EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000000434 (Gene tree)
Gene ID: 100559167
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 42176 bases
Position: chrGL343858.1:94903-137078
Accession: 100559167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000000445	ResIII	PF04851.15	1.4e-24	1	2
ENSACAP00000000445	ResIII	PF04851.15	1.4e-24	2	2
ENSACAP00000000445	DEAD	PF00270.29	1.2e-51	1	2
ENSACAP00000000445	DEAD	PF00270.29	1.2e-51	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000000462	SNRNP200-201	5254	XM_003229262	ENSACAP00000000445	1718 (aa)	XP_003229310	H9G3S7

Gene Model

Click here to download ENSACAG00000000434's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000000434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000000434	SNRNP200	83	45.683	ENSACAG00000010080	ASCC3	77	45.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000000434	SNRNP200	100	97.497	ENSG00000144028	SNRNP200	99	97.497	Homo_sapiens
ENSACAG00000000434	SNRNP200	100	89.930	ENSAPOG00000010223	snrnp200	99	89.930	Acanthochromis_polyacanthus
ENSACAG00000000434	SNRNP200	100	97.555	ENSAMEG00000008996	SNRNP200	99	97.555	Ailuropoda_melanoleuca
ENSACAG00000000434	SNRNP200	97	89.442	ENSACIG00000001764	snrnp200	97	89.442	Amphilophus_citrinellus
ENSACAG00000000434	SNRNP200	100	89.814	ENSAOCG00000024593	snrnp200	99	89.814	Amphiprion_ocellaris
ENSACAG00000000434	SNRNP200	97	89.142	ENSAPEG00000012554	snrnp200	99	89.142	Amphiprion_percula
ENSACAG00000000434	SNRNP200	100	90.163	ENSATEG00000022522	snrnp200	99	90.163	Anabas_testudineus
ENSACAG00000000434	SNRNP200	99	97.710	ENSAPLG00000004313	SNRNP200	99	97.710	Anas_platyrhynchos
ENSACAG00000000434	SNRNP200	100	91.889	ENSANAG00000036625	SNRNP200	99	92.410	Aotus_nancymaae
ENSACAG00000000434	SNRNP200	100	89.814	ENSACLG00000011188	snrnp200	99	89.814	Astatotilapia_calliptera
ENSACAG00000000434	SNRNP200	100	89.756	ENSAMXG00000005684	snrnp200	99	89.756	Astyanax_mexicanus
ENSACAG00000000434	SNRNP200	100	97.322	ENSBTAG00000000848	SNRNP200	99	97.322	Bos_taurus
ENSACAG00000000434	SNRNP200	100	97.497	ENSCJAG00000007514	SNRNP200	99	97.497	Callithrix_jacchus
ENSACAG00000000434	SNRNP200	100	96.522	ENSCAFG00020019979	SNRNP200	98	98.176	Canis_lupus_dingo
ENSACAG00000000434	SNRNP200	100	97.555	ENSCHIG00000020611	SNRNP200	99	97.555	Capra_hircus
ENSACAG00000000434	SNRNP200	100	97.555	ENSTSYG00000010467	SNRNP200	99	97.555	Carlito_syrichta
ENSACAG00000000434	SNRNP200	99	96.899	ENSCAPG00000017234	SNRNP200	99	96.899	Cavia_aperea
ENSACAG00000000434	SNRNP200	100	97.264	ENSCPOG00000006776	SNRNP200	99	97.264	Cavia_porcellus
ENSACAG00000000434	SNRNP200	100	97.497	ENSCCAG00000033962	SNRNP200	99	97.497	Cebus_capucinus
ENSACAG00000000434	SNRNP200	100	97.497	ENSCATG00000015790	SNRNP200	99	97.497	Cercocebus_atys
ENSACAG00000000434	SNRNP200	100	97.206	ENSCLAG00000004116	SNRNP200	99	97.206	Chinchilla_lanigera
ENSACAG00000000434	SNRNP200	100	97.497	ENSCSAG00000017369	SNRNP200	99	97.497	Chlorocebus_sabaeus
ENSACAG00000000434	SNRNP200	73	99.213	ENSCHOG00000012981	-	57	99.213	Choloepus_hoffmanni
ENSACAG00000000434	SNRNP200	100	97.676	ENSCPBG00000022571	SNRNP200	99	97.676	Chrysemys_picta_bellii
ENSACAG00000000434	SNRNP200	100	75.696	ENSCING00000005082	-	99	76.058	Ciona_intestinalis
ENSACAG00000000434	SNRNP200	100	90.656	ENSCANG00000033932	SNRNP200	99	97.234	Colobus_angolensis_palliatus
ENSACAG00000000434	SNRNP200	100	97.381	ENSCGRG00001022610	Snrnp200	99	97.381	Cricetulus_griseus_chok1gshd
ENSACAG00000000434	SNRNP200	100	96.973	ENSCGRG00000016472	Snrnp200	99	96.973	Cricetulus_griseus_crigri
ENSACAG00000000434	SNRNP200	100	88.999	ENSCSEG00000016399	snrnp200	99	88.999	Cynoglossus_semilaevis
ENSACAG00000000434	SNRNP200	100	83.702	ENSCVAG00000017631	snrnp200	99	83.702	Cyprinodon_variegatus
ENSACAG00000000434	SNRNP200	100	89.523	ENSDARG00000077536	snrnp200	99	89.523	Danio_rerio
ENSACAG00000000434	SNRNP200	100	95.867	ENSDNOG00000011227	SNRNP200	99	95.867	Dasypus_novemcinctus
ENSACAG00000000434	SNRNP200	100	94.131	ENSDORG00000005861	Snrnp200	99	94.131	Dipodomys_ordii
ENSACAG00000000434	SNRNP200	100	73.043	FBgn0263599	l(3)72Ab	99	72.928	Drosophila_melanogaster
ENSACAG00000000434	SNRNP200	94	98.450	ENSETEG00000000162	SNRNP200	69	98.450	Echinops_telfairi
ENSACAG00000000434	SNRNP200	80	81.166	ENSEBUG00000016524	snrnp200	95	81.166	Eptatretus_burgeri
ENSACAG00000000434	SNRNP200	100	96.120	ENSEASG00005001884	SNRNP200	99	96.120	Equus_asinus_asinus
ENSACAG00000000434	SNRNP200	100	98.825	ENSECAG00000019675	SNRNP200	98	98.825	Equus_caballus
ENSACAG00000000434	SNRNP200	90	100.000	ENSEEUG00000012178	SNRNP200	91	100.000	Erinaceus_europaeus
ENSACAG00000000434	SNRNP200	100	89.581	ENSELUG00000018948	snrnp200	99	89.581	Esox_lucius
ENSACAG00000000434	SNRNP200	100	97.555	ENSFCAG00000010699	SNRNP200	99	97.555	Felis_catus
ENSACAG00000000434	SNRNP200	92	92.857	ENSFALG00000001368	-	94	92.857	Ficedula_albicollis
ENSACAG00000000434	SNRNP200	100	97.322	ENSFDAG00000004683	SNRNP200	99	97.322	Fukomys_damarensis
ENSACAG00000000434	SNRNP200	100	87.020	ENSFHEG00000003786	snrnp200	99	87.020	Fundulus_heteroclitus
ENSACAG00000000434	SNRNP200	100	89.012	ENSGMOG00000004881	snrnp200	99	88.953	Gadus_morhua
ENSACAG00000000434	SNRNP200	100	87.078	ENSGAFG00000010807	snrnp200	99	87.078	Gambusia_affinis
ENSACAG00000000434	SNRNP200	100	89.483	ENSGACG00000011474	snrnp200	99	89.367	Gasterosteus_aculeatus
ENSACAG00000000434	SNRNP200	94	97.577	ENSGAGG00000016069	SNRNP200	98	97.577	Gopherus_agassizii
ENSACAG00000000434	SNRNP200	100	97.497	ENSGGOG00000005174	SNRNP200	99	97.497	Gorilla_gorilla
ENSACAG00000000434	SNRNP200	97	87.477	ENSHBUG00000011322	snrnp200	99	87.477	Haplochromis_burtoni
ENSACAG00000000434	SNRNP200	100	97.322	ENSHGLG00000006654	SNRNP200	99	97.322	Heterocephalus_glaber_female
ENSACAG00000000434	SNRNP200	100	97.322	ENSHGLG00100018594	SNRNP200	99	97.322	Heterocephalus_glaber_male
ENSACAG00000000434	SNRNP200	100	97.497	ENSSTOG00000016351	SNRNP200	99	97.497	Ictidomys_tridecemlineatus
ENSACAG00000000434	SNRNP200	100	97.322	ENSJJAG00000023659	Snrnp200	99	97.322	Jaculus_jaculus
ENSACAG00000000434	SNRNP200	100	86.493	ENSKMAG00000003665	snrnp200	99	86.493	Kryptolebias_marmoratus
ENSACAG00000000434	SNRNP200	100	89.930	ENSLBEG00000021585	snrnp200	99	89.930	Labrus_bergylta
ENSACAG00000000434	SNRNP200	77	93.887	ENSLACG00000000226	SNRNP200	99	93.887	Latimeria_chalumnae
ENSACAG00000000434	SNRNP200	100	91.502	ENSLOCG00000015198	snrnp200	99	91.502	Lepisosteus_oculatus
ENSACAG00000000434	SNRNP200	100	97.148	ENSLAFG00000015626	SNRNP200	99	97.148	Loxodonta_africana
ENSACAG00000000434	SNRNP200	100	97.545	ENSMFAG00000040174	SNRNP200	99	97.545	Macaca_fascicularis
ENSACAG00000000434	SNRNP200	100	97.439	ENSMMUG00000023261	SNRNP200	99	97.439	Macaca_mulatta
ENSACAG00000000434	SNRNP200	100	97.485	ENSMNEG00000032398	SNRNP200	99	97.485	Macaca_nemestrina
ENSACAG00000000434	SNRNP200	100	97.611	ENSMLEG00000019083	SNRNP200	99	97.611	Mandrillus_leucophaeus
ENSACAG00000000434	SNRNP200	100	89.471	ENSMAMG00000007851	snrnp200	99	89.412	Mastacembelus_armatus
ENSACAG00000000434	SNRNP200	97	87.477	ENSMZEG00005010787	snrnp200	99	87.477	Maylandia_zebra
ENSACAG00000000434	SNRNP200	96	97.210	ENSMGAG00000001831	SNRNP200	99	97.210	Meleagris_gallopavo
ENSACAG00000000434	SNRNP200	100	97.439	ENSMAUG00000011825	Snrnp200	99	97.439	Mesocricetus_auratus
ENSACAG00000000434	SNRNP200	100	97.555	ENSMICG00000004710	SNRNP200	99	97.555	Microcebus_murinus
ENSACAG00000000434	SNRNP200	100	94.296	ENSMOCG00000011814	Snrnp200	99	94.296	Microtus_ochrogaster
ENSACAG00000000434	SNRNP200	100	87.776	ENSMMOG00000014167	snrnp200	99	87.776	Mola_mola
ENSACAG00000000434	SNRNP200	100	97.381	ENSMODG00000008475	SNRNP200	99	97.381	Monodelphis_domestica
ENSACAG00000000434	SNRNP200	100	89.930	ENSMALG00000001973	snrnp200	99	89.930	Monopterus_albus
ENSACAG00000000434	SNRNP200	100	97.264	MGP_CAROLIEiJ_G0024250	Snrnp200	99	97.264	Mus_caroli
ENSACAG00000000434	SNRNP200	100	97.264	ENSMUSG00000003660	Snrnp200	99	97.264	Mus_musculus
ENSACAG00000000434	SNRNP200	100	97.322	MGP_PahariEiJ_G0025695	Snrnp200	99	97.322	Mus_pahari
ENSACAG00000000434	SNRNP200	100	97.264	MGP_SPRETEiJ_G0025170	Snrnp200	99	97.264	Mus_spretus
ENSACAG00000000434	SNRNP200	100	97.497	ENSMPUG00000008949	SNRNP200	99	97.497	Mustela_putorius_furo
ENSACAG00000000434	SNRNP200	100	97.037	ENSMLUG00000010493	SNRNP200	99	97.037	Myotis_lucifugus
ENSACAG00000000434	SNRNP200	100	93.714	ENSMLUG00000027511	-	99	93.714	Myotis_lucifugus
ENSACAG00000000434	SNRNP200	100	97.497	ENSNGAG00000021993	Snrnp200	99	97.497	Nannospalax_galili
ENSACAG00000000434	SNRNP200	89	89.567	ENSNBRG00000017960	snrnp200	97	89.567	Neolamprologus_brichardi
ENSACAG00000000434	SNRNP200	100	91.633	ENSNLEG00000000025	SNRNP200	98	94.529	Nomascus_leucogenys
ENSACAG00000000434	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	74	100.000	Notamacropus_eugenii
ENSACAG00000000434	SNRNP200	95	95.604	ENSOPRG00000015464	SNRNP200	99	92.608	Ochotona_princeps
ENSACAG00000000434	SNRNP200	100	97.264	ENSODEG00000008366	SNRNP200	99	97.264	Octodon_degus
ENSACAG00000000434	SNRNP200	100	89.697	ENSONIG00000010714	snrnp200	99	89.697	Oreochromis_niloticus
ENSACAG00000000434	SNRNP200	100	97.322	ENSOCUG00000009864	SNRNP200	99	97.322	Oryctolagus_cuniculus
ENSACAG00000000434	SNRNP200	100	89.290	ENSORLG00000012286	snrnp200	99	89.290	Oryzias_latipes
ENSACAG00000000434	SNRNP200	100	89.406	ENSORLG00020004648	snrnp200	99	89.406	Oryzias_latipes_hni
ENSACAG00000000434	SNRNP200	100	89.348	ENSORLG00015019114	snrnp200	99	89.348	Oryzias_latipes_hsok
ENSACAG00000000434	SNRNP200	100	89.523	ENSOMEG00000011834	snrnp200	99	89.523	Oryzias_melastigma
ENSACAG00000000434	SNRNP200	100	97.555	ENSOGAG00000006879	SNRNP200	99	97.555	Otolemur_garnettii
ENSACAG00000000434	SNRNP200	100	97.033	ENSOARG00000013949	SNRNP200	99	97.033	Ovis_aries
ENSACAG00000000434	SNRNP200	100	97.612	ENSPPAG00000041559	SNRNP200	99	97.612	Pan_paniscus
ENSACAG00000000434	SNRNP200	100	97.555	ENSPPRG00000004435	SNRNP200	99	97.555	Panthera_pardus
ENSACAG00000000434	SNRNP200	100	97.031	ENSPTIG00000006380	SNRNP200	99	97.031	Panthera_tigris_altaica
ENSACAG00000000434	SNRNP200	100	97.612	ENSPTRG00000012230	SNRNP200	99	97.612	Pan_troglodytes
ENSACAG00000000434	SNRNP200	100	97.605	ENSPANG00000006017	SNRNP200	99	97.605	Papio_anubis
ENSACAG00000000434	SNRNP200	100	90.221	ENSPKIG00000014762	snrnp200	99	90.221	Paramormyrops_kingsleyae
ENSACAG00000000434	SNRNP200	100	96.568	ENSPSIG00000008580	SNRNP200	99	96.568	Pelodiscus_sinensis
ENSACAG00000000434	SNRNP200	51	98.469	ENSPEMG00000020700	-	98	98.469	Peromyscus_maniculatus_bairdii
ENSACAG00000000434	SNRNP200	100	97.381	ENSPCIG00000023050	SNRNP200	99	97.381	Phascolarctos_cinereus
ENSACAG00000000434	SNRNP200	100	90.111	ENSPFOG00000015110	snrnp200	99	90.111	Poecilia_formosa
ENSACAG00000000434	SNRNP200	97	89.982	ENSPLAG00000006711	snrnp200	99	89.982	Poecilia_latipinna
ENSACAG00000000434	SNRNP200	97	89.862	ENSPMEG00000021166	snrnp200	99	89.862	Poecilia_mexicana
ENSACAG00000000434	SNRNP200	100	89.988	ENSPREG00000008875	snrnp200	99	89.988	Poecilia_reticulata
ENSACAG00000000434	SNRNP200	100	97.497	ENSPPYG00000012068	SNRNP200	99	97.497	Pongo_abelii
ENSACAG00000000434	SNRNP200	94	97.945	ENSPCAG00000008536	SNRNP200	85	97.945	Procavia_capensis
ENSACAG00000000434	SNRNP200	100	97.497	ENSPCOG00000024608	SNRNP200	99	97.497	Propithecus_coquereli
ENSACAG00000000434	SNRNP200	95	99.660	ENSPVAG00000005860	SNRNP200	92	99.660	Pteropus_vampyrus
ENSACAG00000000434	SNRNP200	100	84.871	ENSPNYG00000017476	snrnp200	99	84.871	Pundamilia_nyererei
ENSACAG00000000434	SNRNP200	100	83.993	ENSPNAG00000010998	snrnp200	99	83.993	Pygocentrus_nattereri
ENSACAG00000000434	SNRNP200	100	97.439	ENSRNOG00000012157	Snrnp200	99	97.439	Rattus_norvegicus
ENSACAG00000000434	SNRNP200	100	97.497	ENSRBIG00000044690	-	99	97.497	Rhinopithecus_bieti
ENSACAG00000000434	SNRNP200	100	97.497	ENSRROG00000037952	-	99	97.497	Rhinopithecus_roxellana
ENSACAG00000000434	SNRNP200	100	97.497	ENSSBOG00000035471	SNRNP200	99	97.497	Saimiri_boliviensis_boliviensis
ENSACAG00000000434	SNRNP200	96	97.210	ENSSHAG00000000758	SNRNP200	99	97.210	Sarcophilus_harrisii
ENSACAG00000000434	SNRNP200	100	90.396	ENSSFOG00015018826	snrnp200	99	90.396	Scleropages_formosus
ENSACAG00000000434	SNRNP200	100	89.872	ENSSMAG00000005463	snrnp200	99	89.872	Scophthalmus_maximus
ENSACAG00000000434	SNRNP200	100	89.930	ENSSDUG00000021410	snrnp200	99	89.930	Seriola_dumerili
ENSACAG00000000434	SNRNP200	100	90.047	ENSSLDG00000010884	snrnp200	99	90.047	Seriola_lalandi_dorsalis
ENSACAG00000000434	SNRNP200	95	98.660	ENSSARG00000010728	SNRNP200	94	98.660	Sorex_araneus
ENSACAG00000000434	SNRNP200	100	97.555	ENSSPUG00000003726	-	99	97.555	Sphenodon_punctatus
ENSACAG00000000434	SNRNP200	100	90.047	ENSSPAG00000001842	snrnp200	99	90.047	Stegastes_partitus
ENSACAG00000000434	SNRNP200	100	97.497	ENSSSCG00000008127	SNRNP200	99	97.497	Sus_scrofa
ENSACAG00000000434	SNRNP200	98	88.037	ENSTGUG00000014475	-	100	88.037	Taeniopygia_guttata
ENSACAG00000000434	SNRNP200	100	89.523	ENSTRUG00000001307	snrnp200	99	89.523	Takifugu_rubripes
ENSACAG00000000434	SNRNP200	100	85.724	ENSTNIG00000004320	snrnp200	96	85.724	Tetraodon_nigroviridis
ENSACAG00000000434	SNRNP200	79	98.788	ENSTBEG00000003329	-	55	98.788	Tupaia_belangeri
ENSACAG00000000434	SNRNP200	100	97.264	ENSTTRG00000004983	SNRNP200	99	97.264	Tursiops_truncatus
ENSACAG00000000434	SNRNP200	82	91.667	ENSUAMG00000008395	-	95	91.667	Ursus_americanus
ENSACAG00000000434	SNRNP200	100	97.555	ENSUMAG00000012385	SNRNP200	99	97.555	Ursus_maritimus
ENSACAG00000000434	SNRNP200	92	98.276	ENSVPAG00000006434	SNRNP200	58	98.276	Vicugna_pacos
ENSACAG00000000434	SNRNP200	100	97.272	ENSVVUG00000026247	SNRNP200	99	97.481	Vulpes_vulpes
ENSACAG00000000434	SNRNP200	100	93.946	ENSXETG00000001243	snrnp200	99	93.946	Xenopus_tropicalis
ENSACAG00000000434	SNRNP200	97	89.862	ENSXMAG00000002058	snrnp200	97	89.862	Xiphophorus_maculatus