5
SKCMchr335690126SilentNAF177F0.11
SKCMchr335708996Missense_MutationnovelD275N0.24
SKCMchr335729360Missense_MutationNAP428L0.35
SKCMchr335792478Missense_MutationNAG710E0.31
SKCMchr335715436Splice_Regionnovel0.23
SKCMchr335721719SilentnovelS370S0.36
SKCMchr335715469Missense_Mutationrs267599774E310K0.23
SKCMchr335729339Missense_MutationNAS421L0.21
SKCMchr335793712SilentNAT731T0.26
SKCMchr335709031SilentnovelE286E0.21
SKCMchr335739414Missense_MutationNAS581F0.21
SKCMchr335682889Splice_RegionnovelK57K0.41
SKCMchr335792411Missense_MutationNAG688R0.38
SKCMchr335792412Missense_Mutationrs762836472G688E0.38
SKCMchr335792461SilentNAV704V0.49
SKCMchr335687854Missense_MutationNAE126V0.11
SKCMchr335684046Intronnovel0.49
SKCMchr335687770Missense_MutationNAS98F0.13
SKCMchr335729528Missense_MutationnovelP484L0.14
SKCMchr335717339Missense_MutationnovelK326M0.56
SKCMchr335717340SilentnovelK326K0.54
SKCMchr335690916SilentnovelV199V0.42
SKCMchr335721785SilentNAR392R0.43
SKCMchr335721624Missense_MutationNAG339R0.17
SKCMchr335729447Missense_MutationNAV457A0.41
SKCMchr335739579Splice_SiteNAX635_splice0.27
SKCMchr335792505Missense_MutationNAS719F0.47
SKCMchr335707008Missense_MutationNAE241K0.48
SKCMchr335687867SilentNAI130I0.23
SKCMchr335690887Nonsense_MutationNAQ190*0.39R3H
SKCMchr335744485Intronnovel0.38
SKCMchr335709068Missense_MutationnovelD299N0.44
SKCMchr335792411Missense_MutationNAG688R0.35
SKCMchr335792412Missense_Mutationrs762836472G688E0.35
SKCMchr335792461SilentNAV704V0.48
SKCMchr335739423Missense_MutationNAP584L0.19
SKCMchr335739523SilentNAV617V0.22
SKCMchr335721626SilentNAG339G0.33
SKCMchr335687761Missense_MutationNAS95F0.43
SKCMchr335687829Missense_MutationNAD118N0.25
SKCMchr335729346SilentnovelS423S0.18
SKCMchr335709068Missense_MutationnovelD299N0.43
SKCMchr335737202Missense_MutationNAG495E0.22
SKCMchr335792478Missense_MutationNAG710E0.27
SKCMchr335737228Missense_MutationnovelT504P0.38
SKCMchr335707065Missense_MutationNAD260N0.42
SKCMchr335708981Missense_MutationnovelH270Y0.21
SKCMchr335721634Missense_MutationNAS342F0.81
SKCMchr335687764Missense_MutationNAS96N1
SKCMchr335687829Missense_MutationNAD118N0.39
SKCMchr335744548Intronnovel0.26
SKCMchr335721809SilentnovelR400R0.38
SKCMchr335729336Missense_MutationnovelG420E0.37
SKCMchr335739355Silentrs756746043L561L0.37
SKCMchr335729476Missense_MutationNAL467F0.41
SKCMchr335684057Intronnovel0.17
SKCMchr335792526Missense_MutationNAY726F0.29
SKCMchr335721615Missense_MutationNAD336N0.43
SKCMchr335721642Nonsense_Mutationrs545003470R345*0.5
SKCMchr335739513Missense_MutationNAS614F0.63
SKCMchr335729432Missense_MutationNAG452E0.92
SKCMchr335717356Missense_Mutationrs777286095R332W0.39
SKCMchr335690082Missense_MutationnovelD163N0.32
SKCMchr335709032Missense_MutationNAE287K0.38
SKCMchr335684028Intronnovel0.14
SKCMchr335792478Missense_MutationNAG710E0.44
STADchr335721614Missense_MutationNAR335S0.14
STADchr335708998Missense_MutationNAD275E0.16
STADchr335717347Nonsense_MutationnovelQ329*0.13
STADchr335707009Frame_Shift_DelnovelG243Vfs*100.08
STADchr335743945Missense_MutationNAP671L0.39
STADchr335681796SilentnovelG15G0.07
STADchr335737337Missense_MutationnovelQ540R0.61
STADchr335737247Missense_Mutationrs376713321R510Q0.14
STADchr335793737Missense_MutationnovelQ740E0.14
STADchr335729340Silentrs757564373S421S0.32
STADchr335744543Intronnovel0.23
STADchr335681787Frame_Shift_DelnovelE13Rfs*530.39
STADchr335743881Missense_MutationnovelT650A0.11
STADchr3356817255'UTRnovel0.47
STADchr335793940SilentnovelG807G0.52
STADchr335743890Missense_MutationnovelQ653K0.1
STADchr335707048Missense_Mutationrs766212549R254Q0.27
STADchr335707013SilentNAK242K0.43
STADchr335737200Missense_MutationNAD494E0.1
STADchr335737292Missense_MutationNAQ525R0.41
STADchr335743923Missense_Mutationrs140987024A664T0.25
STADchr335707001Missense_MutationnovelL238F0.38
STADchr335739342Missense_MutationnovelG557V0.33
STADchr335793743Missense_MutationNAY742H0.11
STADchr335792496Missense_MutationNAV716A0.23
STADchr335690131Missense_MutationNAA179V0.22R3H
STADchr335715452Missense_MutationNAQ304R0.11
UCECchr335689361Missense_MutationNAI154T0.33
UCECchr335717356Missense_Mutationrs777286095R332W0.26
UCECchr3356798385'UTRnovel0.28
UCECchr335685185Intronnovel0.18
UCECchr335690922SilentnovelR201R0.5
UCECchr335721620SilentnovelG337G0.22
UCECchr335738216Intronnovel0.38
UCECchr335793700Splice_SitenovelX728_splice0.27
UCECchr335682885Missense_MutationNAS56F0.52
UCECchr335687756SilentNAQ93Q0.24
UCECchr335715443Missense_MutationNAV301A0.23
UCECchr335721729SilentNAL374L0.42
UCECchr335739444Missense_MutationnovelS591N0.07
UCECchr335685561Intronnovel0.45
UCECchr335690129SilentnovelI178I0.52
UCECchr335684502Intronnovel0.32
UCECchr335690112Missense_MutationnovelE173K0.07R3H
UCECchr335684801Intronnovel0.42
UCECchr335707040SilentnovelI251I0.04
UCECchr3357939933'UTRnovel0.42
UCECchr335717356Missense_Mutationrs777286095R332W0.35
UCECchr3356817205'UTRnovel0.5
UCECchr335684678Intronnovel0.42
UCECchr335737285Nonsense_MutationnovelQ523*0.29
UCECchr335708993Missense_MutationnovelD274Y0.43
UCECchr335687770Missense_MutationnovelS98Y0.23
UCECchr335739573Missense_MutationnovelA634V0.25
UCECchr335684057IntronNA0.5
UCECchr335709002Nonsense_Mutationrs749154477R277*0.35
UCECchr335721738Missense_MutationNAA377T0.56
UCECchr335681767Missense_MutationnovelD6N0.21
UCECchr335684531Intronnovel0.12
UCECchr335729427Missense_MutationnovelE450D0.17
UCECchr335737217Missense_MutationnovelY500C0.28
UCECchr335684442Intronnovel0.33
UCECchr335684561Intronnovel0.39
UCECchr335681847Missense_MutationNAE32D0.38
UCECchr335744511IntronNA0.13
UCECchr3357940473'UTRnovel0.1
UCECchr335721705Missense_MutationNAD366Y0.32
UCECchr335684059Intronnovel0.12
UCECchr335707032Missense_Mutationrs761602901R249W0.12
UCECchr335721663Frame_Shift_InsnovelE352Vfs*260.15
UCECchr335729362Missense_MutationnovelL429F0.14
UCECchr335743864Missense_MutationnovelG644D0.21
UCECchr335684057IntronNA0.48
UCECchr3356797935'UTRnovel0.48
UCECchr335744489Intronnovel0.46
UCECchr335743923Missense_Mutationrs140987024A664T0.54
UCECchr335684681Intronnovel0.41
UCECchr335729457Missense_MutationnovelS460R0.44
UCECchr3356798385'UTRnovel0.39
UCECchr335684505Intronnovel0.3
UCECchr3357939623'UTRnovel0.13
UCECchr335683813Nonsense_MutationNAQ87*0.22
UCECchr335721722SilentnovelN371N0.19
UCECchr335737220Missense_MutationnovelN501S0.09
UCECchr335690135SilentnovelD180D0.37
UCECchr335729471Missense_Mutationrs202203517I465T0.42
UCECchr335715455Missense_MutationNAE305G0.33
UCECchr335684505Intronnovel0.33
UCECchr335729528Missense_MutationnovelP484Q0.6
UCECchr335793814Silentrs763705376Y765Y0.34
UCECchr3356798185'UTRnovel0.65
UCECchr335682865Missense_MutationnovelQ49H0.44
UCECchr335721674Nonsense_MutationnovelW355*0.62
UCECchr335743885Missense_Mutationrs139862817T651M0.44
UCECchr3356798385'UTRnovel0.26
UCECchr3356817215'UTRnovel0.33
UCECchr335683815Missense_MutationnovelQ87H0.47
UCECchr335685129Intronnovel0.44
UCECchr335684801Intronnovel0.26
UCECchr335684505Intronnovel0.32
UCECchr335685431Intronnovel0.13
UCECchr335739485Nonsense_MutationnovelG605*0.28
UCECchr335690898Silentrs150267871S193S0.35
UCECchr335689367Missense_MutationnovelT156I0.41
UCECchr335681715Splice_Regionnovel0.25
UCECchr335690869Missense_MutationnovelH184N0.31R3H
UCECchr335721653SilentnovelS348S0.14
UCECchr335743957Missense_MutationnovelQ675P0.31
UCECchr335685585Intronnovel0.3
UCECchr335744542Intronnovel0.34
UCECchr335793829Silentrs185867328P770P0.4
UCECchr335684237Intronnovel0.38
UCECchr335685070Intronnovel0.5
UCECchr335721724Missense_Mutationrs535145550R372H0.41
UCECchr335739318Missense_MutationnovelR549I0.05
UCECchr335684379Intronnovel0.33
UCECchr335684904Intronnovel0.25
UCECchr335685598Intronnovel0.38
UCECchr335792523Missense_MutationNAS725Y0.29
UCECchr3357940633'UTRnovel0.35
UCECchr335721816Missense_MutationnovelG403W0.68
UCECchr3356817475'UTRnovel0.29
UCECchr335685298Intronnovel0.37
UCECchr335684762Intronnovel0.12
UCECchr335685524Intronnovel0.22
UCECchr335685193Intronnovel0.41
UCECchr335793956Frame_Shift_Insnovel*813Y0.06
UCECchr335684401Intronnovel0.4
UCECchr335685178Intronnovel0.21
UCECchr335681836Missense_MutationnovelV29I0.29
UCECchr335709008Missense_MutationNAK279Q0.39
UCECchr335729382SilentNAV435V0.5
UCECchr335744497IntronNA0.58
UCECchr335684801Intronnovel0.69
UCECchr335685666Intronnovel0.31
UCECchr335739318Missense_MutationnovelR549I0.08
UCECchr335684863Intronnovel0.36
UCECchr335707071Nonsense_MutationNAE262*0.2
UCECchr335687860Missense_MutationnovelP128L0.2
UCECchr335729326Missense_MutationNAG417C0.25
UCECchr335707010Missense_MutationnovelE241D0.42
UCECchr335708993Missense_MutationnovelD274Y0.59
UCECchr335729356Missense_MutationNAP427S0.15
UCECchr335684257Intronnovel0.44
UCECchr335685133Intronnovel0.56
UCECchr335739412Silentrs773435015S580S0.48
UCECchr335685575Intronnovel0.21
UCECchr335739318Missense_MutationnovelR549I0.31
UCECchr335743965Missense_MutationnovelG678S0.09
UCECchr335793736Missense_MutationnovelQ739H0.36
UCECchr335793882Missense_MutationnovelT788N0.44
UCSchr335687866Missense_MutationnovelI130T0.4
UCSchr335737317SilentnovelQ533Q0.4
UVMchr335721669Nonsense_MutationnovelK354*0.11

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
CHOLDEL0.77780.02241
KIRCDEL0.84662.908e-53
SKCMDEL0.16080.13887
TGCTDEL0.20.08422
THYMDEL0.08940.037527

Survival Analysis
CancerP-value Q-value
THYM0.0038

Kaplan-Meier Survival Analysis

KIRC0.00069

Kaplan-Meier Survival Analysis

MESO0.022

Kaplan-Meier Survival Analysis

HNSC0.024

Kaplan-Meier Survival Analysis

BRCA0.0001

Kaplan-Meier Survival Analysis

KIRP0.0027

Kaplan-Meier Survival Analysis

PAAD0.012

Kaplan-Meier Survival Analysis

LAML0.00037

Kaplan-Meier Survival Analysis

KICH0.02

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000172995 (Gene tree)
Gene ID
10777
Gene Symbol
ARPP21
Alias
ARPP-21|TARPP|R3HDM3
Full Name
cAMP regulated phosphoprotein 21
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
155,552 bases
Position
chr3:35,638,945-35,794,496
Accession
16968
RBP type
canonical RBP
Summary
This gene encodes a cAMP-regulated phosphoprotein. The encoded protein is enriched in the caudate nucleus and cerebellar cortex. A similar protein in mouse may be involved in regulating the effects of dopamine in the basal ganglia. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Jun 2012]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000408271R3HPF01424.223.9e-1211
ENSP00000405276R3HPF01424.225.6e-1211
ENSP00000412326R3HPF01424.226e-1211
ENSP00000187397R3HPF01424.226.2e-1211
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
29581509The RNA-binding protein ARPP21 controls dendritic branching by functionally opposing the miRNA it hosts.Nat Commun2018 Mar 26Rehfeld Fdoi: 10.1038/s41467-018-03681-3.
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000462173ARPP21-228647--- (aa)--
ENST00000396481ARPP21-2021304-ENSP0000037974189 (aa)-Q9UBL0
ENST00000438577ARPP21-219590-ENSP0000040933194 (aa)-C9JTF2
ENST00000432682ARPP21-2151015-ENSP0000038975489 (aa)-Q9UBL0
ENST00000476052ARPP21-2321104--- (aa)--
ENST00000494494ARPP21-235466--- (aa)--
ENST00000461826ARPP21-227577--- (aa)--
ENST00000481854ARPP21-234837--- (aa)--
ENST00000432450ARPP21-214574-ENSP00000412341101 (aa)-C9J091
ENST00000436702ARPP21-217561-ENSP0000039772089 (aa)-Q9UBL0
ENST00000473138ARPP21-230407--- (aa)--
ENST00000396482ARPP21-2032416-ENSP0000037974289 (aa)-Q9UBL0
ENST00000425289ARPP21-210781-ENSP00000408271261 (aa)-H7C2X8
ENST00000427590ARPP21-212787-ENSP00000396116124 (aa)-H7C0P9
ENST00000438071ARPP21-2181103-ENSP0000041017189 (aa)-Q9UBL0
ENST00000414496ARPP21-206715-ENSP0000041513498 (aa)-F8WDL2
ENST00000417925ARPP21-2073086XM_005264811ENSP00000412326813 (aa)XP_005264868Q9UBL0
ENST00000446068ARPP21-222700-ENSP00000399482145 (aa)-H7C1B6
ENST00000428373ARPP21-2133150-ENSP0000041241189 (aa)-Q9UBL0
ENST00000434383ARPP21-2163124--- (aa)--
ENST00000444190ARPP21-2213182XM_006712944ENSP00000405276793 (aa)XP_006713007Q9UBL0
ENST00000476327ARPP21-233305--- (aa)--
ENST00000457165ARPP21-2262014-ENSP00000412233241 (aa)-H7C3J7
ENST00000441454ARPP21-2202880-ENSP0000040696489 (aa)-Q9UBL0
ENST00000419330ARPP21-208543-ENSP0000041300543 (aa)-C9JTX6
ENST00000463970ARPP21-229420--- (aa)--
ENST00000412048ARPP21-2042506-ENSP0000039015189 (aa)-Q9UBL0
ENST00000450234ARPP21-224611-ENSP00000411644104 (aa)-C9J5R1
ENST00000421492ARPP21-209544-ENSP0000039859832 (aa)-C9J2U3
ENST00000449196ARPP21-223657-ENSP0000040980854 (aa)-C9JQQ6
ENST00000187397ARPP21-2013433XM_011533300ENSP00000187397812 (aa)XP_011531602Q9UBL0
ENST00000474696ARPP21-231572-ENSP0000041783889 (aa)-Q9UBL0
ENST00000452563ARPP21-225620-ENSP0000039632496 (aa)-C9JD93
ENST00000413378ARPP21-205550-ENSP0000039016998 (aa)-C9JI74
ENST00000427542ARPP21-211568-ENSP0000040160289 (aa)-Q9UBL0
Gene Model
Click here to download ENSG00000172995's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000172995Echocardiography5.5540043690146E-517903301
ENSG00000172995Fibrinogen3.1530000E-005-
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000172995rs9810464335651675ANeuroticism29255261z score increase6.162EFO_0007660
ENSG00000172995rs1542212335642443TIrritable mood29500382z score decrease5.62EFO_0009594
ENSG00000172995rs1542212335642443TFeeling worry29500382unit decrease5.786EFO_0009589
ENSG00000172995rs1513475335682764THand grip strength29691431[0.0014-0.0026] unit decrease0.002EFO_0006941
ENSG00000172995rs6784162335660129AIntelligence29942086z-score increase6.052EFO_0004337
ENSG00000172995rs9811585335683104TWorry too long after an embarrassing experience29500382z score decrease7.12EFO_0009589
ENSG00000172995rs1542212335642443GDepressed affect29942085[0.0086-0.018] unit increase0.0133EFO_0003761|EFO_0004247
ENSG00000172995rs1542212335642443TNeurociticism29500382z score decrease6.75EFO_0007660
ENSG00000172995rs1542212335642443TNeuroticism29942085z score decrease6.226EFO_0007660
ENSG00000172995rs9860326335641612?Body mass index30595370EFO_0004340
ENSG00000172995rs6776685335691772TGeneral risk tolerance (MTAG)30643258[0.0052-0.01] unit increase0.0076EFO_0008579
ENSG00000172995rs13084607335736301?Gamma glutamyl transferase levels in low alcohol consumption30589442[0.013-0.03] unit decrease0.0211EFO_0004532|EFO_0007878
ENSG00000172995rs1542212335642443?Neuroticism30595370EFO_0007660
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000172995's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000172995ARPP2110093.973ENSAMEG00000017937ARPP2110093.850Ailuropoda_melanoleuca
ENSG00000172995ARPP218895.276ENSAPLG00000004808ARPP219576.705Anas_platyrhynchos
ENSG00000172995ARPP218892.126ENSACAG00000010218ARPP2110072.308Anolis_carolinensis
ENSG00000172995ARPP2110099.038ENSANAG00000035141ARPP2110098.645Aotus_nancymaae
ENSG00000172995ARPP2110094.760ENSBTAG00000007732ARPP2110094.760Bos_taurus
ENSG00000172995ARPP2110098.153ENSCJAG00000012301ARPP2110098.153Callithrix_jacchus
ENSG00000172995ARPP2110093.596ENSCAFG00000004753ARPP2110093.473Canis_familiaris
ENSG00000172995ARPP2110092.553ENSCAFG00020001655ARPP2110091.379Canis_lupus_dingo
ENSG00000172995ARPP2110091.489ENSCHIG00000014318ARPP2110089.803Capra_hircus
ENSG00000172995ARPP2110098.077ENSTSYG00000002250ARPP219996.750Carlito_syrichta
ENSG00000172995ARPP2110091.636ENSCPOG00000008780ARPP2110093.450Cavia_porcellus
ENSG00000172995ARPP2110098.153ENSCCAG00000032940ARPP2110098.153Cebus_capucinus
ENSG00000172995ARPP21100100.000ENSCATG00000032088ARPP2110099.138Cercocebus_atys
ENSG00000172995ARPP2110093.727ENSCLAG00000007764ARPP2110093.358Chinchilla_lanigera
ENSG00000172995ARPP21100100.000ENSCSAG00000009323ARPP2110094.805Chlorocebus_sabaeus
ENSG00000172995ARPP2110093.966ENSCHOG00000008383ARPP2110093.596Choloepus_hoffmanni
ENSG00000172995ARPP218895.276ENSCPBG00000013513ARPP2110079.036Chrysemys_picta_bellii
ENSG00000172995ARPP2110099.038ENSCANG00000032594ARPP2110099.015Colobus_angolensis_palliatus
ENSG00000172995ARPP2110087.516ENSCGRG00001012175Arpp219889.956Cricetulus_griseus_chok1gshd
ENSG00000172995ARPP2110087.296ENSCGRG00000010727Arpp219889.956Cricetulus_griseus_crigri
ENSG00000172995ARPP2110095.745ENSDNOG00000014858ARPP2110092.620Dasypus_novemcinctus
ENSG00000172995ARPP2110093.617ENSDORG00000001999Arpp219894.323Dipodomys_ordii
ENSG00000172995ARPP218890.551ENSETEG00000015536ARPP219078.520Echinops_telfairi
ENSG00000172995ARPP2110095.080ENSEASG00005007331ARPP2110094.711Equus_asinus_asinus
ENSG00000172995ARPP2110095.633ENSECAG00000022872ARPP2110095.633Equus_caballus
ENSG00000172995ARPP218899.213ENSEEUG00000015698ARPP218579.029Erinaceus_europaeus
ENSG00000172995ARPP219990.278ENSFCAG00000013391ARPP219991.774Felis_catus
ENSG00000172995ARPP218896.063ENSFALG00000010928ARPP2110080.751Ficedula_albicollis
ENSG00000172995ARPP2110094.681ENSFDAG00000009301ARPP2110093.481Fukomys_damarensis
ENSG00000172995ARPP218896.063ENSGALG00000043240ARPP2110078.410Gallus_gallus
ENSG00000172995ARPP218895.276ENSGAGG00000021582ARPP219978.016Gopherus_agassizii
ENSG00000172995ARPP21100100.000ENSGGOG00000009337ARPP2110099.754Gorilla_gorilla
ENSG00000172995ARPP2110095.745ENSHGLG00000001335ARPP219995.633Heterocephalus_glaber_female
ENSG00000172995ARPP2110095.745ENSHGLG00100005814ARPP219995.633Heterocephalus_glaber_male
ENSG00000172995ARPP2110094.963ENSSTOG00000008350ARPP2110094.595Ictidomys_tridecemlineatus
ENSG00000172995ARPP2110088.462ENSJJAG00000018847Arpp219891.703Jaculus_jaculus
ENSG00000172995ARPP218991.538ENSLACG00000006737ARPP219870.206Latimeria_chalumnae
ENSG00000172995ARPP219285.526ENSLOCG00000004751ARPP2110068.052Lepisosteus_oculatus
ENSG00000172995ARPP2110093.481ENSLAFG00000005797ARPP2110093.112Loxodonta_africana
ENSG00000172995ARPP21100100.000ENSMFAG00000041762ARPP2110099.385Macaca_fascicularis
ENSG00000172995ARPP21100100.000ENSMMUG00000015959ARPP2110099.385Macaca_mulatta
ENSG00000172995ARPP21100100.000ENSMNEG00000044015ARPP2110099.384Macaca_nemestrina
ENSG00000172995ARPP21100100.000ENSMLEG00000031579ARPP2110099.262Mandrillus_leucophaeus
ENSG00000172995ARPP218896.063ENSMGAG00000011901ARPP2110080.657Meleagris_gallopavo
ENSG00000172995ARPP2110089.362ENSMAUG00000021700Arpp219891.266Mesocricetus_auratus
ENSG00000172995ARPP2110097.291ENSMICG00000049108ARPP2110097.291Microcebus_murinus
ENSG00000172995ARPP219791.176ENSMODG00000002309ARPP2110068.575Monodelphis_domestica
ENSG00000172995ARPP219988.194MGP_CAROLIEiJ_G0032760Arpp2110091.756Mus_caroli
ENSG00000172995ARPP219988.194ENSMUSG00000032503Arpp2110092.115Mus_musculus
ENSG00000172995ARPP219988.889MGP_PahariEiJ_G0015627Arpp2110092.115Mus_pahari
ENSG00000172995ARPP219988.194MGP_SPRETEiJ_G0033908Arpp2110092.473Mus_spretus
ENSG00000172995ARPP2110091.579ENSMPUG00000002971ARPP2110087.264Mustela_putorius_furo
ENSG00000172995ARPP2110093.719ENSMLUG00000013530ARPP2110093.596Myotis_lucifugus
ENSG00000172995ARPP21100100.000ENSNLEG00000004823ARPP2110095.941Nomascus_leucogenys
ENSG00000172995ARPP2110093.617ENSODEG00000004233ARPP2110092.686Octodon_degus
ENSG00000172995ARPP219985.417ENSOANG00000001369ARPP2110078.213Ornithorhynchus_anatinus
ENSG00000172995ARPP2110090.791ENSOCUG00000009828ARPP2110089.256Oryctolagus_cuniculus
ENSG00000172995ARPP2110095.326ENSOGAG00000009701ARPP2110095.203Otolemur_garnettii
ENSG00000172995ARPP2110091.749ENSOARG00000016371ARPP2110091.502Ovis_aries
ENSG00000172995ARPP21100100.000ENSPPAG00000032910ARPP2110099.877Pan_paniscus
ENSG00000172995ARPP2110094.681ENSPPRG00000006681ARPP2110092.128Panthera_pardus
ENSG00000172995ARPP2110094.681ENSPTIG00000005697ARPP2110091.882Panthera_tigris_altaica
ENSG00000172995ARPP21100100.000ENSPTRG00000014736ARPP2110099.754Pan_troglodytes
ENSG00000172995ARPP21100100.000ENSPANG00000009589ARPP2110099.139Papio_anubis
ENSG00000172995ARPP218984.058ENSPKIG00000010891ARPP219961.235Paramormyrops_kingsleyae
ENSG00000172995ARPP218895.276ENSPSIG00000009255ARPP2110079.440Pelodiscus_sinensis
ENSG00000172995ARPP2110088.793ENSPEMG00000009709Arpp2110088.793Peromyscus_maniculatus_bairdii
ENSG00000172995ARPP219880.986ENSPCIG00000010648ARPP2110074.938Phascolarctos_cinereus
ENSG00000172995ARPP21100100.000ENSPPYG00000014027ARPP2110095.972Pongo_abelii
ENSG00000172995ARPP218898.425ENSPCAG00000011013ARPP219285.597Procavia_capensis
ENSG00000172995ARPP2110099.038ENSPCOG00000018365ARPP2110097.291Propithecus_coquereli
ENSG00000172995ARPP2110090.764ENSPVAG00000015987ARPP2110090.394Pteropus_vampyrus
ENSG00000172995ARPP2110087.500ENSRNOG00000008919Arpp2110087.069Rattus_norvegicus
ENSG00000172995ARPP2110098.148ENSRBIG00000004058ARPP2110098.680Rhinopithecus_bieti
ENSG00000172995ARPP2110099.038ENSRROG00000037466ARPP2110098.647Rhinopithecus_roxellana
ENSG00000172995ARPP2110098.522ENSSBOG00000029427ARPP2110098.522Saimiri_boliviensis_boliviensis
ENSG00000172995ARPP2110078.723ENSSHAG00000000756-9873.052Sarcophilus_harrisii
ENSG00000172995ARPP218783.333ENSSFOG00015021262ARPP2110056.131Scleropages_formosus
ENSG00000172995ARPP2110088.372ENSSARG00000007992ARPP218989.759Sorex_araneus
ENSG00000172995ARPP218894.531ENSSPUG00000007365ARPP2110076.763Sphenodon_punctatus
ENSG00000172995ARPP218993.846ENSTGUG00000001697ARPP2110080.704Taeniopygia_guttata
ENSG00000172995ARPP2110095.349ENSTBEG00000003651ARPP217095.385Tupaia_belangeri
ENSG00000172995ARPP2110086.047ENSTTRG00000003094ARPP218092.427Tursiops_truncatus
ENSG00000172995ARPP2110095.633ENSUMAG00000006519ARPP2110095.633Ursus_maritimus
ENSG00000172995ARPP219295.679ENSVPAG00000012573ARPP219295.679Vicugna_pacos
ENSG00000172995ARPP2110093.719ENSVVUG00000021975ARPP2110093.596Vulpes_vulpes
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003674molecular_function-NDFunction
GO:0003676nucleic acid binding-IEAFunction
GO:0005516calmodulin binding-IEAFunction
GO:0005575cellular_component-NDComponent
GO:0005737cytoplasm-IEAComponent
GO:0008150biological_process-NDProcess
GO:0034605cellular response to heat-IEAProcess
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