Cancer | Chr | Position | Mutation Type | dbSNP | Protein-change | Allele Freq | RBD |
---|---|---|---|---|---|---|---|
BLCA | |||||||
BRCA | |||||||
BRCA | |||||||
BRCA | |||||||
BRCA | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
COAD | |||||||
ESCA | |||||||
ESCA | |||||||
ESCA | |||||||
ESCA | |||||||
HNSC | |||||||
HNSC | |||||||
KIRC | |||||||
KIRC | |||||||
KIRP | |||||||
LIHC | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
LUSC | |||||||
READ | |||||||
SKCM | |||||||
SKCM | |||||||
SKCM | |||||||
STAD | |||||||
STAD | |||||||
THCA | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UCEC | |||||||
UVM |
Cancer | Type | Freq | Q-value |
---|---|---|---|
ESCA | |||
PAAD | |||
PRAD | |||
READ | |||
SARC |
Cancer | P-value | Q-value |
---|---|---|
KIRC | ||
MESO | ||
ACC | ||
PRAD | ||
LUSC | ||
PAAD | ||
LAML | ||
LIHC | ||
OV |
Protein ID | Domain | Pfam ID | E-value | Domain number | Total number |
---|---|---|---|---|---|
ENSP00000310596 | LSM | PF01423.22 | 7.3e-15 | 1 | 1 |
ENSP00000430021 | LSM | PF01423.22 | 8.9e-05 | 1 | 1 |
Transcript ID | Name | Length | RefSeq ID | Protein ID | Length | RefSeq ID | UniportKB ID |
---|---|---|---|---|---|---|---|
ENST00000520286 | LSM1-202 | 776 | NR_045493 | - | - (aa) | - | - |
ENST00000522515 | LSM1-204 | 1568 | - | - | - (aa) | - | - |
ENST00000523511 | LSM1-205 | 700 | - | ENSP00000428307 | 44 (aa) | - | E5RJ47 |
ENST00000311351 | LSM1-201 | 1147 | - | ENSP00000310596 | 133 (aa) | - | O15116 |
ENST00000520755 | LSM1-203 | 975 | - | ENSP00000430021 | 44 (aa) | - | E5RH18 |
Pathway ID | Pathway Name | Source |
---|---|---|
hsa03018 | RNA degradation | KEGG |
ensgID | Trait | pValue | Pubmed ID |
---|---|---|---|
ENSG00000175324 | Schizophrenia | 1E-10 | 22037555 |
ensgID | SNP | Chromosome | Position | SNP-risk | Trait | PubmedID | 95% CI | Or or BEAT | EFO ID |
---|---|---|---|---|---|---|---|---|---|
ENSG00000175324 | rs5891007 | 8 | 38163493 | ? | Schizophrenia | 28991256 | [1.07-1.15] | 1.1086475 | EFO_0000692 |
ENSG00000175324 | rs16887244 | 8 | 38173827 | ? | Schizophrenia | 22037555 | [1.14-1.27] | 1.19 | EFO_0000692 |
ENSG00000175324 | rs145151767 | 8 | 38167993 | ? | Systolic blood pressure | 30595370 | EFO_0006335 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Paralog | Gene Symbol | Coverage | Identiy |
---|---|---|---|---|---|---|---|
ENSG00000175324 | LSM1 | 65 | 34.091 | ENSG00000128534 | LSM8 | 99 | 33.333 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Ortholog | Gene Symbol | Coverage | Identiy | Species |
---|---|---|---|---|---|---|---|---|
ENSG00000175324 | LSM1 | 100 | 85.714 | ENSAPOG00000010833 | lsm1 | 100 | 85.714 | Acanthochromis_polyacanthus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSAMEG00000011141 | LSM1 | 100 | 100.000 | Ailuropoda_melanoleuca |
ENSG00000175324 | LSM1 | 89 | 89.744 | ENSACIG00000019593 | lsm1 | 64 | 92.208 | Amphilophus_citrinellus |
ENSG00000175324 | LSM1 | 100 | 85.714 | ENSAOCG00000017096 | lsm1 | 100 | 85.714 | Amphiprion_ocellaris |
ENSG00000175324 | LSM1 | 100 | 85.714 | ENSAOCG00000017997 | - | 100 | 85.714 | Amphiprion_ocellaris |
ENSG00000175324 | LSM1 | 100 | 85.714 | ENSAPEG00000011669 | lsm1 | 100 | 85.714 | Amphiprion_percula |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSATEG00000022266 | lsm1 | 100 | 84.211 | Anabas_testudineus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSANAG00000027785 | LSM1 | 100 | 100.000 | Aotus_nancymaae |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSACLG00000011400 | lsm1 | 100 | 84.211 | Astatotilapia_calliptera |
ENSG00000175324 | LSM1 | 100 | 86.466 | ENSAMXG00000005441 | lsm1 | 100 | 86.466 | Astyanax_mexicanus |
ENSG00000175324 | LSM1 | 100 | 99.248 | ENSBTAG00000001612 | LSM1 | 100 | 99.248 | Bos_taurus |
ENSG00000175324 | LSM1 | 86 | 71.053 | WBGene00003076 | lsm-1 | 73 | 58.065 | Caenorhabditis_elegans |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSCJAG00000048015 | LSM1 | 100 | 100.000 | Callithrix_jacchus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSCAFG00000006113 | LSM1 | 100 | 100.000 | Canis_familiaris |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSCAFG00020001822 | LSM1 | 100 | 100.000 | Canis_lupus_dingo |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSCHIG00000013194 | LSM1 | 100 | 100.000 | Capra_hircus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSTSYG00000010394 | LSM1 | 100 | 100.000 | Carlito_syrichta |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSCPOG00000032671 | LSM1 | 100 | 100.000 | Cavia_porcellus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSCCAG00000037171 | LSM1 | 100 | 100.000 | Cebus_capucinus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSCATG00000020377 | LSM1 | 100 | 100.000 | Cercocebus_atys |
ENSG00000175324 | LSM1 | 100 | 98.496 | ENSCLAG00000001137 | LSM1 | 100 | 98.496 | Chinchilla_lanigera |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSCSAG00000015485 | LSM1 | 100 | 100.000 | Chlorocebus_sabaeus |
ENSG00000175324 | LSM1 | 100 | 99.248 | ENSCHOG00000006030 | LSM1 | 100 | 99.248 | Choloepus_hoffmanni |
ENSG00000175324 | LSM1 | 95 | 88.976 | ENSCPBG00000006569 | LSM1 | 86 | 88.976 | Chrysemys_picta_bellii |
ENSG00000175324 | LSM1 | 89 | 82.051 | ENSCING00000013536 | - | 99 | 67.424 | Ciona_intestinalis |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSCANG00000019173 | LSM1 | 100 | 100.000 | Colobus_angolensis_palliatus |
ENSG00000175324 | LSM1 | 100 | 99.248 | ENSCGRG00001024560 | - | 100 | 99.248 | Cricetulus_griseus_chok1gshd |
ENSG00000175324 | LSM1 | 70 | 93.548 | ENSCGRG00001002259 | - | 97 | 81.982 | Cricetulus_griseus_chok1gshd |
ENSG00000175324 | LSM1 | 100 | 99.248 | ENSCGRG00000006554 | - | 100 | 99.248 | Cricetulus_griseus_crigri |
ENSG00000175324 | LSM1 | 70 | 93.548 | ENSCGRG00000013603 | - | 97 | 81.982 | Cricetulus_griseus_crigri |
ENSG00000175324 | LSM1 | 100 | 82.707 | ENSCSEG00000008319 | lsm1 | 92 | 82.707 | Cynoglossus_semilaevis |
ENSG00000175324 | LSM1 | 100 | 83.459 | ENSCSEG00000010570 | lsm1 | 92 | 83.459 | Cynoglossus_semilaevis |
ENSG00000175324 | LSM1 | 100 | 83.459 | ENSCVAG00000003871 | lsm1 | 100 | 83.459 | Cyprinodon_variegatus |
ENSG00000175324 | LSM1 | 100 | 85.714 | ENSDARG00000043177 | lsm1 | 100 | 85.714 | Danio_rerio |
ENSG00000175324 | LSM1 | 100 | 93.985 | ENSDNOG00000030989 | - | 100 | 93.985 | Dasypus_novemcinctus |
ENSG00000175324 | LSM1 | 100 | 99.248 | ENSDNOG00000032911 | - | 100 | 99.248 | Dasypus_novemcinctus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSDNOG00000046387 | - | 100 | 100.000 | Dasypus_novemcinctus |
ENSG00000175324 | LSM1 | 89 | 79.832 | ENSDNOG00000046620 | - | 100 | 79.832 | Dasypus_novemcinctus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSDORG00000028172 | Lsm1 | 100 | 100.000 | Dipodomys_ordii |
ENSG00000175324 | LSM1 | 93 | 63.710 | FBgn0261067 | LSm1 | 91 | 63.710 | Drosophila_melanogaster |
ENSG00000175324 | LSM1 | 100 | 98.496 | ENSEASG00005016677 | LSM1 | 100 | 98.496 | Equus_asinus_asinus |
ENSG00000175324 | LSM1 | 100 | 98.496 | ENSECAG00000010461 | LSM1 | 100 | 98.496 | Equus_caballus |
ENSG00000175324 | LSM1 | 89 | 97.436 | ENSEEUG00000015181 | LSM1 | 100 | 69.925 | Erinaceus_europaeus |
ENSG00000175324 | LSM1 | 89 | 97.436 | ENSELUG00000023374 | lsm1 | 100 | 84.211 | Esox_lucius |
ENSG00000175324 | LSM1 | 100 | 86.466 | ENSELUG00000002322 | lsm1 | 100 | 86.466 | Esox_lucius |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSFCAG00000039335 | LSM1 | 100 | 100.000 | Felis_catus |
ENSG00000175324 | LSM1 | 89 | 94.915 | ENSFALG00000006723 | LSM1 | 100 | 94.915 | Ficedula_albicollis |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSFDAG00000007658 | LSM1 | 100 | 100.000 | Fukomys_damarensis |
ENSG00000175324 | LSM1 | 100 | 83.459 | ENSFHEG00000009556 | lsm1 | 100 | 83.459 | Fundulus_heteroclitus |
ENSG00000175324 | LSM1 | 100 | 83.459 | ENSGMOG00000016651 | lsm1 | 98 | 83.459 | Gadus_morhua |
ENSG00000175324 | LSM1 | 100 | 93.233 | ENSGALG00000003245 | LSM1 | 100 | 93.233 | Gallus_gallus |
ENSG00000175324 | LSM1 | 100 | 83.459 | ENSGAFG00000011355 | lsm1 | 100 | 83.459 | Gambusia_affinis |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSGACG00000011763 | lsm1 | 98 | 84.211 | Gasterosteus_aculeatus |
ENSG00000175324 | LSM1 | 100 | 95.489 | ENSGAGG00000024065 | LSM1 | 100 | 95.489 | Gopherus_agassizii |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSGGOG00000022658 | LSM1 | 100 | 100.000 | Gorilla_gorilla |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSHBUG00000010897 | lsm1 | 100 | 84.211 | Haplochromis_burtoni |
ENSG00000175324 | LSM1 | 100 | 79.699 | ENSHGLG00000017574 | - | 100 | 79.699 | Heterocephalus_glaber_female |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSHGLG00000005711 | LSM1 | 100 | 100.000 | Heterocephalus_glaber_female |
ENSG00000175324 | LSM1 | 100 | 79.699 | ENSHGLG00100012152 | - | 100 | 79.699 | Heterocephalus_glaber_male |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSHGLG00100017660 | LSM1 | 100 | 100.000 | Heterocephalus_glaber_male |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSHCOG00000017233 | lsm1 | 100 | 84.211 | Hippocampus_comes |
ENSG00000175324 | LSM1 | 100 | 84.962 | ENSIPUG00000002312 | LSM1 | 100 | 84.962 | Ictalurus_punctatus |
ENSG00000175324 | LSM1 | 89 | 97.436 | ENSSTOG00000026870 | LSM1 | 94 | 100.000 | Ictidomys_tridecemlineatus |
ENSG00000175324 | LSM1 | 100 | 98.496 | ENSJJAG00000014605 | - | 100 | 98.496 | Jaculus_jaculus |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSKMAG00000003016 | lsm1 | 100 | 84.211 | Kryptolebias_marmoratus |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSLBEG00000022352 | lsm1 | 100 | 84.211 | Labrus_bergylta |
ENSG00000175324 | LSM1 | 89 | 90.678 | ENSLACG00000010947 | LSM1 | 98 | 90.678 | Latimeria_chalumnae |
ENSG00000175324 | LSM1 | 100 | 94.737 | ENSLOCG00000015149 | lsm1 | 100 | 94.737 | Lepisosteus_oculatus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSLAFG00000003534 | LSM1 | 100 | 100.000 | Loxodonta_africana |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSMFAG00000032661 | LSM1 | 100 | 100.000 | Macaca_fascicularis |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSMLEG00000034535 | LSM1 | 100 | 100.000 | Mandrillus_leucophaeus |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSMAMG00000007464 | lsm1 | 100 | 84.211 | Mastacembelus_armatus |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSMZEG00005010321 | lsm1 | 100 | 84.211 | Maylandia_zebra |
ENSG00000175324 | LSM1 | 100 | 93.233 | ENSMGAG00000002125 | LSM1 | 100 | 93.233 | Meleagris_gallopavo |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSMICG00000030726 | LSM1 | 100 | 100.000 | Microcebus_murinus |
ENSG00000175324 | LSM1 | 100 | 99.248 | ENSMOCG00000022817 | Lsm1 | 100 | 99.248 | Microtus_ochrogaster |
ENSG00000175324 | LSM1 | 100 | 84.962 | ENSMMOG00000015466 | lsm1 | 100 | 84.962 | Mola_mola |
ENSG00000175324 | LSM1 | 100 | 97.744 | ENSMODG00000010732 | - | 100 | 97.744 | Monodelphis_domestica |
ENSG00000175324 | LSM1 | 89 | 89.744 | ENSMALG00000001478 | lsm1 | 82 | 92.208 | Monopterus_albus |
ENSG00000175324 | LSM1 | 100 | 97.744 | MGP_CAROLIEiJ_G0030930 | Lsm1 | 100 | 97.744 | Mus_caroli |
ENSG00000175324 | LSM1 | 100 | 97.744 | ENSMUSG00000037296 | Lsm1 | 100 | 97.744 | Mus_musculus |
ENSG00000175324 | LSM1 | 100 | 97.744 | MGP_PahariEiJ_G0021400 | Lsm1 | 100 | 97.744 | Mus_pahari |
ENSG00000175324 | LSM1 | 100 | 97.744 | MGP_SPRETEiJ_G0032049 | Lsm1 | 100 | 97.744 | Mus_spretus |
ENSG00000175324 | LSM1 | 100 | 99.248 | ENSMPUG00000009883 | LSM1 | 100 | 99.248 | Mustela_putorius_furo |
ENSG00000175324 | LSM1 | 100 | 99.248 | ENSMLUG00000003734 | LSM1 | 100 | 99.248 | Myotis_lucifugus |
ENSG00000175324 | LSM1 | 100 | 99.248 | ENSNGAG00000003753 | Lsm1 | 100 | 99.248 | Nannospalax_galili |
ENSG00000175324 | LSM1 | 89 | 89.744 | ENSNBRG00000017370 | lsm1 | 66 | 92.208 | Neolamprologus_brichardi |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSNLEG00000029390 | LSM1 | 100 | 100.000 | Nomascus_leucogenys |
ENSG00000175324 | LSM1 | 100 | 97.744 | ENSMEUG00000014077 | LSM1 | 100 | 97.744 | Notamacropus_eugenii |
ENSG00000175324 | LSM1 | 88 | 94.017 | ENSOPRG00000000333 | LSM1 | 100 | 94.017 | Ochotona_princeps |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSODEG00000004834 | LSM1 | 100 | 100.000 | Octodon_degus |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSONIG00000010782 | lsm1 | 100 | 84.211 | Oreochromis_niloticus |
ENSG00000175324 | LSM1 | 100 | 96.992 | ENSOANG00000003256 | LSM1 | 100 | 96.992 | Ornithorhynchus_anatinus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSOCUG00000015399 | LSM1 | 100 | 100.000 | Oryctolagus_cuniculus |
ENSG00000175324 | LSM1 | 100 | 85.714 | ENSORLG00000030288 | lsm1 | 100 | 85.714 | Oryzias_latipes |
ENSG00000175324 | LSM1 | 100 | 85.714 | ENSORLG00020003941 | lsm1 | 100 | 85.714 | Oryzias_latipes_hni |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSORLG00020006213 | - | 86 | 84.211 | Oryzias_latipes_hni |
ENSG00000175324 | LSM1 | 100 | 85.714 | ENSORLG00015018350 | lsm1 | 100 | 85.714 | Oryzias_latipes_hsok |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSOMEG00000012454 | lsm1 | 100 | 84.211 | Oryzias_melastigma |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSOGAG00000015161 | LSM1 | 100 | 100.000 | Otolemur_garnettii |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSOARG00000001317 | LSM1 | 100 | 100.000 | Ovis_aries |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSPPAG00000032279 | LSM1 | 100 | 100.000 | Pan_paniscus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSPPRG00000014172 | - | 100 | 100.000 | Panthera_pardus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSPTIG00000010289 | LSM1 | 100 | 100.000 | Panthera_tigris_altaica |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSPTRG00000020169 | LSM1 | 100 | 100.000 | Pan_troglodytes |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSPANG00000008814 | LSM1 | 100 | 100.000 | Papio_anubis |
ENSG00000175324 | LSM1 | 100 | 90.226 | ENSPKIG00000001839 | lsm1 | 100 | 90.226 | Paramormyrops_kingsleyae |
ENSG00000175324 | LSM1 | 100 | 82.707 | ENSPKIG00000019409 | LSM1 | 99 | 82.707 | Paramormyrops_kingsleyae |
ENSG00000175324 | LSM1 | 98 | 89.231 | ENSPSIG00000012563 | LSM1 | 99 | 89.231 | Pelodiscus_sinensis |
ENSG00000175324 | LSM1 | 89 | 89.744 | ENSPMGG00000022999 | lsm1 | 73 | 92.208 | Periophthalmus_magnuspinnatus |
ENSG00000175324 | LSM1 | 85 | 80.531 | ENSPMAG00000002671 | lsm1 | 100 | 80.531 | Petromyzon_marinus |
ENSG00000175324 | LSM1 | 100 | 96.241 | ENSPCIG00000008880 | LSM1 | 100 | 96.241 | Phascolarctos_cinereus |
ENSG00000175324 | LSM1 | 100 | 83.459 | ENSPFOG00000016029 | lsm1 | 100 | 83.459 | Poecilia_formosa |
ENSG00000175324 | LSM1 | 100 | 83.459 | ENSPLAG00000007879 | lsm1 | 100 | 83.459 | Poecilia_latipinna |
ENSG00000175324 | LSM1 | 100 | 83.459 | ENSPMEG00000023550 | lsm1 | 100 | 83.459 | Poecilia_mexicana |
ENSG00000175324 | LSM1 | 100 | 83.459 | ENSPREG00000009574 | lsm1 | 100 | 83.459 | Poecilia_reticulata |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSPPYG00000018521 | LSM1 | 100 | 100.000 | Pongo_abelii |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSPCOG00000020901 | - | 100 | 100.000 | Propithecus_coquereli |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSPVAG00000006016 | LSM1 | 100 | 100.000 | Pteropus_vampyrus |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSPNYG00000018067 | lsm1 | 100 | 84.211 | Pundamilia_nyererei |
ENSG00000175324 | LSM1 | 100 | 85.714 | ENSPNAG00000013707 | lsm1 | 100 | 85.714 | Pygocentrus_nattereri |
ENSG00000175324 | LSM1 | 100 | 97.744 | ENSRNOG00000015375 | Lsm1 | 100 | 97.744 | Rattus_norvegicus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSRBIG00000027449 | LSM1 | 100 | 100.000 | Rhinopithecus_bieti |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSRROG00000036074 | LSM1 | 100 | 100.000 | Rhinopithecus_roxellana |
ENSG00000175324 | LSM1 | 100 | 97.744 | ENSSHAG00000017260 | LSM1 | 100 | 97.744 | Sarcophilus_harrisii |
ENSG00000175324 | LSM1 | 100 | 91.729 | ENSSFOG00015019528 | lsm1 | 100 | 91.729 | Scleropages_formosus |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSSMAG00000004930 | lsm1 | 100 | 84.211 | Scophthalmus_maximus |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSSDUG00000021823 | lsm1 | 100 | 84.211 | Seriola_dumerili |
ENSG00000175324 | LSM1 | 100 | 84.211 | ENSSLDG00000012154 | lsm1 | 100 | 84.211 | Seriola_lalandi_dorsalis |
ENSG00000175324 | LSM1 | 100 | 95.489 | ENSSPUG00000014878 | LSM1 | 100 | 95.489 | Sphenodon_punctatus |
ENSG00000175324 | LSM1 | 100 | 84.962 | ENSSPAG00000020548 | lsm1 | 100 | 84.962 | Stegastes_partitus |
ENSG00000175324 | LSM1 | 100 | 98.496 | ENSSSCG00000039058 | LSM1 | 100 | 98.496 | Sus_scrofa |
ENSG00000175324 | LSM1 | 100 | 94.737 | ENSTGUG00000004793 | LSM1 | 100 | 94.737 | Taeniopygia_guttata |
ENSG00000175324 | LSM1 | 100 | 86.466 | ENSTRUG00000025239 | lsm1 | 100 | 86.466 | Takifugu_rubripes |
ENSG00000175324 | LSM1 | 100 | 86.466 | ENSTNIG00000004055 | lsm1 | 100 | 86.466 | Tetraodon_nigroviridis |
ENSG00000175324 | LSM1 | 88 | 97.436 | ENSTBEG00000015884 | LSM1 | 100 | 97.436 | Tupaia_belangeri |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSTTRG00000004482 | LSM1 | 100 | 100.000 | Tursiops_truncatus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSUAMG00000004103 | LSM1 | 100 | 100.000 | Ursus_americanus |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSUMAG00000009132 | LSM1 | 100 | 100.000 | Ursus_maritimus |
ENSG00000175324 | LSM1 | 89 | 94.872 | ENSVPAG00000011593 | LSM1 | 100 | 98.701 | Vicugna_pacos |
ENSG00000175324 | LSM1 | 89 | 61.538 | ENSVVUG00000014880 | - | 91 | 69.767 | Vulpes_vulpes |
ENSG00000175324 | LSM1 | 100 | 100.000 | ENSVVUG00000020191 | LSM1 | 100 | 100.000 | Vulpes_vulpes |
ENSG00000175324 | LSM1 | 100 | 92.701 | ENSXETG00000009004 | lsm1 | 100 | 92.701 | Xenopus_tropicalis |
ENSG00000175324 | LSM1 | 100 | 82.707 | ENSXCOG00000015631 | lsm1 | 100 | 82.707 | Xiphophorus_couchianus |
ENSG00000175324 | LSM1 | 100 | 82.707 | ENSXMAG00000026637 | lsm1 | 100 | 82.707 | Xiphophorus_maculatus |
Go ID | Go_term | PubmedID | Evidence | Category |
---|---|---|---|---|
GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | 21873635. | IBA | Process |
GO:0000339 | RNA cap binding | 21873635. | IBA | Function |
GO:0000375 | RNA splicing, via transesterification reactions | 10369684. | TAS | Process |
GO:0000932 | P-body | 21873635. | IBA | Component |
GO:0003723 | RNA binding | 22658674.22681889. | HDA | Function |
GO:0003723 | RNA binding | 21873635. | IBA | Function |
GO:0003729 | mRNA binding | - | IEA | Function |
GO:0005515 | protein binding | 15231747.18172165.19628699.20584987.20852261.25416956.26871637. | IPI | Function |
GO:0005634 | nucleus | 18559850. | IDA | Component |
GO:0005737 | cytoplasm | 18559850. | IDA | Component |
GO:0005829 | cytosol | - | TAS | Component |
GO:0006397 | mRNA processing | - | IEA | Process |
GO:0008380 | RNA splicing | 10369684. | TAS | Process |
GO:0016070 | RNA metabolic process | 21873635. | IBA | Process |
GO:0019827 | stem cell population maintenance | - | IEA | Process |
GO:0030424 | axon | - | IEA | Component |
GO:0030425 | dendrite | - | IEA | Component |
GO:0036002 | pre-mRNA binding | - | IEA | Function |
GO:0043025 | neuronal cell body | - | IEA | Component |
GO:0043928 | exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay | - | TAS | Process |
GO:0045665 | negative regulation of neuron differentiation | - | IEA | Process |
GO:0071044 | histone mRNA catabolic process | 18172165. | IMP | Process |
GO:1990124 | messenger ribonucleoprotein complex | - | IEA | Component |
GO:1990726 | Lsm1-7-Pat1 complex | 21873635. | IBA | Component |