EuRBPDB

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TCGA tumor abbreviations
  • ACCAdrenocortical carcinoma
  • BLCABladder Urothelial Carcinoma
  • BRCABreast invasive carcinoma
  • CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
  • CHOLCholangio carcinoma
  • COADColon adenocarcinoma
  • DLBCLymphoid Neoplasm Diffuse Large B-cell Lymphoma
  • ESCAEsophageal carcinoma
  • GBMGlioblastoma multiforme
  • HNSCHead and Neck squamous cell carcinoma
  • KICHKidney Chromophobe
  • KIRCKidney renal clear cell carcinoma
  • KIRPKidney renal papillary cell carcinoma
  • LAMLAcute Myeloid Leukemia
  • LGGBrain Lower Grade Glioma
  • LIHCLiver hepatocellular carcinoma
  • LUADLung adenocarcinoma
  • LUSCLung squamous cell carcinoma
  • MESOMesothelioma
  • OVOvarian serous cystadenocarcinoma
  • PAADPancreatic adenocarcinoma
  • PCPGPheochromocytoma and Paraganglioma
  • PRADProstate adenocarcinoma
  • READRectum adenocarcinoma
  • SARCSarcoma
  • SKCMSkin Cutaneous Melanoma
  • STADStomach adenocarcinoma
  • TGCTThyroid carcinoma
  • THCAThyroid carcinoma
  • THYMThymoma
  • UCECUterine Corpus Endometrial Carcinoma
  • UCSUterine Carcinosarcoma
  • UVMUveal Melanoma

Note: Click here to get the extension of tumor abbreviations.


  • Cancer Related Information
  • Basic Information

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr7150720496SilentnovelD164D0.18
BLCAchr7150719090Missense_MutationNAG15S0.44
BLCAchr7150720344Missense_MutationNAA114T0.21
BLCAchr7150720124SilentnovelK40K0.45
BLCAchr7150720061Silentrs144542417N19N0.45
BLCAchr7150720863Missense_MutationNAL287V0.27
BLCAchr7150720417Missense_MutationnovelM138T0.09
BLCAchr7150720207Missense_MutationnovelT68M0.16MMR_HSR1
BLCAchr7150720336Missense_MutationnovelG111E0.23
BRCAchr7150720726Missense_Mutationrs537240577R241Q0.32
BRCAchr7150720236Missense_MutationNAV78M0.16MMR_HSR1
BRCAchr7150720353SilentNAL117L0.23
BRCAchr7150720184SilentnovelT60T0.25
BRCAchr7150720379Silentrs750429019T125T0.11
BRCAchr7150720088SilentnovelR28R0.2
BRCAchr7150720549Missense_MutationNAG182V0.2
CESCchr7150720529SilentNAR175R0.25
CESCchr7150720323Missense_MutationNAL107I0.29
COADchr7150720421Missense_MutationnovelF139L0.28
COADchr7150720902Missense_Mutationrs752300708V300I0.32
COADchr7150720343Silentrs370175882H113H0.49
COADchr7150720454SilentNAV150V0.45
COADchr7150720128Missense_Mutationrs750341190A42T0.2MMR_HSR1
COADchr7150720529SilentNAR175R0.38
COADchr7150720621Missense_Mutationrs780854861G206E0.18
COADchr7150720688SilentNAA228A0.09
COADchr7150720380Missense_Mutationrs374968861A126T0.49
COADchr7150720375Missense_MutationNAF124S0.15
COADchr7150720527Missense_MutationNAR175C0.13
COADchr7150720588Missense_MutationNAR195Q0.33
COADchr7150720318Missense_MutationNAY105C0.2
COADchr7150720900Missense_MutationNAA299V0.32
COADchr7150720587Missense_MutationNAR195W0.15
GBMchr7150720380Missense_Mutationrs374968861A126T0.15
GBMchr7150720156Missense_MutationnovelR51I0.19MMR_HSR1
GBMchr7150720346Silentrs754697498A114A0.38
GBMchr7150720856Silentrs770099581G284G0.3
HNSCchr7150719062Missense_MutationnovelK5N0.32
HNSCchr7150720299Missense_MutationnovelE99K0.31
HNSCchr7150720519Missense_Mutationrs142041443R172Q0.28
HNSCchr7150720451Silentrs150494282I149I0.09
KIRPchr7150720207Missense_MutationnovelT68M0.19MMR_HSR1
LGGchr7150720271SilentnovelS89S0.24
LGGchr7150720422Missense_MutationnovelG140R0.5
LIHCchr7150720886Missense_MutationnovelR294S0.35
LIHCchr7150720817SilentnovelP271P0.12
LIHCchr7150719063Missense_MutationNAM6L0.48
LIHCchr7150720195Missense_Mutationrs142046758R64K0.11MMR_HSR1
LUADchr7150719075Nonsense_MutationnovelE10*0.08
LUADchr7150720328SilentNAS108S0.18
LUADchr7150720355SilentNAL117L0.45
LUADchr7150720086Missense_Mutationrs777141777R28W0.39
LUADchr7150720343Missense_MutationNAH113Q0.24
LUADchr7150720207Missense_MutationnovelT68M0.16MMR_HSR1
LUADchr7150720232Missense_MutationnovelC76W0.35MMR_HSR1
LUADchr7150720204Missense_MutationnovelT67N0.17MMR_HSR1
LUADchr7150720582Missense_MutationNAT193N0.16
LUADchr7150720547Frame_Shift_InsnovelR184Pfs*60.51
LUADchr7150720216Missense_MutationNAR71H0.53MMR_HSR1
LUADchr7150720148Silentrs751279373L48L0.32
LUADchr7150720478SilentNAA158A0.1
LUADchr7150720074Missense_MutationNAQ24K0.28
LUADchr7150720611Nonsense_MutationnovelQ203*0.37
LUADchr7150720555Missense_MutationnovelR184L0.17
LUSCchr71507209633'UTRnovel0.35
LUSCchr7150720355SilentNAL117L0.23
LUSCchr7150720920Missense_MutationnovelD306N0.09
LUSCchr7150720422Missense_MutationnovelG140R0.14
LUSCchr7150720159Missense_MutationnovelR52L0.2MMR_HSR1
LUSCchr7150720690Missense_MutationnovelQ229R0.27
LUSCchr71507209453'UTRnovel0.32
LUSCchr7150720087Missense_MutationNAR28Q0.46
LUSCchr7150720848SilentNAL282L0.13
LUSCchr7150720582Missense_MutationnovelT193S0.23
LUSCchr7150720329Missense_MutationNAA109T0.15
LUSCchr7150719077Missense_MutationnovelE10D0.37
LUSCchr7150720915Missense_MutationNAG304V0.18
LUSCchr7150720135Missense_MutationNAG44A0.21MMR_HSR1
LUSCchr7150720832SilentnovelL276L0.21
LUSCchr7150720833Missense_MutationnovelG277C0.21
MESOchr7150720646SilentnovelE214E0.37
OVchr7150720368Missense_MutationnovelG122C0.41
OVchr7150720069Missense_MutationNAS22Y0.18
OVchr7150720529SilentNAR175R0.44
OVchr7150720346Silentrs754697498A114A0.59
PAADchr7150720509Missense_MutationnovelT169P0.22
PAADchr7150720130SilentnovelA42A0.2
PAADchr7150720608Missense_MutationnovelE202K0.15
PRADchr7150720303Missense_MutationNAE100A0.09
SKCMchr7150720290Missense_MutationNAP96S0.31
SKCMchr7150719055Missense_Mutationrs773050722G3E0.44
SKCMchr7150720323Missense_Mutationrs371565531L107F0.33
SKCMchr7150720422Missense_MutationnovelG140R0.18
SKCMchr7150719058Missense_Mutationrs746747085R4K0.1
SKCMchr7150720118SilentNAA38A0.15
SKCMchr7150720817SilentNAP271P1
SKCMchr71507209283'UTRnovel0.6
SKCMchr7150720105Missense_MutationnovelG34E0.2MMR_HSR1
SKCMchr7150720106SilentnovelG34G0.2
SKCMchr71507209363'UTRnovel0.2
SKCMchr7150719068Silentrs576760161A7A0.3
SKCMchr7150720691SilentNAQ229Q0.29
SKCMchr7150720451Silentrs150494282I149I0.21
SKCMchr7150719052Missense_MutationNAG2E0.24
SKCMchr7150720361SilentNAT119T0.49
SKCMchr7150720421SilentNAF139F0.17
SKCMchr7150720898SilentNAE298E0.24
SKCMchr7150720815Missense_MutationNAP271S0.35
SKCMchr7150720371Missense_Mutationrs781514490R123W0.07
SKCMchr7150720082SilentNAS26S0.08
SKCMchr7150720121SilentNAG39G0.2
SKCMchr7150720621Missense_Mutationrs780854861G206E0.48
SKCMchr7150720852Missense_MutationNAG283E0.27
SKCMchr7150720798Nonsense_MutationNAW265*0.29
SKCMchr7150720900Missense_MutationNAA299V0.45
SKCMchr7150720421SilentNAF139F0.36
SKCMchr7150720671Missense_Mutationrs758913531E223K0.64
SKCMchr7150720898SilentNAE298E0.19
SKCMchr7150720394SilentNAQ130Q0.3
SKCMchr7150720574SilentNAN190N0.14
SKCMchr7150720423Missense_MutationnovelG140E0.08
SKCMchr7150720087Missense_MutationNAR28Q0.07
SKCMchr71507209793'UTRnovel0.57
SKCMchr71507209333'UTRrs7802557050.55
SKCMchr7150720624Missense_MutationnovelM207K0.29
SKCMchr7150720625Missense_MutationnovelM207I0.29
SKCMchr7150720290Missense_MutationNAP96S0.16
SKCMchr7150720655Silentrs777018083G217G0.77
SKCMchr7150720376SilentNAF124F0.41
SKCMchr7150720385SilentnovelQ127Q0.39
SKCMchr7150720514SilentNAE170E0.21
SKCMchr7150719059SilentNAR4R0.23
SKCMchr7150720239Missense_MutationNAE79K0.24MMR_HSR1
SKCMchr7150720134Missense_MutationNAG44W0.25MMR_HSR1
SKCMchr7150720433SilentNAV143V0.21
SKCMchr7150719054Missense_MutationnovelG3R0.09
SKCMchr7150720898SilentNAE298E0.55
SKCMchr7150720451Silentrs150494282I149I0.15
SKCMchr7150720451Silentrs150494282I149I0.44
SKCMchr7150720875SilentNAL291L0.59
SKCMchr7150719050Translation_Start_SitenovelM1?0.67
STADchr7150720528Missense_Mutationrs368249123R175H0.21
STADchr7150720792Missense_MutationNAR263Q0.36
STADchr7150720620Missense_MutationNAG206W0.18
STADchr7150720720Missense_MutationNAR239Q0.19
STADchr71507190465'UTRnovel0.19
STADchr7150720530Missense_MutationNAE176K0.61
STADchr7150719058Missense_MutationNAR4M0.2
STADchr7150720064SilentNAA20A0.24
STADchr71507209293'UTRnovel0.26
STADchr7150720792Missense_MutationNAR263Q0.5
THCAchr7150720379Silentrs750429019T125T0.35
UCECchr7150720159Missense_MutationNAR52Q0.36MMR_HSR1
UCECchr7150720688SilentNAA228A0.38
UCECchr7150720128Missense_Mutationrs750341190A42T0.37MMR_HSR1
UCECchr7150720302Frame_Shift_DelNAR101Vfs*170.17
UCECchr7150720421SilentNAF139F0.16
UCECchr7150720394Missense_MutationnovelQ130H0.08
UCECchr7150720518Missense_MutationnovelR172W0.08
UCECchr7150720289Missense_MutationnovelD95E0.33
UCECchr7150720513Missense_MutationnovelE170G0.26
UCECchr7150720893Missense_MutationnovelS297P0.67
UCECchr7150719078Nonsense_MutationnovelE11*0.34
UCECchr7150719078Nonsense_MutationnovelE11*0.18
UCECchr7150720316Silentrs774082093C104C0.4
UCECchr7150720372Missense_MutationNAR123Q0.1
UCECchr7150720720Missense_MutationNAR239Q0.25
UCECchr7150720527Missense_MutationNAR175C0.38
UCECchr7150719055Missense_MutationnovelG3V0.45
UCECchr7150720659Missense_MutationnovelH219N0.67
UCECchr71507210463'UTRnovel0.44
UCECchr7150720329Missense_MutationnovelA109P0.25
UCECchr7150720810Missense_MutationnovelK269R0.35
UCECchr7150720087Missense_MutationNAR28Q0.31
UCECchr7150720452Missense_MutationNAV150I0.31
UCECchr7150720364SilentnovelQ120Q0.12
UCECchr7150720256Silentrs754787299P84P0.5
UCECchr71507209663'UTRnovel0.25
UCSchr7150720554Missense_MutationnovelR184W0.31

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ACCDEL0.07780.12261
CESCDEL0.17970.0016147
DLBCDEL0.08330.03486
HNSCDEL0.20311.1399e-22
KIRCAMP0.28980.075418
LAMLDEL0.13093.4101e-05
LGGAMP0.31191.5525e-07
LIHCDEL0.07570.24831
OVAMP0.47671.5763e-13
PAADDEL0.06520.049388
TGCTDEL0.07330.11738
THCADEL00.27619
UCECDEL0.09650.0001859
UCSDEL0.33930.10142

Survival Analysis
CancerP-value Q-value
KIRC0.00011

Kaplan-Meier Survival Analysis

SARC0.00012

Kaplan-Meier Survival Analysis

HNSC0.0025

Kaplan-Meier Survival Analysis

SKCM0.0001

Kaplan-Meier Survival Analysis

PAAD0.0073

Kaplan-Meier Survival Analysis

CESC0.0016

Kaplan-Meier Survival Analysis

LAML0.012

Kaplan-Meier Survival Analysis

UCEC0.0028

Kaplan-Meier Survival Analysis

LIHC0.00019

Kaplan-Meier Survival Analysis

DLBC0.021

Kaplan-Meier Survival Analysis

LGG0.0061

Kaplan-Meier Survival Analysis

LUAD0.0008

Kaplan-Meier Survival Analysis

UVM0.00054

Kaplan-Meier Survival Analysis

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000213203 (Gene tree)
Gene ID
170575
Gene Symbol
GIMAP1
Alias
HIMAP1|IMAP38|IMAP1|IAN2
Full Name
GTPase, IMAP family member 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
7,728 bases
Position
chr7:150,716,557-150,724,284
Accession
23237
RBP type
canonical RBP
Summary
This gene encodes a protein belonging to the GTP-binding superfamily and to the immuno-associated nucleotide (IAN) subfamily of nucleotide-binding proteins. In humans, the IAN subfamily genes are located in a cluster at 7q36.1. This gene is thought to be involved in the differentiation of T helper (Th) cells of the Th1 lineage, and the related mouse gene has been shown to be critical for the development of mature B and T lymphocytes. Read-through transcription exists between this gene and the downstream GIMAP5 (GTPase, IMAP family member 5) gene. [provided by RefSeq, Dec 2010]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000302833MMR_HSR1PF01926.236.5e-0511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000464461GIMAP1-202560--- (aa)--
ENST00000307194GIMAP1-2014420-ENSP00000302833306 (aa)-Q8WWP7
Gene Model
Click here to download ENSG00000213203's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000213203Electrocardiography8.81822629021922E-517903306
ENSG00000213203Electrocardiography8.81822629021922E-517903306
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000213203's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000213203GIMAP18383.004ENSANAG00000019932GIMAP110083.004Aotus_nancymaae
ENSG00000213203GIMAP18484.436ENSCJAG00000042381-10082.699Callithrix_jacchus
ENSG00000213203GIMAP110080.719ENSCJAG00000010517-10080.719Callithrix_jacchus
ENSG00000213203GIMAP19456.747ENSCAPG00000011595GIMAP19956.747Cavia_aperea
ENSG00000213203GIMAP19956.536ENSCPOG00000021304GIMAP19956.536Cavia_porcellus
ENSG00000213203GIMAP110084.641ENSCCAG00000028169-10084.641Cebus_capucinus
ENSG00000213203GIMAP19983.775ENSCCAG00000036204-9983.775Cebus_capucinus
ENSG00000213203GIMAP110086.275ENSCSAG00000006869GIMAP110086.275Chlorocebus_sabaeus
ENSG00000213203GIMAP110086.275ENSCANG00000029700GIMAP110086.275Colobus_angolensis_palliatus
ENSG00000213203GIMAP17469.469ENSECAG00000019232-8369.469Equus_caballus
ENSG00000213203GIMAP19668.475ENSHGLG00000012811GIMAP19668.475Heterocephalus_glaber_female
ENSG00000213203GIMAP19667.797ENSHGLG00100003607GIMAP19667.797Heterocephalus_glaber_male
ENSG00000213203GIMAP110086.601ENSMFAG00000035498-10086.601Macaca_fascicularis
ENSG00000213203GIMAP110086.275ENSMNEG00000044901-10086.275Macaca_nemestrina
ENSG00000213203GIMAP19959.406ENSMOCG00000007377Gimap19959.406Microtus_ochrogaster
ENSG00000213203GIMAP19747.368ENSMODG00000003627-7349.823Monodelphis_domestica
ENSG00000213203GIMAP19564.948ENSNGAG00000001314Gimap19665.172Nannospalax_galili
ENSG00000213203GIMAP110092.157ENSNLEG00000029987GIMAP110092.157Nomascus_leucogenys
ENSG00000213203GIMAP17856.250ENSMEUG00000002865-10056.250Notamacropus_eugenii
ENSG00000213203GIMAP110070.033ENSOCUG00000028062-10070.033Oryctolagus_cuniculus
ENSG00000213203GIMAP110078.431ENSPANG00000021224-10078.431Papio_anubis
ENSG00000213203GIMAP16354.872ENSPSIG00000004967-9254.872Pelodiscus_sinensis
ENSG00000213203GIMAP16752.913ENSPSIG00000005330-9452.913Pelodiscus_sinensis
ENSG00000213203GIMAP18250.394ENSPSIG00000012917-9950.394Pelodiscus_sinensis
ENSG00000213203GIMAP110094.118ENSPPYG00000029696GIMAP18894.118Pongo_abelii
ENSG00000213203GIMAP110085.621ENSRBIG00000029909GIMAP110085.621Rhinopithecus_bieti
ENSG00000213203GIMAP110085.294ENSRROG00000030188GIMAP110085.294Rhinopithecus_roxellana
ENSG00000213203GIMAP19982.508ENSSBOG00000025758-9982.508Saimiri_boliviensis_boliviensis
ENSG00000213203GIMAP19979.538ENSSBOG00000030385-9779.538Saimiri_boliviensis_boliviensis
ENSG00000213203GIMAP18156.855ENSSHAG00000010554-8456.855Sarcophilus_harrisii
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000139Golgi membrane-IEAComponent
GO:0005525GTP binding21873635.IBAFunction
GO:0005783endoplasmic reticulum21873635.IBAComponent
GO:0005783endoplasmic reticulum-IDAComponent
GO:0005789endoplasmic reticulum membrane-IEAComponent
GO:0016021integral component of membrane-IEAComponent
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