EuRBPDB

Note: to get the extension of tumor abbreviations.

Cancer Related Information
Basic Information

Differential Expression

Expression in 33 cancers

Mutations

Cancer	Chr	Position	Mutation Type	dbSNP	Allele Freq
BLCA	chr9	112997324	RNA	NA	0.38
BLCA	chr9	112998260	RNA	novel	0.39
BRCA	chr9	112998354	RNA	novel	0.14
BRCA	chr9	112997826	RNA	NA	0.11
BRCA	chr9	112997238	RNA	NA	0.13
BRCA	chr9	112997896	RNA	NA	0.14
BRCA	chr9	112998230	RNA	rs575473956	0.04
CESC	chr9	112997518	RNA	rs756546653	0.26
CESC	chr9	112998062	RNA	NA	0.31
COAD	chr9	112998232	RNA	rs372484597	0.14
COAD	chr9	112997332	RNA	rs201148870	0.44
COAD	chr9	112997810	RNA	rs372343232	0.19
COAD	chr9	112997434	RNA	rs749880472	0.35
COAD	chr9	112997950	RNA	NA	0.15
COAD	chr9	112998078	RNA	rs746480453	0.22
COAD	chr9	112997642	RNA	novel	0.07
ESCA	chr9	112997890	RNA	novel	0.26
ESCA	chr9	112997762	RNA	novel	0.69
GBM	chr9	112997331	RNA	rs748826514	0.33
GBM	chr9	112998104	RNA	novel	0.38
HNSC	chr9	112997953	RNA	novel	0.18
HNSC	chr9	112998195	RNA	novel	0.37
HNSC	chr9	112997752	RNA	rs780069609	0.38
HNSC	chr9	112997300	RNA	novel	0.1
HNSC	chr9	112997728	RNA	NA	0.45
HNSC	chr9	112997858	RNA	novel	0.06
KIRC	chr9	112997404	RNA	NA	0.33
LGG	chr9	112998030	RNA	novel	0.3
LIHC	chr9	112998333	RNA	novel	0.2
LUAD	chr9	112997367	RNA	novel	0.6
LUAD	chr9	112997394	RNA	NA	0.05
LUAD	chr9	112997869	RNA	novel	0.52
LUAD	chr9	112997756	RNA	NA	0.08
LUSC	chr9	112998297	RNA	novel	0.55
LUSC	chr9	112997189	3'Flank	novel	1
LUSC	chr9	112997986	RNA	NA	0.37
LUSC	chr9	112998173	RNA	NA	0.68
LUSC	chr9	112997443	RNA	novel	0.18
LUSC	chr9	112997917	RNA	novel	0.47
LUSC	chr9	112997455	RNA	novel	0.1
LUSC	chr9	112997217	RNA	novel	0.83
LUSC	chr9	112998104	RNA	NA	0.29
PAAD	chr9	112997319	RNA	rs200334238	0.39
PAAD	chr9	112997701	RNA	rs543304301	0.07
PRAD	chr9	112997779	RNA	novel	0.13
PRAD	chr9	112997667	RNA	rs376605473	0.29
PRAD	chr9	112997668	RNA	rs189904941	0.09
PRAD	chr9	112997164	3'Flank	novel	0.45
PRAD	chr9	112997889	RNA	novel	0.42
READ	chr9	112997693	RNA	NA	0.14
READ	chr9	112997332	RNA	rs201148870	0.4
READ	chr9	112997910	RNA	NA	0.4
READ	chr9	112998230	RNA	rs575473956	0.35
READ	chr9	112997574	RNA	NA	0.3
SKCM	chr9	112998052	RNA	NA	0.52
SKCM	chr9	112997391	RNA	NA	0.3
SKCM	chr9	112997910	RNA	rs185997453	0.39
SKCM	chr9	112997461	RNA	NA	0.64
SKCM	chr9	112998276	RNA	novel	0.09
SKCM	chr9	112997300	RNA	NA	0.17
SKCM	chr9	112997720	RNA	NA	0.09
SKCM	chr9	112997800	RNA	NA	0.36
SKCM	chr9	112997905	RNA	NA	0.86
SKCM	chr9	112997821	RNA	novel	0.62
SKCM	chr9	112998242	RNA	novel	0.35
SKCM	chr9	112997728	RNA	NA	0.18
SKCM	chr9	112997910	RNA	rs185997453	0.31
SKCM	chr9	112998256	RNA	NA	0.55
SKCM	chr9	112997928	RNA	NA	0.23
SKCM	chr9	112997554	RNA	NA	0.72
SKCM	chr9	112997548	RNA	NA	0.24
STAD	chr9	112997407	RNA	NA	0.23
STAD	chr9	112997555	RNA	NA	0.08
STAD	chr9	112997548	RNA	NA	0.09
STAD	chr9	112997433	RNA	rs773829180	0.31
STAD	chr9	112998163	RNA	novel	0.12
STAD	chr9	112997443	RNA	novel	0.17
STAD	chr9	112998266	RNA	novel	0.21
STAD	chr9	112997486	RNA	NA	0.06
STAD	chr9	112997555	RNA	NA	0.09
UCEC	chr9	112998105	RNA	rs374489167	0.28
UCEC	chr9	112997371	RNA	NA	0.3
UCEC	chr9	112997810	RNA	rs372343232	0.36
UCEC	chr9	112998142	RNA	novel	0.4
UCEC	chr9	112997879	RNA	NA	0.42
UCEC	chr9	112998078	RNA	rs746480453	0.23
UCEC	chr9	112997932	RNA	NA	0.23
UCEC	chr9	112998242	RNA	NA	0.33
UCEC	chr9	112997575	RNA	novel	0.33
UCEC	chr9	112997922	RNA	novel	0.52
UCEC	chr9	112997469	RNA	novel	0.32
UCEC	chr9	112997934	RNA	novel	0.4
UCEC	chr9	112997463	RNA	novel	0.43
UCEC	chr9	112997490	RNA	NA	0.45
UCEC	chr9	112998148	RNA	novel	0.31
UCEC	chr9	112998122	RNA	novel	0.38
UCEC	chr9	112997910	RNA	NA	0.44
UCEC	chr9	112997774	RNA	NA	0.36
UCEC	chr9	112997331	RNA	rs748826514	0.21
UCEC	chr9	112997139	3'Flank	NA	0.31
UCEC	chr9	112997332	RNA	rs201148870	0.48
UCEC	chr9	112997518	RNA	rs756546653	0.36
UCEC	chr9	112997810	RNA	rs372343232	0.31
UCEC	chr9	112998020	RNA	novel	0.24
UCEC	chr9	112997863	RNA	NA	0.36
UCEC	chr9	112997397	RNA	NA	0.25
UCEC	chr9	112997490	RNA	NA	0.2
UCEC	chr9	112997910	RNA	NA	0.28
UCEC	chr9	112997397	RNA	novel	0.14
UCEC	chr9	112998105	RNA	rs374489167	0.36
UCEC	chr9	112998107	RNA	novel	0.49
UCEC	chr9	112997648	RNA	rs765875560	0.26
UCEC	chr9	112997810	RNA	rs372343232	0.31
UCEC	chr9	112997361	RNA	novel	0.23
UCEC	chr9	112998504	RNA	novel	0.16
UCEC	chr9	112997984	RNA	novel	0.46

Copy Number Variations (CNVs)

Cancer	Type	Freq	Q-value
BLCA	DEL	0.348	0.11788
CHOL	DEL	0.4444	0.067545
LAML	DEL	0.0105	0.24147
LIHC	DEL	0.2649	0.12467
PRAD	AMP	0.0793	0.059049
THCA	DEL	0.0401	0.24038
THYM	DEL	0.0081	0.022012
UCS	DEL	0.6071	0.089783

Survival Analysis

Cancer	P-value	Q-value
STAD	0.00012	Kaplan-Meier Survival Analysis
UCS	0.033	Kaplan-Meier Survival Analysis
LUSC	0.028	Kaplan-Meier Survival Analysis
COAD	0.023	Kaplan-Meier Survival Analysis
READ	0.042	Kaplan-Meier Survival Analysis
LIHC	0.037	Kaplan-Meier Survival Analysis
THCA	0.042	Kaplan-Meier Survival Analysis
UVM	0.0001	Kaplan-Meier Survival Analysis

Description

Expression

Transcripts

Gene Model

GWAS

Description

Ensembl ID: ENSG00000228623 (Gene tree)
Gene ID: 169834
Gene Symbol: ZNF883
Alias: -
Full Name: zinc finger protein 883
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 54,506 bases
Position: chr9:112,957,722-113,012,227
Accession: 27271
RBP type: non-canonical RBP
Summary: ZNF883 (Zinc Finger Protein 883) is a Protein Coding gene.

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000638823	ZNF883-202	1248	-	-	- (aa)	-	-
ENST00000639196	ZNF883-203	1991	-	-	- (aa)	-	-
ENST00000639709	ZNF883-205	1776	-	-	- (aa)	-	-
ENST00000638622	ZNF883-201	2414	-	-	- (aa)	-	-
ENST00000640409	ZNF883-206	1915	-	-	- (aa)	-	-
ENST00000639662	ZNF883-204	1140	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000228623's gene model file

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000228623	rs77506377	9	113010268	?	Response to long-term oxygen therapy in chronic obstructive pulmonary disease	30353303			EFO_0009796\|EFO_0000341

EuRBPDB

Note: Click here to get the extension of tumor abbreviations.

Description

Expression

Transcripts

Gene Model

GWAS

Note: to get the extension of tumor abbreviations.