EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
23079975Association of MHC class-III gene polymorphisms with ER-positive breast cancer in Chinese Han population.Genet Mol Res2012 Dec 17Pan Qdoi: 10.4238/2012.September.17.1.

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr631901176Frame_Shift_DelnovelK43Ffs*210.31
BLCAchr631899963Missense_MutationNAE448V0.39
BLCAchr631900077Missense_MutationnovelS410L0.43
BLCAchr631901282SilentnovelL8L0.61
BLCAchr631900275Missense_MutationnovelG344D0.09
BLCAchr631901021SilentnovelF95F0.15
BLCAchr631900903Missense_MutationNAE135Q0.32
BRCAchr631900218Missense_Mutationrs762290440R363H0.04zf-C2H2
BRCAchr631901005Missense_MutationNAV101F0.25
BRCAchr631900059Missense_Mutationrs749307616R416H0.21
CESCchr631900973SilentNAQ111Q0.16
CESCchr631900170Missense_MutationnovelN379S0.32zf-C2H2
CESCchr631901101Missense_MutationnovelE69K0.07
CESCchr631900947Missense_Mutationrs756745454R120Q0.4
COADchr631900249Missense_MutationnovelR353W0.15
COADchr6319013125'UTRnovel0.38
COADchr631900211SilentnovelG365G0.31
COADchr631899977SilentnovelA443A0.54
COADchr631900707Missense_MutationnovelD200G0.45
COADchr6318999163'UTRnovel0.44
COADchr631900804Missense_MutationNAP168S0.52
COADchr631901131Missense_MutationNAR59W0.07
COADchr631901189SilentNAA39A0.23
COADchr631900547Frame_Shift_DelNAS254Afs*30.35
ESCAchr631900387Frame_Shift_DelnovelA307Rfs*240.3
ESCAchr631900579Frame_Shift_InsnovelL243Tfs*150.44
GBMchr631900180Missense_MutationnovelR376C0.28zf-C2H2
GBMchr631900241Missense_MutationnovelQ355H0.4
GBMchr631900097SilentnovelH403H0.41
HNSCchr631900546Frame_Shift_InsnovelS254Qfs*150.19
HNSCchr631900219Missense_Mutationrs796344107R363C0.25zf-C2H2
HNSCchr631900307Missense_MutationnovelI333M0.25
KIRCchr631900949SilentNAC119C0.17
KIRCchr631900112Missense_MutationNAQ398H0.53
KIRPchr631900972Missense_MutationnovelM112L0.58
LAMLchr631900911Missense_MutationnovelG132D0.36
LIHCchr631900694In_Frame_Insrs764477797E203_D204dup0.33
LIHCchr631900364SilentnovelG314G0.23
LIHCchr631900958SilentnovelV116V0.18
LUADchr631900903Missense_MutationNAE135Q0.52
LUADchr631901228SilentNAL26L0.09
LUADchr631901159SilentnovelV49V0.15
LUADchr631900947Missense_MutationnovelR120L0.28
LUSCchr631901121Missense_MutationNAF62S0.15
LUSCchr631900744Missense_MutationNAE188K0.24
LUSCchr631901221Missense_MutationNAE29K0.23
LUSCchr631899970Missense_MutationnovelV446M0.42
LUSCchr631900787SilentnovelP173P0.45
LUSCchr6318998823'UTRrs7519474270.25
LUSCchr631900924Nonsense_MutationnovelE128*0.31
OVchr631901009Missense_MutationNAD99E0.14
PRADchr631900011Missense_MutationNAR432Q0.36
READchr6318999213'UTRrs5406512430.52
SARCchr631900544Missense_Mutationrs753644043S254R0.41
SKCMchr631900273Missense_MutationNAV345M0.26
SKCMchr631900592SilentNAS238S0.28
SKCMchr631900593Missense_MutationnovelS238F0.28
SKCMchr631900482Missense_MutationNAG275E0.16
SKCMchr631900592SilentNAS238S0.4
SKCMchr631900657SilentnovelL217L0.26
SKCMchr631900667SilentNAV213V0.43
STADchr6318998383'UTRnovel0.29
STADchr631901139Missense_MutationNAP56H0.22
STADchr631900668Missense_MutationNAV213A0.38
STADchr631901070Missense_MutationNAR79H0.27
STADchr631900661Silentrs370274844S215S0.4
STADchr631900611Frame_Shift_DelnovelG232Vfs*250.24
STADchr631900213Missense_MutationnovelG365C0.2zf-C2H2
STADchr631900949SilentNAC119C0.13
THCAchr631900360Frame_Shift_DelnovelS316Afs*150.09
UCECchr631900245Missense_MutationNAA354V0.33
UCECchr631900042Missense_MutationnovelV422M0.12
UCECchr631900660Missense_MutationnovelA216T0.3
UCECchr631900046SilentnovelC420C0.42
UCECchr631899981Missense_MutationnovelT442M0.38
UCECchr631901102SilentnovelS68S0.38
UCECchr631901201SilentNAV35V0.25
UCECchr631899931Missense_MutationnovelR459C0.28
UCECchr631900556SilentnovelS250S0.2
UCECchr631900964Silentrs749911963H114H0.33
UCECchr631901219Missense_MutationnovelE29D0.14
UCECchr631900046SilentnovelC420C0.63
UCECchr6318998383'UTRnovel0.36
UCECchr631900284Missense_Mutationrs369788796V341A0.36
UCECchr631900169SilentNAN379N0.36
UCECchr631900274SilentNAG344G0.22
UCECchr631899970Missense_MutationnovelV446M0.38
UCECchr631900483Missense_MutationnovelG275W0.38
UCECchr6318999243'UTRnovel0.45
UCECchr631900653Missense_MutationnovelE218A0.37
UCECchr631900863Missense_MutationnovelS148I0.28
UCECchr631900862Silentrs768825206S148S0.23

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
DLBCDEL0.10420.011841

Survival Analysis
CancerP-value Q-value
KIRC0.00027

Kaplan-Meier Survival Analysis

SARC0.0017

Kaplan-Meier Survival Analysis

ACC0.011

Kaplan-Meier Survival Analysis

SKCM0.014

Kaplan-Meier Survival Analysis

COAD0.041

Kaplan-Meier Survival Analysis

BLCA0.0086

Kaplan-Meier Survival Analysis

READ0.0015

Kaplan-Meier Survival Analysis

LAML0.00011

Kaplan-Meier Survival Analysis

LIHC0.0034

Kaplan-Meier Survival Analysis

LGG0.0039

Kaplan-Meier Survival Analysis

CHOL0.02

Kaplan-Meier Survival Analysis

UVM0.00031

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000204366 (Gene tree)
Gene ID
221527
Gene Symbol
ZBTB12
Alias
G10|NG35|D6S59E|C6orf46
Full Name
zinc finger and BTB domain containing 12
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
3,164 bases
Position
chr6:31,899,204-31,902,367
Accession
19066
RBP type
canonical RBP
Summary
ZBTB12 (Zinc Finger And BTB Domain Containing 12) is a Protein Coding gene. An important paralog of this gene is ZBTB26.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000364677zf-C2H2PF00096.263.2e-1312
ENSP00000364677zf-C2H2PF00096.263.2e-1322
ENSP00000364677zf-metPF12874.70.0001911
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000375527ZBTB12-2011875XM_011514383ENSP00000364677459 (aa)XP_011512685Q9Y330
Gene Model
Click here to download ENSG00000204366's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000204366Lupus Erythematosus, Systemic2.8947E-1818204098
ENSG00000204366Diabetes Mellitus, Type 11.6E-8619430480
ENSG00000204366Lupus Erythematosus, Systemic4.2E-818204446
ENSG00000204366Lupus Erythematosus, Systemic8E-2124871463
ENSG00000204366Vaccine Potency1E-1721764829
ENSG00000204366Surveys and Questionnaires6E-622566634
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000204366rs114508013631900988GBlood protein levels30072576[NR] unit increase1.5771569EFO_0007937
ENSG00000204366rs114508013631900988GBlood protein levels30072576[NR] unit increase1.1050375EFO_0007937
ENSG00000204366rs114508013631900988GBlood protein levels30072576[NR] unit increase0.89926857EFO_0007937
ENSG00000204366rs114508013631900988GBlood protein levels30072576[NR] unit decrease0.5455914EFO_0007937
ENSG00000204366rs114508013631900988GBlood protein levels30072576[NR] unit decrease0.51218635EFO_0007937
ENSG00000204366rs114508013631900988GBlood protein levels30072576[NR] unit increase0.45406085EFO_0007937
ENSG00000204366rs114508013631900988GBlood protein levels30072576[1.04-1.31] unit increase1.176EFO_0007937
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000204366's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000204366ZBTB1210096.296ENSAMEG00000012921ZBTB1210096.296Ailuropoda_melanoleuca
ENSG00000204366ZBTB1210064.571ENSACAG00000011189ZBTB1210064.397Anolis_carolinensis
ENSG00000204366ZBTB1210099.782ENSANAG00000019564ZBTB1210099.782Aotus_nancymaae
ENSG00000204366ZBTB1210098.911ENSBTAG00000032031ZBTB1210098.911Bos_taurus
ENSG00000204366ZBTB1210099.564ENSCJAG00000044185ZBTB1210099.564Callithrix_jacchus
ENSG00000204366ZBTB1210098.475ENSCAFG00000000674ZBTB1210098.475Canis_familiaris
ENSG00000204366ZBTB1210098.475ENSCAFG00020000911ZBTB1210098.475Canis_lupus_dingo
ENSG00000204366ZBTB1210098.911ENSCHIG00000007636ZBTB1210098.911Capra_hircus
ENSG00000204366ZBTB1210099.346ENSCCAG00000019304ZBTB1210099.346Cebus_capucinus
ENSG00000204366ZBTB1210098.911ENSCLAG00000007108ZBTB1210098.911Chinchilla_lanigera
ENSG00000204366ZBTB129965.605ENSCPBG00000012202ZBTB129967.797Chrysemys_picta_bellii
ENSG00000204366ZBTB1210098.475ENSCANG00000038177ZBTB1210098.475Colobus_angolensis_palliatus
ENSG00000204366ZBTB1210095.474ENSCGRG00001002052Zbtb1210095.474Cricetulus_griseus_chok1gshd
ENSG00000204366ZBTB125367.717ENSDARG00000103949zbtb12.15167.717Danio_rerio
ENSG00000204366ZBTB1210098.475ENSEASG00005015654ZBTB1210098.475Equus_asinus_asinus
ENSG00000204366ZBTB1210098.475ENSECAG00000034980ZBTB1210098.475Equus_caballus
ENSG00000204366ZBTB1210098.693ENSFCAG00000031296ZBTB1210098.693Felis_catus
ENSG00000204366ZBTB127795.122ENSFDAG00000018453ZBTB129996.855Fukomys_damarensis
ENSG00000204366ZBTB129965.678ENSGAGG00000002344ZBTB129967.511Gopherus_agassizii
ENSG00000204366ZBTB1210099.346ENSGGOG00000015638ZBTB1210099.346Gorilla_gorilla
ENSG00000204366ZBTB1210098.911ENSHGLG00000016731ZBTB1210098.911Heterocephalus_glaber_female
ENSG00000204366ZBTB1210098.911ENSSTOG00000027411ZBTB1210098.911Ictidomys_tridecemlineatus
ENSG00000204366ZBTB129960.752ENSLACG00000006007ZBTB129960.970Latimeria_chalumnae
ENSG00000204366ZBTB1210099.782ENSMFAG00000010877ZBTB1210099.782Macaca_fascicularis
ENSG00000204366ZBTB1210099.782ENSMMUG00000011683ZBTB1210099.782Macaca_mulatta
ENSG00000204366ZBTB1210099.782ENSMNEG00000022456ZBTB1210099.782Macaca_nemestrina
ENSG00000204366ZBTB1210096.739ENSMAUG00000008051Zbtb1210096.739Mesocricetus_auratus
ENSG00000204366ZBTB1210099.129ENSMICG00000003600ZBTB1210099.129Microcebus_murinus
ENSG00000204366ZBTB1210097.168ENSMOCG00000002711Zbtb1210097.168Microtus_ochrogaster
ENSG00000204366ZBTB129981.761ENSMODG00000015096-9681.132Monodelphis_domestica
ENSG00000204366ZBTB1210097.386MGP_CAROLIEiJ_G0021482Zbtb1210097.386Mus_caroli
ENSG00000204366ZBTB1210097.386ENSMUSG00000049823Zbtb1210097.386Mus_musculus
ENSG00000204366ZBTB1210097.168MGP_PahariEiJ_G0020477Zbtb1210097.168Mus_pahari
ENSG00000204366ZBTB1210097.386MGP_SPRETEiJ_G0022387Zbtb1210097.386Mus_spretus
ENSG00000204366ZBTB1210098.911ENSMPUG00000018357ZBTB1210098.911Mustela_putorius_furo
ENSG00000204366ZBTB1210096.514ENSNGAG00000011842Zbtb1210096.514Nannospalax_galili
ENSG00000204366ZBTB1210099.782ENSNLEG00000034429ZBTB1210099.782Nomascus_leucogenys
ENSG00000204366ZBTB1210097.821ENSODEG00000017709ZBTB1210097.821Octodon_degus
ENSG00000204366ZBTB1210099.346ENSOGAG00000031042ZBTB1210099.346Otolemur_garnettii
ENSG00000204366ZBTB1210094.553ENSPPAG00000033581ZBTB1210095.207Pan_paniscus
ENSG00000204366ZBTB1210098.693ENSPPRG00000000449ZBTB1210098.693Panthera_pardus
ENSG00000204366ZBTB1210099.564ENSPTRG00000017993ZBTB1210099.564Pan_troglodytes
ENSG00000204366ZBTB1210099.564ENSPANG00000003484ZBTB1210099.564Papio_anubis
ENSG00000204366ZBTB126499.658ENSPPYG00000016468-10099.658Pongo_abelii
ENSG00000204366ZBTB1210099.346ENSPCOG00000013160ZBTB1210099.346Propithecus_coquereli
ENSG00000204366ZBTB1210098.475ENSPVAG00000005130ZBTB1210098.475Pteropus_vampyrus
ENSG00000204366ZBTB1210097.821ENSRNOG00000000418Zbtb1210097.821Rattus_norvegicus
ENSG00000204366ZBTB129974.890ENSSHAG00000008383ZBTB129772.907Sarcophilus_harrisii
ENSG00000204366ZBTB129475.221ENSSPUG00000013016ZBTB128275.325Sphenodon_punctatus
ENSG00000204366ZBTB1210099.129ENSSSCG00000001421ZBTB1210099.129Sus_scrofa
ENSG00000204366ZBTB1210097.216ENSUAMG00000024479ZBTB1210097.216Ursus_americanus
ENSG00000204366ZBTB1210098.475ENSVVUG00000022537ZBTB1210098.475Vulpes_vulpes
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific-ISAFunction
GO:0003677DNA binding-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0006357regulation of transcription by RNA polymerase II-IEAProcess
GO:0046872metal ion binding-IEAFunction
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