EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
18381799BAT1 promoter polymorphism is associated with rheumatoid arthritis susceptibility.J Rheumatol2008 MayQuiones-Lombraa A-
30176153DDX39B promotes translation through regulation of pre-ribosomal RNA levels.RNA Biol2018Awasthi Sdoi: 10.1080/15476286.2018.1517011

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr631531163Nonsense_MutationNAR338*0.18
BLCAchr631532882SilentNAT255T0.27
BLCAchr631535409Missense_MutationNAL231F0.19
BLCAchr631536431Intronnovel0.18
BLCAchr631532838Missense_MutationnovelK270T0.3
BLCAchr631540451Missense_MutationNAE28K0.13
BLCAchr631541202Intronnovel0.18
BLCAchr631530869Missense_MutationNAE394K0.18
BLCAchr631532922Intronnovel0.12
BLCAchr631541217Intronnovel0.15
BLCAchr631539040Intronnovel0.11
BRCAchr631531101SilentNAI358I0.34
BRCAchr6315424195'UTRnovel0.2
BRCAchr631535154Intronnovel0.65
BRCAchr631532822Missense_MutationnovelN275K0.05
BRCAchr631540920Intronnovel0.39
CESCchr631541030Intronnovel0.44
CESCchr631530923Missense_MutationnovelA376S0.37
CESCchr631531486Intronnovel0.15
CHOLchr631534266Intronnovel0.47
COADchr631535186Intronnovel0.47
COADchr631541264Intronnovel0.17
COADchr631541264Intronnovel0.22
COADchr631536669Frame_Shift_DelNAF149Lfs*130.44
COADchr631541264Intronnovel0.41
COADchr631541264Intronnovel0.77
COADchr631536669Frame_Shift_DelNAF149Lfs*130.24
COADchr631534515IntronNA0.43
COADchr631534531Intronnovel0.26
COADchr631541264Intronnovel0.43
COADchr631534624Intronnovel0.78
COADchr631534531Intronnovel0.23
COADchr631541264Intronnovel0.41
COADchr631534530Intronnovel0.17
COADchr631536669Frame_Shift_DelNAF149Lfs*130.3
COADchr631540964Intronnovel0.3
COADchr631531162Missense_MutationNAR338Q0.26
COADchr631541264Intronnovel0.27
COADchr631531502Intronnovel0.6
COADchr631534531Intronnovel0.45
COADchr631534480Intronnovel0.27
COADchr631536669Frame_Shift_DelNAF149Lfs*130.22
COADchr631531160Nonsense_MutationNAR339*0.26
COADchr6315302623'UTRrs32191890.44
COADchr631530804SilentNAP415P0.21
ESCAchr631535327Intronrs1451918730.18
GBMchr631540377SilentNAL52L0.22
GBMchr631532898Missense_MutationnovelF250C0.19
HNSCchr631536393Intronnovel0.11
KIRCchr631539247Missense_MutationNAI80T0.27ResIII
KIRCchr631536585Frame_Shift_InsnovelA178*0.23
KIRCchr631541892Intronnovel0.38
KIRPchr631539265Missense_MutationNAE74G0.44ResIII
KIRPchr631541485Intronnovel0.45
LAMLchr6315405535'UTRnovel0.04
LAMLchr631541205Intronnovel0.12
LGGchr631538841SilentNAV118V0.11
LGGchr631540489Missense_MutationNAD15G0.13
LIHCchr631541723Intronnovel0.36
LIHCchr631539230Missense_MutationnovelL86V0.51ResIII
LIHCchr631532784Missense_Mutationrs745700709N288S0.44
LUADchr631532803SilentnovelL282L0.39
LUADchr631530827Missense_MutationnovelE408Q0.1
LUADchr631535339Intronnovel0.08
LUADchr631540358Missense_MutationnovelA59S0.23
LUADchr631531150Missense_MutationnovelV342A0.61
LUADchr631531298Missense_MutationnovelE325D0.3
LUADchr631530783SilentnovelS422S0.4
LUADchr631531054Missense_MutationnovelR374Q0.07
LUADchr631532882SilentNAT255T0.17
LUADchr631536393Intronnovel0.41
LUADchr631539272Nonsense_MutationnovelQ72*0.19ResIII
LUADchr631540519Missense_MutationNAD5A0.21
LUSCchr631536579SilentnovelL179L0.25
LUSCchr631530882SilentNAT389T0.38
LUSCchr631539275Splice_SitenovelX71_splice0.05
LUSCchr631530852Missense_MutationnovelI399M0.13
LUSCchr6315405835'UTRnovel0.35
LUSCchr631532813SilentnovelL278L0.25
LUSCchr631532920Intronnovel0.28
OVchr631541263Intronnovel0.25
OVchr631530803Missense_MutationNAD416H0.29
OVchr631541097Intronnovel0.07
PAADchr631530873Silentrs747572088S392S0.18
PAADchr631531332Missense_MutationnovelA314V0.04
PRADchr631541264Intronnovel0.3
PRADchr631531386Missense_MutationnovelS296C0.18
PRADchr631540447Missense_MutationnovelA29G0.29
READchr631541264Intronnovel0.43
READchr631541325Intronnovel0.26
READchr631535254Intronnovel0.36
READchr631536517Missense_MutationnovelK200T0.41
READchr631540524SilentnovelE3E0.39
SARCchr6315420655'UTRnovel0.06
SKCMchr631531463Intronnovel0.44
SKCMchr631531321Missense_MutationNAH318Y0.17
SKCMchr631531424Intronnovel0.35
SKCMchr631535314Intronnovel0.29
SKCMchr631541215Intronnovel0.63
SKCMchr631531300Missense_MutationNAE325K0.57
SKCMchr631540451Missense_MutationNAE28K0.43
SKCMchr631532822Missense_MutationNAN275K0.64
SKCMchr631535314Intronnovel0.22
SKCMchr631535330Intronrs2010975510.2
SKCMchr631532927Intronnovel0.5
SKCMchr631535358Intronnovel0.4
SKCMchr631532806Missense_MutationnovelL281F0.27
SKCMchr631532807SilentnovelD280D0.29
SKCMchr631530933Splice_Regionrs7653342160.28
SKCMchr631536391Intronnovel0.15
SKCMchr631536598Missense_MutationNAP173L0.29
SKCMchr631540357Missense_MutationnovelA59V0.25
SKCMchr631540382SilentNAL51L0.68
SKCMchr631530933Splice_Regionrs7653342160.33
SKCMchr6315304233'UTRrs7665481400.13
SKCMchr6315405575'UTRnovel0.19
STADchr631541271Intronnovel0.22
STADchr631532897Silentrs774073722F250F0.37
STADchr631536669Frame_Shift_DelNAF149Lfs*130.28
STADchr631536669Frame_Shift_DelNAF149Lfs*130.18
STADchr631536669Frame_Shift_DelNAF149Lfs*130.27
STADchr631536669Frame_Shift_DelNAF149Lfs*130.18
STADchr631541264Intronnovel0.29
STADchr631536669Frame_Shift_DelNAF149Lfs*130.19
STADchr631541264Intronnovel0.32
STADchr631536669Frame_Shift_DelNAF149Lfs*130.25
STADchr631540368Missense_MutationnovelE55D0.15
STADchr631536669Frame_Shift_DelNAF149Lfs*130.41
STADchr631541175Intronrs3739282180.15
STADchr631541264Intronnovel0.26
STADchr631536405Intronnovel0.38
STADchr631541264Intronnovel0.21
STADchr631539147Splice_RegionnovelQ113Q0.06
STADchr631541264Intronnovel0.17
STADchr631536669Frame_Shift_DelNAF149Lfs*130.24
STADchr631541177Intronnovel0.24
STADchr631536669Frame_Shift_DelNAF149Lfs*130.42
STADchr631538947Intronrs7520363480.12
THYMchr631541870Intronnovel0.1
THYMchr631541145Intronnovel0.3
UCECchr631539162SilentnovelE108E0.49
UCECchr631540506Missense_MutationnovelE9D0.18
UCECchr631531154Missense_MutationNAL341I0.21
UCECchr631540456Missense_MutationnovelG26E0.46
UCECchr631535187Intronnovel0.56
UCECchr631530443SilentnovelQ426Q0.45
UCECchr631541593Intronnovel0.09
UCECchr6315422235'UTRnovel0.05
UCECchr631541845Intronnovel0.33
UCECchr631535309Intronnovel0.31
UCECchr631541264Intronnovel0.5
UCECchr631535306IntronNA0.85
UCECchr631540486Missense_MutationnovelD16A0.25
UCECchr6315423105'UTRnovel0.11
UCECchr631540485SilentnovelD16D0.47
UCECchr631541264Intronnovel0.55
UCECchr631536669Frame_Shift_DelNAF149Lfs*130.36
UCECchr631541264Intronnovel0.42
UCECchr631534515IntronNA0.3
UCECchr631540957Intronnovel0.38
UCECchr631536603Silentrs190488922G171G0.49
UCECchr631541827Intronnovel0.57
UCECchr631530855Missense_MutationnovelK398N0.6
UCECchr6315422255'UTRnovel0.41
UCECchr631532991Intronnovel0.71
UCECchr631538998Intronrs1396481270.21
UCECchr631531154Missense_MutationNAL341I0.46
UCECchr631532897Silentrs774073722F250F0.47
UCECchr631535456Missense_Mutationrs267600954R216C0.25
UCECchr6315422255'UTRnovel0.42
UCECchr631535330Intronrs2010975510.38
UCECchr631536669Frame_Shift_DelNAF149Lfs*130.27
UCECchr631535127Intronrs5667424750.25
UCECchr631535268Intronnovel0.61
UCECchr631538840Missense_MutationnovelM119L0.37
UCECchr631536669Frame_Shift_DelNAF149Lfs*130.28
UCECchr6315303783'UTRnovel0.33
UCECchr631531130Nonsense_MutationNAR349*0.11
UCECchr6315304243'UTRnovel0.24
UCECchr631530910Missense_MutationnovelR380Q0.16
UCECchr631540965Intronnovel0.36
UCECchr631532873Silentrs539629605T258T0.33
UCECchr631535444Frame_Shift_DelNAH220Tfs*60.3
UCECchr631540465Missense_MutationNAG23E0.23
UCECchr631534624Intronnovel0.42
UCECchr631530878Missense_MutationnovelV391L0.5
UCECchr631535262Intronrs7459062880.3

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
DLBCDEL0.10420.011841

Survival Analysis
CancerP-value Q-value
KIRC0.00011

Kaplan-Meier Survival Analysis

SARC0.022

Kaplan-Meier Survival Analysis

ACC0.033

Kaplan-Meier Survival Analysis

HNSC0.018

Kaplan-Meier Survival Analysis

PRAD0.019

Kaplan-Meier Survival Analysis

COAD0.0042

Kaplan-Meier Survival Analysis

PCPG0.0057

Kaplan-Meier Survival Analysis

BLCA0.0001

Kaplan-Meier Survival Analysis

CESC0.023

Kaplan-Meier Survival Analysis

READ0.028

Kaplan-Meier Survival Analysis

UCEC0.006

Kaplan-Meier Survival Analysis

GBM0.016

Kaplan-Meier Survival Analysis

LIHC0.038

Kaplan-Meier Survival Analysis

THCA0.017

Kaplan-Meier Survival Analysis

LUAD0.029

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000198563 (Gene tree)
Gene ID
7919
Gene Symbol
DDX39B
Alias
D6S81E|UAP56|BAT1
Full Name
DExD-box helicase 39B
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
12,257 bases
Position
chr6:31,530,219-31,542,475
Accession
13917
RBP type
canonical RBP
Summary
This gene encodes a member of the DEAD box family of RNA-dependent ATPases that mediate ATP hydrolysis during pre-mRNA splicing. The encoded protein is an essential splicing factor required for association of U2 small nuclear ribonucleoprotein with pre-mRNA, and it also plays an important role in mRNA export from the nucleus to the cytoplasm. This gene belongs to a cluster of genes localized in the vicinity of the genes encoding tumor necrosis factor alpha and tumor necrosis factor beta. These genes are all within the human major histocompatibility complex class III region. Mutations in this gene may be associated with rheumatoid arthritis. Alternative splicing results in multiple transcript variants. Related pseudogenes have been identified on both chromosomes 6 and 11. Read-through transcription also occurs between this gene and the upstream ATP6V1G2 (ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2) gene. [provided by RefSeq, Feb 2011]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000410313ResIIIPF04851.151.4e-0711
ENSP00000392672ResIIIPF04851.151.5e-0711
ENSP00000399371ResIIIPF04851.152.2e-0711
ENSP00000416350ResIIIPF04851.152.9e-0711
ENSP00000379475ResIIIPF04851.154.8e-0711
ENSP00000416269ResIIIPF04851.154.8e-0711
ENSP00000365347ResIIIPF04851.155e-0711
ENSP00000392672DEADPF00270.297.6e-3911
ENSP00000399371DEADPF00270.291.3e-3811
ENSP00000410313DEADPF00270.291.3e-3811
ENSP00000379475DEADPF00270.292.5e-3811
ENSP00000416269DEADPF00270.292.5e-3811
ENSP00000365347DEADPF00270.292.8e-3811
ENSP00000416350DEADPF00270.299.8e-3811
ENSP00000408000DEADPF00270.296.9e-1911
ENSP00000409426DEADPF00270.295.1e-1611
ENSP00000405707DEADPF00270.292e-1511
ENSP00000393984DEADPF00270.293.2e-0911
ENSP00000399841DEADPF00270.291.6e-0711
ENSP00000405245DEADPF00270.292.9e-0711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
16500893RNA-binding of the human cytomegalovirus transactivator protein UL69, mediated by arginine-rich motifs, is not required for nuclear export of unspliced RNA.Nucleic Acids Res2006 Feb 25Toth Z-
18722339Isolation and characterization of Plasmodium falciparum UAP56 homolog: evidence for the coupling of RNA binding and splicing activity by site-directed mutations.Arch Biochem Biophys2008 Oct 15Shankar Jdoi: 10.1016/j.abb.2008.07.027
29070793Cellular splicing factor UAP56 stimulates trimeric NP formation for assembly of functional influenza viral ribonucleoprotein complexes.Sci Rep2017 Oct 25Hu Ydoi: 10.1038/s41598-017-13784-4.
30258431The Cellular DExD/H-Box RNA Helicase UAP56 Co-localizes With the Influenza A Virus NS1 Protein.Front Microbiol2018 Sep 12Chiba Sdoi: 10.3389/fmicb.2018.02192
10343160Characterisation of the human central MHC gene, BAT1: genomic structure and expression.Exp Clin Immunogenet1999Allcock RJ-
17984224ATP-dependent recruitment of export factor Aly/REF onto intronless mRNAs by RNA helicase UAP56.Mol Cell Biol2008 JanTaniguchi I-
17251556Multimerization of human cytomegalovirus regulatory protein UL69 via a domain that is conserved within its herpesvirus homologues.J Gen Virol2007 FebLischka P-
26178996pUL69 of Human Cytomegalovirus Recruits the Cellular Protein Arginine Methyltransferase 6 via a Domain That Is Crucial for mRNA Export and Efficient Viral Replication.J Virol2015 SepThomas Mdoi: 10.1128/JVI.01399-15
11156602Identification and characterization of yUAP/Sub2p, a yeast homolog of the essential human pre-mRNA splicing factor hUAP56.Genes Dev2001 Jan 1Zhang M-
18411249Binding of ATP to UAP56 is necessary for mRNA export.J Cell Sci2008 May 1Kota KPdoi: 10.1242/jcs.021055
30700540The UAP56-Interacting Export Factors UIEF1 and UIEF2 Function in mRNA Export.Plant Physiol2019 AprEhrnsberger HFdoi: 10.1104/pp.18.01476
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000462256DDX39B-2154027--- (aa)--
ENST00000481456DDX39B-2195158--- (aa)--
ENST00000376177DDX39B-2011529-ENSP00000365347425 (aa)-Q5STU3
ENST00000474961DDX39B-217974--- (aa)--
ENST00000484566DDX39B-221857-ENSP00000436220141 (aa)-H0YCC6
ENST00000456976DDX39B-213720-ENSP00000393984125 (aa)-F6U6E2
ENST00000458640DDX39B-2142003-ENSP00000416269428 (aa)-Q13838
ENST00000456662DDX39B-212932-ENSP00000416350231 (aa)-F6S4E6
ENST00000419338DDX39B-206928-ENSP00000410313235 (aa)-A0A0A0MT12
ENST00000428450DDX39B-209633-ENSP00000405707197 (aa)-F6R6M7
ENST00000417023DDX39B-203561-ENSP00000406422187 (aa)-H0Y400
ENST00000449757DDX39B-211591-ENSP00000409426187 (aa)-F6QYI9
ENST00000428098DDX39B-208817-ENSP00000392672238 (aa)-F6TRA5
ENST00000478365DDX39B-218439--- (aa)--
ENST00000431908DDX39B-210914-ENSP00000408000245 (aa)-F6UJC5
ENST00000482195DDX39B-2201232--- (aa)--
ENST00000419020DDX39B-205583-ENSP00000405245132 (aa)-F6S2B7
ENST00000462421DDX39B-216618--- (aa)--
ENST00000396172DDX39B-2022133-ENSP00000379475428 (aa)-Q13838
ENST00000418897DDX39B-204583-ENSP00000399841136 (aa)-F6SXL5
ENST00000427214DDX39B-2071005-ENSP00000399371289 (aa)-F6WLT2
Gene Model
Click here to download ENSG00000198563's gene model file
Pathways
Pathway IDPathway NameSource
hsa03013RNA transportKEGG
hsa03015mRNA surveillance pathwayKEGG
hsa03040SpliceosomeKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000198563Breast Neoplasms2.459E-1317660530
ENSG00000198563Diabetes Mellitus, Type 15.29E-6819430480
ENSG00000198563Behcet Syndrome4.55942540272892E-0520622878
ENSG00000198563Behcet Syndrome5.97381407474203E-0620622878
ENSG00000198563Behcet Syndrome8.82169288626833E-0720622878
ENSG00000198563Behcet Syndrome8.71917049005456E-0720622878
ENSG00000198563Behcet Syndrome1.03078253218308E-0620622878
ENSG00000198563Behcet Syndrome8.82169288626833E-0720622878
ENSG00000198563Behcet Syndrome1.0729589781576E-0620622878
ENSG00000198563Behcet Syndrome6.22624609680527E-0720622878
ENSG00000198563Platelet Function Tests8.1800000E-006-
ENSG00000198563Stevens-Johnson Syndrome2E-821912425
ENSG00000198563Dermatitis, Atopic2E-622197932
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000198563rs2269476631540161AMean platelet volume27863252[0.039-0.057] unit increase0.04806173EFO_0004584
ENSG00000198563rs114050967631537703GMyositis26291516[NR]2.32EFO_0000783
ENSG00000198563rs9267485631538013GMosquito bite size28199695[0.041-0.065] unit decrease0.0531442EFO_0008378
ENSG00000198563rs34788230631540676GMonocyte percentage of white cells27863252[0.02-0.034] unit decrease0.02679379EFO_0007989
ENSG00000198563rs2734583631537703?Stevens-Johnson syndrome and toxic epidermal necrolysis (SJS-TEN)21912425[19.8-225.0]66.8EFO_0004276|EFO_0004775
ENSG00000198563rs3853601631531826GAtopic dermatitis22197932[1.08-1.19]1.13EFO_0000274
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000198563's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000198563DDX39B7830.256ENSG00000111364DDX558531.902
ENSG00000198563DDX39B10089.953ENSG00000123136DDX39A10089.953
ENSG00000198563DDX39B9132.832ENSG00000157349DDX19B9833.243
ENSG00000198563DDX39B8038.095ENSG00000124228DDX278831.837
ENSG00000198563DDX39B8632.367ENSG00000198231DDX425130.685
ENSG00000198563DDX39B8132.821ENSG00000136271DDX568835.976
ENSG00000198563DDX39B9638.547ENSG00000110367DDX67935.659
ENSG00000198563DDX39B8331.120ENSG00000123064DDX549132.812
ENSG00000198563DDX39B9531.351ENSG00000109832DDX259440.625
ENSG00000198563DDX39B8432.922ENSG00000213782DDX477535.159
ENSG00000198563DDX39B9136.257ENSG00000156976EIF4A27950.000
ENSG00000198563DDX39B9136.842ENSG00000141543EIF4A38838.356
ENSG00000198563DDX39B9330.387ENSG00000118197DDX597930.387
ENSG00000198563DDX39B8030.612ENSG00000278053DDX525041.379
ENSG00000198563DDX39B9237.687ENSG00000161960EIF4A19541.406
ENSG00000198563DDX39B8736.053ENSG00000064703DDX205139.437
ENSG00000198563DDX39B9132.581ENSG00000168872DDX19A9533.246
ENSG00000198563DDX39B8731.759ENSG00000105671DDX497139.241
ENSG00000198563DDX39B7730.029ENSG00000108654DDX57030.081
ENSG00000198563DDX39B9930.116ENSG00000215301DDX3X7930.052
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000198563DDX39B10099.766ENSAMEG00000009508DDX39B9999.766Ailuropoda_melanoleuca
ENSG00000198563DDX39B9993.677ENSACIG00000004534ddx39b9893.677Amphilophus_citrinellus
ENSG00000198563DDX39B10092.824ENSATEG00000012366ddx39b10092.824Anabas_testudineus
ENSG00000198563DDX39B10097.203ENSACAG00000012240DDX39B10097.203Anolis_carolinensis
ENSG00000198563DDX39B100100.000ENSANAG00000030372DDX39B100100.000Aotus_nancymaae
ENSG00000198563DDX39B9595.506ENSACLG00000018759ddx39b9990.783Astatotilapia_calliptera
ENSG00000198563DDX39B10092.431ENSAMXG00000017837ddx39b10092.431Astyanax_mexicanus
ENSG00000198563DDX39B100100.000ENSBTAG00000014490DDX39B10099.766Bos_taurus
ENSG00000198563DDX39B100100.000ENSCJAG00000003152DDX39B100100.000Callithrix_jacchus
ENSG00000198563DDX39B10099.533ENSCAFG00000000509DDX39B100100.000Canis_familiaris
ENSG00000198563DDX39B10099.533ENSCAFG00020020530DDX39B10099.533Canis_lupus_dingo
ENSG00000198563DDX39B100100.000ENSCHIG00000004579DDX39B10099.766Capra_hircus
ENSG00000198563DDX39B10088.936ENSTSYG00000029741-9188.095Carlito_syrichta
ENSG00000198563DDX39B100100.000ENSTSYG00000010226-100100.000Carlito_syrichta
ENSG00000198563DDX39B100100.000ENSCAPG00000010066DDX39B10099.766Cavia_aperea
ENSG00000198563DDX39B100100.000ENSCPOG00000002335DDX39B10099.766Cavia_porcellus
ENSG00000198563DDX39B100100.000ENSCCAG00000027897DDX39B100100.000Cebus_capucinus
ENSG00000198563DDX39B10096.800ENSCATG00000043709DDX39B10093.176Cercocebus_atys
ENSG00000198563DDX39B100100.000ENSCLAG00000014555DDX39B10099.766Chinchilla_lanigera
ENSG00000198563DDX39B100100.000ENSCSAG00000008517DDX39B10099.765Chlorocebus_sabaeus
ENSG00000198563DDX39B95100.000ENSCPBG00000014671-100100.000Chrysemys_picta_bellii
ENSG00000198563DDX39B100100.000ENSCANG00000041217DDX39B100100.000Colobus_angolensis_palliatus
ENSG00000198563DDX39B9591.525ENSCGRG00001021916-8984.358Cricetulus_griseus_chok1gshd
ENSG00000198563DDX39B10099.160ENSCGRG00001017315-9599.029Cricetulus_griseus_chok1gshd
ENSG00000198563DDX39B10099.160ENSCGRG00000012479-7699.184Cricetulus_griseus_crigri
ENSG00000198563DDX39B10097.600ENSCGRG00000000078-9098.537Cricetulus_griseus_crigri
ENSG00000198563DDX39B10092.184ENSDARG00000036069ddx39b10092.414Danio_rerio
ENSG00000198563DDX39B100100.000ENSDNOG00000010215DDX39B100100.000Dasypus_novemcinctus
ENSG00000198563DDX39B10099.654ENSDORG00000004985Ddx39b10099.733Dipodomys_ordii
ENSG00000198563DDX39B10098.701ENSETEG00000009649DDX39B8786.898Echinops_telfairi
ENSG00000198563DDX39B100100.000ENSEASG00005017156DDX39B100100.000Equus_asinus_asinus
ENSG00000198563DDX39B100100.000ENSECAG00000007750DDX39B100100.000Equus_caballus
ENSG00000198563DDX39B9597.753ENSELUG00000017904ddx39b10092.343Esox_lucius
ENSG00000198563DDX39B10099.766ENSFCAG00000004497DDX39B10099.766Felis_catus
ENSG00000198563DDX39B100100.000ENSFDAG00000011074DDX39B10099.766Fukomys_damarensis
ENSG00000198563DDX39B95100.000ENSGAGG00000001300-8099.684Gopherus_agassizii
ENSG00000198563DDX39B100100.000ENSGGOG00000005989DDX39B100100.000Gorilla_gorilla
ENSG00000198563DDX39B10086.822ENSHBUG00000022054-7788.038Haplochromis_burtoni
ENSG00000198563DDX39B10099.299ENSHGLG00000019248DDX39B10099.299Heterocephalus_glaber_female
ENSG00000198563DDX39B10099.299ENSHGLG00100011850DDX39B10099.299Heterocephalus_glaber_male
ENSG00000198563DDX39B9596.629ENSIPUG00000015733DDX39B9491.743Ictalurus_punctatus
ENSG00000198563DDX39B100100.000ENSSTOG00000012838DDX39B10099.533Ictidomys_tridecemlineatus
ENSG00000198563DDX39B10099.299ENSJJAG00000005660-10099.299Jaculus_jaculus
ENSG00000198563DDX39B10076.050ENSLBEG00000017177-8575.102Labrus_bergylta
ENSG00000198563DDX39B9683.799ENSLBEG00000012254ddx39b9978.220Labrus_bergylta
ENSG00000198563DDX39B95100.000ENSLACG00000002110DDX39B10089.862Latimeria_chalumnae
ENSG00000198563DDX39B100100.000ENSLAFG00000014202DDX39B10099.766Loxodonta_africana
ENSG00000198563DDX39B100100.000ENSMFAG00000034233DDX39B100100.000Macaca_fascicularis
ENSG00000198563DDX39B100100.000ENSMMUG00000008839DDX39B100100.000Macaca_mulatta
ENSG00000198563DDX39B100100.000ENSMNEG00000041059DDX39B100100.000Macaca_nemestrina
ENSG00000198563DDX39B100100.000ENSMLEG00000043791DDX39B100100.000Mandrillus_leucophaeus
ENSG00000198563DDX39B9595.506ENSMZEG00005017654ddx39b9990.783Maylandia_zebra
ENSG00000198563DDX39B10099.308ENSMAUG00000008059Ddx39b10099.299Mesocricetus_auratus
ENSG00000198563DDX39B100100.000ENSMICG00000017349DDX39B100100.000Microcebus_murinus
ENSG00000198563DDX39B10099.533ENSMOCG00000011169Ddx39b10099.533Microtus_ochrogaster
ENSG00000198563DDX39B100100.000ENSMODG00000015791DDX39B10095.294Monodelphis_domestica
ENSG00000198563DDX39B10098.400MGP_CAROLIEiJ_G0021519-9797.765Mus_caroli
ENSG00000198563DDX39B10099.533ENSMUSG00000019432Ddx39b100100.000Mus_musculus
ENSG00000198563DDX39B10099.533MGP_PahariEiJ_G0020513Ddx39b100100.000Mus_pahari
ENSG00000198563DDX39B10099.533MGP_SPRETEiJ_G0022424Ddx39b10099.533Mus_spretus
ENSG00000198563DDX39B10099.766ENSMPUG00000011407DDX39B10099.766Mustela_putorius_furo
ENSG00000198563DDX39B95100.000ENSMLUG00000001681DDX39B100100.000Myotis_lucifugus
ENSG00000198563DDX39B100100.000ENSNGAG00000022948Ddx39b100100.000Nannospalax_galili
ENSG00000198563DDX39B95100.000ENSNLEG00000006094DDX39B10075.467Nomascus_leucogenys
ENSG00000198563DDX39B10098.400ENSMEUG00000008264DDX39B86100.000Notamacropus_eugenii
ENSG00000198563DDX39B10099.766ENSOPRG00000011923DDX39B10099.766Ochotona_princeps
ENSG00000198563DDX39B10099.567ENSODEG00000018083DDX39B10099.533Octodon_degus
ENSG00000198563DDX39B10091.898ENSONIG00000004740ddx39b10091.898Oreochromis_niloticus
ENSG00000198563DDX39B100100.000ENSOANG00000008361DDX39B9599.156Ornithorhynchus_anatinus
ENSG00000198563DDX39B10096.163ENSOCUG00000024126DDX39B10096.163Oryctolagus_cuniculus
ENSG00000198563DDX39B95100.000ENSOGAG00000009067-10098.457Otolemur_garnettii
ENSG00000198563DDX39B10098.621ENSOGAG00000028850-10098.601Otolemur_garnettii
ENSG00000198563DDX39B100100.000ENSOARG00000008787DDX39B9899.766Ovis_aries
ENSG00000198563DDX39B100100.000ENSPPAG00000043072DDX39B100100.000Pan_paniscus
ENSG00000198563DDX39B10099.766ENSPPRG00000001913DDX39B10099.766Panthera_pardus
ENSG00000198563DDX39B10098.832ENSPTIG00000017669DDX39B10098.832Panthera_tigris_altaica
ENSG00000198563DDX39B100100.000ENSPTRG00000032509DDX39B100100.000Pan_troglodytes
ENSG00000198563DDX39B100100.000ENSPANG00000018609DDX39B100100.000Papio_anubis
ENSG00000198563DDX39B9596.629ENSPKIG00000011324ddx39b10091.304Paramormyrops_kingsleyae
ENSG00000198563DDX39B10099.299ENSPEMG00000016905Ddx39b10099.299Peromyscus_maniculatus_bairdii
ENSG00000198563DDX39B100100.000ENSPCIG00000017572DDX39B100100.000Phascolarctos_cinereus
ENSG00000198563DDX39B100100.000ENSPPYG00000016433DDX39B100100.000Pongo_abelii
ENSG00000198563DDX39B9599.438ENSPCAG00000003484DDX39B10099.648Procavia_capensis
ENSG00000198563DDX39B100100.000ENSPCOG00000018656DDX39B100100.000Propithecus_coquereli
ENSG00000198563DDX39B10099.533ENSPVAG00000004653DDX39B10099.533Pteropus_vampyrus
ENSG00000198563DDX39B9495.429ENSPNYG00000010382ddx39b9882.904Pundamilia_nyererei
ENSG00000198563DDX39B10092.202ENSPNAG00000026926ddx39b10092.202Pygocentrus_nattereri
ENSG00000198563DDX39B10099.533ENSRNOG00000000841Ddx39b10099.533Rattus_norvegicus
ENSG00000198563DDX39B100100.000ENSRBIG00000031309DDX39B10089.720Rhinopithecus_bieti
ENSG00000198563DDX39B100100.000ENSRROG00000039517DDX39B100100.000Rhinopithecus_roxellana
ENSG00000198563DDX39B100100.000ENSSBOG00000035513-10089.720Saimiri_boliviensis_boliviensis
ENSG00000198563DDX39B10098.400ENSSBOG00000030486-9797.945Saimiri_boliviensis_boliviensis
ENSG00000198563DDX39B100100.000ENSSHAG00000003209DDX39B100100.000Sarcophilus_harrisii
ENSG00000198563DDX39B9596.629ENSSFOG00015016107ddx39b10091.762Scleropages_formosus
ENSG00000198563DDX39B10093.287ENSSDUG00000011557ddx39b10093.519Seriola_dumerili
ENSG00000198563DDX39B10093.056ENSSLDG00000015763ddx39b10093.287Seriola_lalandi_dorsalis
ENSG00000198563DDX39B10099.160ENSSARG00000005245DDX39B10087.701Sorex_araneus
ENSG00000198563DDX39B10097.897ENSSPUG00000012805DDX39B10097.897Sphenodon_punctatus
ENSG00000198563DDX39B100100.000ENSSSCG00000001400DDX39B100100.000Sus_scrofa
ENSG00000198563DDX39B90100.000ENSTBEG00000003721DDX39B10076.869Tupaia_belangeri
ENSG00000198563DDX39B100100.000ENSTTRG00000014074DDX39B10091.455Tursiops_truncatus
ENSG00000198563DDX39B10099.200ENSUAMG00000027335DDX39B10086.977Ursus_americanus
ENSG00000198563DDX39B10090.888ENSUMAG00000015124DDX39B10090.888Ursus_maritimus
ENSG00000198563DDX39B90100.000ENSVPAG00000009167-74100.000Vicugna_pacos
ENSG00000198563DDX39B10099.533ENSVVUG00000019518DDX39B9999.533Vulpes_vulpes
ENSG00000198563DDX39B9597.753ENSXETG00000002498ddx39b9983.953Xenopus_tropicalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000245spliceosomal complex assembly18593880.IDAProcess
GO:0000346transcription export complex15833825.15998806.IDAComponent
GO:0000398mRNA splicing, via spliceosome15047853.IGIProcess
GO:0001889liver development-IEAProcess
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0004004ATP-dependent RNA helicase activity17562711.18593880.IDAFunction
GO:0005515protein binding11979277.14667819.15047853.15870275.19836239.21859714.23299939.30021884.IPIFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus21859714.IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005681spliceosomal complex18593880.IDAComponent
GO:0005687U4 snRNP18593880.IDAComponent
GO:0005688U6 snRNP18593880.IDAComponent
GO:0005737cytoplasm21859714.IDAComponent
GO:0006405RNA export from nucleus-TASProcess
GO:0006406mRNA export from nucleus17190602.IDAProcess
GO:0006406mRNA export from nucleus15047853.IGIProcess
GO:0008186RNA-dependent ATPase activity17562711.IDAFunction
GO:0008380RNA splicing18593880.IDAProcess
GO:0010501RNA secondary structure unwinding18593880.IDAProcess
GO:0016363nuclear matrix-IEAComponent
GO:0016607nuclear speck-IDAComponent
GO:0016887ATPase activity20844015.EXPFunction
GO:0017070U6 snRNA binding18593880.IDAFunction
GO:0030621U4 snRNA binding18593880.IDAFunction
GO:0031124mRNA 3'-end processing-TASProcess
GO:0032786positive regulation of DNA-templated transcription, elongation22144908.IMPProcess
GO:0042802identical protein binding14667819.IPIFunction
GO:0043008ATP-dependent protein binding18593880.IDAFunction
GO:0044877protein-containing complex binding-IEAFunction
GO:0045727positive regulation of translation-IEAProcess
GO:0046784viral mRNA export from host cell nucleus18974867.IDAProcess
GO:0061051positive regulation of cell growth involved in cardiac muscle cell development-IEAProcess
GO:1904707positive regulation of vascular smooth muscle cell proliferation-IEAProcess
GO:2000002negative regulation of DNA damage checkpoint22144908.IMPProcess
GO:2000573positive regulation of DNA biosynthetic process-IEAProcess
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