EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Cancer associated literatures

PID	Title	Article	Time	Author	Doi
26282171	TIF1γ Suppresses Tumor Progression by Regulating Mitotic Checkpoints and Chromosomal Stability.	Cancer Res	2015 Oct 15	Pommier RM	doi: 10.1158/0008-5472.CAN-14-3426
24954480	Reduced expression of transcriptional intermediary factor 1 gamma promotes metastasis and indicates poor prognosis of hepatocellular carcinoma.	Hepatology	2014 Nov	Ding ZY	doi: 10.1002/hep.27273
30261900	Circular RNA hsa_circ_0008305 (circPTK2) inhibits TGF-β-induced epithelial-mesenchymal transition and metastasis by controlling TIF1γ in non-small cell lung cancer.	Mol Cancer	2018 Sep 27	Wang L	doi: 10.1186/s12943-018-0889-7.
27430247	SnoN suppresses TGF-β-induced epithelial-mesenchymal transition and invasion of bladder cancer in a TIF1γ-dependent manner.	Oncol Rep	2016 Sep	Yin X	doi: 10.3892/or.2016.4939
23676978	[Association of mutation and methylation in the promoter region of TIF1γ with non-small cell lung cancer].	Zhongguo Fei Ai Za Zhi	2013 May	Wang L	doi: 10.3779/j.issn.1009-3419.2013.05.02.
25961934	Repression of TIF1γ by SOX2 promotes TGF-β-induced epithelial-mesenchymal transition in non-small-cell lung cancer.	Oncogene	2016 Feb 18	Wang L	doi: 10.1038/onc.2015.141
24037894	Most patients with cancer-associated dermatomyositis have antibodies to nuclear matrix protein NXP-2 or transcription intermediary factor 1γ.	Arthritis Rheum	2013 Nov	Fiorentino DF	doi: 10.1002/art.38093.
29149307	Tumour TIF1 mutations and loss of heterozygosity related to cancer-associated myositis.	Rheumatology (Oxford)	2018 Feb 1	Pinal-Fernandez I	doi: 10.1093/rheumatology/kex413.
28704599	Association of Anti-Transcription Intermediary Factor 1γ Antibodies With Paraneoplastic Rheumatic Syndromes Other Than Dermatomyositis.	Arthritis Care Res (Hoboken)	2018 Apr	Venalis P	doi: 10.1002/acr.23325.

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Protein-change	Allele Freq
ACC	chr1	114405519	Nonsense_Mutation	novel	E887*	0.67
BLCA	chr1	114399513	Missense_Mutation	novel	D1022H	0.17
BLCA	chr1	114405341	Intron	novel		0.46
BLCA	chr1	114427805	Silent	novel	F415F	0.15
BLCA	chr1	114433708	Missense_Mutation	NA	Q317E	0.32
BLCA	chr1	114397963	Missense_Mutation	novel	D1050H	0.15
BLCA	chr1	114424719	Missense_Mutation	novel	G578R	0.43
BLCA	chr1	114427891	Missense_Mutation	novel	V387L	0.07
BRCA	chr1	114427259	Silent	NA	R446R	0.2
BRCA	chr1	114424633	Silent	rs533295381	S606S	0.09
BRCA	chr1	114397949	Missense_Mutation	novel	I1054M	0.06
BRCA	chr1	114421628	Silent	novel	N623N	0.09
BRCA	chr1	114401427	Nonsense_Mutation	NA	E977*	0.35
BRCA	chr1	114401406	Missense_Mutation	novel	E984K	0.05
BRCA	chr1	114425650	Silent	novel	G498G	0.04
BRCA	chr1	114410244	Missense_Mutation	novel	Q712K	0.04
BRCA	chr1	114401433	Missense_Mutation	NA	C975R	0.24
BRCA	chr1	114397842	Nonsense_Mutation	NA	Q1064*	0.31
BRCA	chr1	114421484	Silent	novel	V671V	0.06
CESC	chr1	114393626	3'UTR	novel		0.41
CESC	chr1	114393134	3'UTR	novel		0.13
CESC	chr1	114420418	Intron	NA		0.32
CESC	chr1	114396588	3'UTR	novel		0.46
CESC	chr1	114399571	Silent	novel	D1002D	0.38
CESC	chr1	114394652	3'UTR	novel		1
CESC	chr1	114397669	Missense_Mutation	NA	E1121D	0.39
CESC	chr1	114394341	3'UTR	novel		0.18
CESC	chr1	114399498	Missense_Mutation	novel	D1027N	0.34
CESC	chr1	114393201	3'UTR	novel		0.49
CESC	chr1	114393521	3'UTR	novel		0.54
COAD	chr1	114405394	Intron	novel		0.34
COAD	chr1	114405585	Nonsense_Mutation	NA	R865*	0.31
COAD	chr1	114420451	Intron	novel		0.14
COAD	chr1	114430809	Frame_Shift_Ins	novel	*Q382Tfs20**	0.12
COAD	chr1	114430799	Missense_Mutation	novel	E385V	0.33
COAD	chr1	114402788	Missense_Mutation	rs371685549	A955V	0.22
COAD	chr1	114463455	Missense_Mutation	novel	K249N	0.37
COAD	chr1	114399596	Missense_Mutation	NA	Y994C	0.39
COAD	chr1	114405492	Missense_Mutation	novel	G896R	0.44
COAD	chr1	114397731	Missense_Mutation	novel	V1101I	0.13
COAD	chr1	114433622	Silent	NA	Q345Q	0.41
COAD	chr1	114401460	Missense_Mutation	NA	C966R	0.1
COAD	chr1	114433628	Silent	rs775641525	Q343Q	0.12
COAD	chr1	114433679	Silent	novel	L326L	0.29
COAD	chr1	114430876	Missense_Mutation	novel	E359D	0.28
COAD	chr1	114433673	Silent	NA	A328A	0.15
COAD	chr1	114405471	Missense_Mutation	rs748568840	E903K	0.1
COAD	chr1	114421568	Silent	rs768838621	T643T	0.05
COAD	chr1	114410281	Frame_Shift_Ins	novel	*L700Efs5**	0.07
COAD	chr1	114421569	Missense_Mutation	rs760094981	T643M	0.23
COAD	chr1	114463212	Missense_Mutation	NA	R272H	0.16
ESCA	chr1	114464379	Missense_Mutation	novel	I179R	0.18
ESCA	chr1	114397961	Silent	novel	D1050D	0.12
ESCA	chr1	114397429	3'UTR	novel		0.71
GBM	chr1	114402788	Missense_Mutation	rs371685549	A955V	0.44
GBM	chr1	114463111	Missense_Mutation	novel	E306Q	0.18
GBM	chr1	114427278	Missense_Mutation	rs755058963	R440H	0.39
HNSC	chr1	114425682	Missense_Mutation	novel	P488S	0.14
HNSC	chr1	114421542	Missense_Mutation	novel	N652I	0.46
HNSC	chr1	114424695	Missense_Mutation	novel	Q586E	0.25
KIRC	chr1	114424631	Missense_Mutation	novel	G607V	0.34
KIRC	chr1	114405644	Frame_Shift_Ins	novel	*M845Nfs3**	0.32
KIRP	chr1	114463412	Missense_Mutation	novel	E264K	0.38
KIRP	chr1	114463414	Nonsense_Mutation	novel	S263*	0.37
KIRP	chr1	114421636	Missense_Mutation	novel	H621N	0.41
KIRP	chr1	114405573	Missense_Mutation	NA	H869Y	0.27
KIRP	chr1	114399562	Silent	rs376287925	T1005T	0.28
LGG	chr1	114421436	Missense_Mutation	novel	Q687H	0.51
LUAD	chr1	114397581	3'UTR	novel		0.71
LUAD	chr1	114397705	Silent	novel	F1109F	0.09
LUAD	chr1	114433685	Missense_Mutation	novel	E324D	0.17
LUAD	chr1	114427210	Missense_Mutation	NA	P463S	0.23
LUAD	chr1	114405644	Missense_Mutation	novel	M845T	0.05
LUAD	chr1	114427253	Silent	rs766573219	D448D	0.05
LUAD	chr1	114427871	Missense_Mutation	novel	M393I	0.28
LUAD	chr1	114410184	Missense_Mutation	novel	G732C	0.16
LUAD	chr1	114410185	Splice_Region	novel	S731S	0.16
LUAD	chr1	114405473	Missense_Mutation	novel	C902S	0.09
LUAD	chr1	114397759	Missense_Mutation	novel	E1091D	0.1
LUSC	chr1	114405549	Missense_Mutation	novel	D877N	0.16
LUSC	chr1	114405450	Missense_Mutation	novel	H910Y	0.45
LUSC	chr1	114425554	Frame_Shift_Ins	novel	*Q530Hfs34**	0.04
LUSC	chr1	114427233	Missense_Mutation	NA	G455A	0.11
LUSC	chr1	114427823	Silent	NA	V409V	0.45
LUSC	chr1	114407048	Missense_Mutation	novel	D771Y	0.27
LUSC	chr1	114406947	Silent	NA	A804A	0.2
LUSC	chr1	114407011	Missense_Mutation	novel	D783G	0.53
LUSC	chr1	114427832	Silent	NA	S406S	0.28
LUSC	chr1	114406941	Missense_Mutation	novel	M806I	0.2
LUSC	chr1	114421523	Silent	novel	T658T	0.17
OV	chr1	114397988	Nonsense_Mutation	novel	*M1041Ifs9**	0.08
OV	chr1	114405714	Missense_Mutation	rs763011367	L822V	0.36
OV	chr1	114464363	Silent	novel	C184C	0.06
PAAD	chr1	114425598	Missense_Mutation	novel	L516I	0.1
PAAD	chr1	114405566	Missense_Mutation	rs752539788	S871L	0.22
PAAD	chr1	114425605	Silent	novel	Q513Q	0.18
PRAD	chr1	114463489	Missense_Mutation	novel	C238Y	0.28
PRAD	chr1	114463166	Silent	NA	F287F	0.06
PRAD	chr1	114399492	Missense_Mutation	NA	R1029C	0.16
PRAD	chr1	114425449	Splice_Region	novel	Q565Q	0.33
PRAD	chr1	114405506	Missense_Mutation	novel	A891V	0.46
PRAD	chr1	114425488	Silent	novel	Q552Q	0.12
READ	chr1	114401456	Missense_Mutation	NA	E967G	0.27
READ	chr1	114397795	Missense_Mutation	novel	E1079D	0.4
READ	chr1	114425592	Missense_Mutation	novel	H518N	0.41
READ	chr1	114433698	Missense_Mutation	novel	K320R	0.04
SARC	chr1	114396162	3'UTR	novel		0.86
SKCM	chr1	114430839	Nonsense_Mutation	NA	E372*	0.35
SKCM	chr1	114463434	Silent	NA	I256I	0.34
SKCM	chr1	114399493	Silent	NA	V1028V	0.94
SKCM	chr1	114421534	Missense_Mutation	NA	R655G	0.18
SKCM	chr1	114397767	Silent	NA	L1089L	0.11
SKCM	chr1	114402815	Missense_Mutation	novel	L946S	0.41
SKCM	chr1	114410248	Silent	rs752816848	P710P	0.44
SKCM	chr1	114421565	Silent	NA	S644S	0.26
STAD	chr1	114397608	3'UTR	novel		0.46
STAD	chr1	114399562	Silent	rs376287925	T1005T	0.21
STAD	chr1	114397608	3'UTR	novel		0.44
STAD	chr1	114410238	Missense_Mutation	novel	T714A	0.24
STAD	chr1	114464376	Missense_Mutation	NA	R180Q	0.32
STAD	chr1	114421566	Missense_Mutation	NA	S644N	0.36
STAD	chr1	114433652	Missense_Mutation	NA	N335K	0.4
STAD	chr1	114464361	Missense_Mutation	rs200001914	R185H	0.57
STAD	chr1	114425493	In_Frame_Ins	rs781563891	T550dup	0.44
STAD	chr1	114427225	Missense_Mutation	rs767928950	R458C	0.4
STAD	chr1	114421534	Nonsense_Mutation	novel	R655*	0.05
STAD	chr1	114397774	Silent	rs188462748	F1086F	0.06
STAD	chr1	114425678	Missense_Mutation	NA	N489I	0.44
STAD	chr1	114397800	Missense_Mutation	NA	T1078A	0.23
STAD	chr1	114410246	Frame_Shift_Del	NA	*P711Hfs7**	0.26
THCA	chr1	114410290	Missense_Mutation	novel	L696F	0.26
UCEC	chr1	114399478	Missense_Mutation	NA	K1033N	0.32
UCEC	chr1	114405468	Missense_Mutation	NA	K904Q	0.32
UCEC	chr1	114433673	Silent	NA	A328A	0.28
UCEC	chr1	114393161	3'UTR	novel		0.34
UCEC	chr1	114394536	3'UTR	novel		0.31
UCEC	chr1	114397777	Silent	novel	T1085T	0.29
UCEC	chr1	114425488	Missense_Mutation	novel	Q552H	0.38
UCEC	chr1	114421627	Missense_Mutation	NA	P624S	0.38
UCEC	chr1	114401390	Missense_Mutation	NA	S989L	0.16
UCEC	chr1	114433721	Frame_Shift_Ins	novel	*L312Ffs13**	0.1
UCEC	chr1	114393061	3'UTR	novel		0.41
UCEC	chr1	114394167	3'UTR	novel		0.4
UCEC	chr1	114421595	Silent	novel	S634S	0.38
UCEC	chr1	114464280	Missense_Mutation	rs757363388	K212T	0.39
UCEC	chr1	114396580	3'UTR	novel		0.54
UCEC	chr1	114397710	Missense_Mutation	NA	D1108Y	0.44
UCEC	chr1	114393045	3'UTR	rs749302002		0.4
UCEC	chr1	114463212	Missense_Mutation	NA	R272H	0.35
UCEC	chr1	114397372	3'UTR	novel		0.38
UCEC	chr1	114430855	Missense_Mutation	novel	I366M	0.37
UCEC	chr1	114410302	Silent	novel	G692G	0.36
UCEC	chr1	114393045	3'UTR	rs749302002		0.38
UCEC	chr1	114405493	Silent	rs561012524	N895N	0.41
UCEC	chr1	114405629	Missense_Mutation	novel	K850T	0.41
UCEC	chr1	114424748	Missense_Mutation	novel	R568Q	0.52
UCEC	chr1	114393728	3'UTR	novel		0.22
UCEC	chr1	114394524	3'UTR	novel		0.31
UCEC	chr1	114405584	Missense_Mutation	rs369776856	R865Q	0.05
UCEC	chr1	114430900	Silent	NA	V351V	0.17
UCEC	chr1	114427279	Missense_Mutation	NA	R440C	0.12
UCEC	chr1	114397751	Missense_Mutation	NA	Q1094R	0.33
UCEC	chr1	114410231	Missense_Mutation	novel	T716N	0.2
UCEC	chr1	114463412	Nonsense_Mutation	novel	E264*	0.19
UCEC	chr1	114405493	Silent	rs561012524	N895N	0.27
UCEC	chr1	114421460	Silent	rs764358109	S679S	0.46
UCEC	chr1	114430893	Missense_Mutation	novel	T354A	0.05
UCEC	chr1	114399561	Missense_Mutation	rs763612749	V1006M	0.15
UCEC	chr1	114393728	3'UTR	novel		0.54
UCEC	chr1	114394178	3'UTR	novel		0.31
UCEC	chr1	114394401	3'UTR	novel		0.38
UCEC	chr1	114420451	Intron	novel		0.4
UCEC	chr1	114427188	Missense_Mutation	novel	V470A	0.07
UCEC	chr1	114396177	3'UTR	novel		0.42
UCEC	chr1	114396556	3'UTR	novel		0.22
UCEC	chr1	114394106	3'UTR	novel		0.4
UCEC	chr1	114421555	Missense_Mutation	novel	A648S	0.31
UCEC	chr1	114397468	3'UTR	novel		0.29
UCEC	chr1	114393553	3'UTR	novel		0.63
UCEC	chr1	114430883	Missense_Mutation	novel	R357Q	0.11
UCEC	chr1	114433666	Missense_Mutation	novel	L331I	0.25
UCEC	chr1	114393685	3'UTR	novel		0.38
UCEC	chr1	114406960	Missense_Mutation	NA	G800D	0.05
UCEC	chr1	114393055	3'UTR	novel		0.44
UCEC	chr1	114393163	3'UTR	novel		0.58
UCEC	chr1	114425707	Missense_Mutation	novel	E479D	0.25
UCEC	chr1	114464356	Nonsense_Mutation	novel	E187*	0.47
UCEC	chr1	114405260	Intron	novel		0.17
UCEC	chr1	114394062	3'UTR	novel		0.56
UCEC	chr1	114405471	Missense_Mutation	rs748568840	E903K	0.14
UCEC	chr1	114430834	Missense_Mutation	novel	I373M	0.25
UCEC	chr1	114402860	Frame_Shift_Ins	novel	*C931Lfs2**	0.35
UCEC	chr1	114425697	Missense_Mutation	novel	A483T	0.25
UCEC	chr1	114427231	Missense_Mutation	novel	A456T	0.31
UCEC	chr1	114464362	Missense_Mutation	rs527615130	R185C	0.44
UCEC	chr1	114396616	3'UTR	novel		0.33
UCEC	chr1	114393540	3'UTR	novel		0.4
UCEC	chr1	114394113	3'UTR	novel		0.42
UCEC	chr1	114396504	3'UTR	novel		0.43
UCEC	chr1	114394007	3'UTR	novel		0.42
UCEC	chr1	114393648	3'UTR	novel		0.37
UCEC	chr1	114393931	3'UTR	novel		0.36
UCEC	chr1	114420446	Intron	novel		0.24
UCEC	chr1	114393152	3'UTR	novel		0.36
UCEC	chr1	114420445	Intron	rs750203924		0.32
UCEC	chr1	114393741	3'UTR	novel		0.24
UCEC	chr1	114393202	3'UTR	novel		0.33
UCEC	chr1	114399519	Missense_Mutation	novel	I1020L	0.52
UCEC	chr1	114463120	Nonsense_Mutation	novel	E303*	0.34
UCEC	chr1	114397685	Missense_Mutation	novel	R1116H	0.42
UCEC	chr1	114427878	Missense_Mutation	NA	R391I	0.24
UCEC	chr1	114396316	3'UTR	novel		0.17
UCEC	chr1	114396711	3'UTR	novel		0.33
UCEC	chr1	114425600	Missense_Mutation	NA	R515Q	0.13
UCEC	chr1	114393113	3'UTR	novel		0.31
UCEC	chr1	114396456	3'UTR	novel		0.3
UCEC	chr1	114397970	Silent	novel	V1047V	0.17
UCEC	chr1	114402787	Silent	rs776166965	A955A	0.29
UCEC	chr1	114397472	3'UTR	novel		0.32
UCEC	chr1	114397773	Missense_Mutation	NA	A1087T	0.07
UCEC	chr1	114393231	3'UTR	novel		0.58
UCEC	chr1	114396666	3'UTR	novel		0.33
UCEC	chr1	114393945	3'UTR	novel		0.32
UCEC	chr1	114402834	Nonsense_Mutation	NA	E940*	0.31
UCEC	chr1	114405585	Nonsense_Mutation	NA	R865*	0.38
UCEC	chr1	114393201	3'UTR	novel		0.41
UCEC	chr1	114405325	Intron	novel		0.48
UCEC	chr1	114463111	Nonsense_Mutation	novel	E306*	0.28
UCEC	chr1	114397718	Missense_Mutation	rs12062220	S1105F	0.24
UCEC	chr1	114399576	Missense_Mutation	novel	M1001V	0.22
UCEC	chr1	114424609	Silent	NA	Q614Q	0.28
UCEC	chr1	114425493	Nonsense_Mutation	novel	Q551*	0.28
UCEC	chr1	114393728	3'UTR	novel		0.38
UCEC	chr1	114393782	3'UTR	novel		0.35
UCEC	chr1	114402836	Missense_Mutation	NA	V939D	0.31
UCEC	chr1	114397799	Missense_Mutation	NA	T1078I	0.31
UCEC	chr1	114405675	Missense_Mutation	novel	E835K	0.33
UCEC	chr1	114407050	Missense_Mutation	novel	S770Y	0.09
UCEC	chr1	114463207	Missense_Mutation	NA	V274I	0.37
UCEC	chr1	114405573	Missense_Mutation	NA	H869Y	0.4
UCEC	chr1	114393971	3'UTR	novel		0.35
UCEC	chr1	114396455	3'UTR	rs115227797		0.35
UCEC	chr1	114401462	Missense_Mutation	novel	K965T	0.5
UCEC	chr1	114394418	3'UTR	novel		0.3
UCEC	chr1	114421507	Missense_Mutation	novel	A664S	0.15
UCEC	chr1	114424633	Silent	rs533295381	S606S	0.32
UCS	chr1	114464295	Missense_Mutation	novel	S207T	0.31
UCS	chr1	114421460	Silent	rs764358109	S679S	0.23

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
BRCA	DEL	0.2157	5.7821e-10
CESC	DEL	0.0949	0.01281
COAD	DEL	0.2262	0.00038973
DLBC	DEL	0.1042	0.0017831
ESCA	DEL	0.2663	8.8025e-06
HNSC	DEL	0.2146	7.836e-19
LUAD	DEL	0.2287	2.5961e-13
LUSC	DEL	0.3772	1.8628e-17
READ	DEL	0.2727	0.013822
SKCM	DEL	0.1662	9.7877e-07
STAD	DEL	0.1701	0.0040659
TGCT	AMP	0.2067	0.088103

Survival Analysis

Cancer	P-value	Q-value
KIRC	0.0015	Kaplan-Meier Survival Analysis
SARC	0.0043	Kaplan-Meier Survival Analysis
HNSC	0.012	Kaplan-Meier Survival Analysis
SKCM	0.015	Kaplan-Meier Survival Analysis
COAD	0.0076	Kaplan-Meier Survival Analysis
READ	0.0044	Kaplan-Meier Survival Analysis
LAML	0.035	Kaplan-Meier Survival Analysis
KICH	0.019	Kaplan-Meier Survival Analysis
UCEC	0.016	Kaplan-Meier Survival Analysis
LIHC	0.011	Kaplan-Meier Survival Analysis
LGG	0.014	Kaplan-Meier Survival Analysis

Drugs

Cell lines and drugs in GSE70138 or GSE92742

Description

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Gene Ontology

Description

Ensembl ID: ENSG00000197323 (Gene tree)
Gene ID: 51592
Gene Symbol: TRIM33
Alias: TIF1GAMMA|FLJ11429|KIAA1113|TIFGAMMA|RFG7|TF1G|TIF1G|PTC7
Full Name: tripartite motif containing 33
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 118,384 bases
Position: chr1:114,392,777-114,511,160
Accession: 16290
RBP type: non-canonical RBP
Summary: The protein encoded by this gene is thought to be a transcriptional corepressor. However, molecules that interact with this protein have not yet been identified. The protein is a member of the tripartite motif family. This motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. Three alternatively spliced transcript variants for this gene have been described, however, the full-length nature of one variant has not been determined. [provided by RefSeq, Jul 2008]

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
31331374	Interplay between FACT subunit SPT16 and TRIM33 can remodel chromatin at macrophage distal regulatory elements.	Epigenetics Chromatin	2019 Jul 22	Ferri F	doi: 10.1186/s13072-019-0288-3.

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000476908	TRIM33-204	1461	-	-	- (aa)	-	-
ENST00000369543	TRIM33-202	3457	XM_005270937	ENSP00000358556	1110 (aa)	XP_005270994	Q9UPN9
ENST00000448034	TRIM33-203	2706	XM_024447584	ENSP00000402333	888 (aa)	XP_024303352	H0Y612
ENST00000478032	TRIM33-205	536	-	-	- (aa)	-	-
ENST00000492227	TRIM33-206	355	-	-	- (aa)	-	-
ENST00000358465	TRIM33-201	8339	XM_005270936	ENSP00000351250	1127 (aa)	XP_005270993	Q9UPN9

Gene Model

Click here to download ENSG00000197323's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000197323	Breast Neoplasms	1.16140945064047E-12	17903305
ENSG00000197323	Breast Neoplasms	4.9751524459192E-13	17903305
ENSG00000197323	Heart Failure	1.2789318E-005	-
ENSG00000197323	Heart Failure	1.2789318E-005	-
ENSG00000197323	Autistic Disorder	2E-7	24189344
ENSG00000197323	Autistic Disorder	4E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	4E-8	24189344
ENSG00000197323	Autistic Disorder	2E-7	24189344
ENSG00000197323	Autistic Disorder	3E-8	24189344
ENSG00000197323	Autistic Disorder	2E-7	24189344
ENSG00000197323	Autistic Disorder	4E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	4E-8	24189344
ENSG00000197323	Autistic Disorder	2E-7	24189344
ENSG00000197323	Autistic Disorder	4E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	4E-8	24189344
ENSG00000197323	Autistic Disorder	2E-7	24189344
ENSG00000197323	Autistic Disorder	4E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	6E-8	24189344
ENSG00000197323	Autistic Disorder	4E-8	24189344
ENSG00000197323	Autistic Disorder	2E-7	24189344

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000197323	rs6537825	1	114405659	A	Autism	24189344	[NR]	1.4	EFO_0003758
ENSG00000197323	rs11585926	1	114431068	?	Red cell distribution width	30595370			EFO_0005192
ENSG00000197323	rs11102800	1	114498310	?	Waist-hip ratio	30595370			EFO_0004343
ENSG00000197323	rs12083692	1	114489767	?	Lung function (FEV1/FVC)	30595370			EFO_0004713
ENSG00000197323	rs2143583	1	114446589	?	Mean corpuscular hemoglobin	30595370			EFO_0004527

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000197323's network

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	TAS	Process
GO:0003677	DNA binding	-	IEA	Function
GO:0004842	ubiquitin-protein transferase activity	-	TAS	Function
GO:0005515	protein binding	19135894.20603019.21597466.	IPI	Function
GO:0005634	nucleus	19135894.	IDA	Component
GO:0005654	nucleoplasm	-	TAS	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0016567	protein ubiquitination	19135894.	IDA	Process
GO:0016567	protein ubiquitination	-	IEA	Process
GO:0017015	regulation of transforming growth factor beta receptor signaling pathway	19135894.	IDA	Process
GO:0030514	negative regulation of BMP signaling pathway	19135894.	IDA	Process
GO:0045892	negative regulation of transcription, DNA-templated	10022127.	NAS	Process
GO:0070410	co-SMAD binding	19135894.	IPI	Function
GO:0070412	R-SMAD binding	19135894.	IPI	Function

EuRBPDB

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Description

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Gene Ontology

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