EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000000452 (Gene tree)
Gene ID: 100564882
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 40554 bases
Position: chrGL343734.1:20325-60878
Accession: 100564882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000023358	cwf21	PF08312.12	2e-15	1	1
ENSACAP00000000431	cwf21	PF08312.12	2e-15	1	1
ENSACAP00000000431	SRRM_C	PF15230.6	4.7e-13	1	1
ENSACAP00000023358	SRRM_C	PF15230.6	8.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000030778	SRRM3-201	4905	XM_008122666	ENSACAP00000023358	566 (aa)	XP_008120873	R4GDA9
ENSACAT00000000448	SRRM3-202	1776	-	ENSACAP00000000431	582 (aa)	-	H9G3R9

Gene Model

Click here to download ENSACAG00000000452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000000452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000000452	SRRM3	51	64.605	ENSG00000177679	SRRM3	87	51.178	Homo_sapiens
ENSACAG00000000452	SRRM3	98	59.445	ENSAPLG00000004545	SRRM3	92	58.491	Anas_platyrhynchos
ENSACAG00000000452	SRRM3	50	58.392	ENSBTAG00000007879	-	94	56.615	Bos_taurus
ENSACAG00000000452	SRRM3	50	66.084	ENSCJAG00000016307	SRRM3	87	52.062	Callithrix_jacchus
ENSACAG00000000452	SRRM3	51	64.828	ENSCAFG00000013537	SRRM3	78	63.259	Canis_familiaris
ENSACAG00000000452	SRRM3	50	55.892	ENSCPOG00000038685	SRRM3	87	47.804	Cavia_porcellus
ENSACAG00000000452	SRRM3	50	66.084	ENSCCAG00000033359	SRRM3	87	52.234	Cebus_capucinus
ENSACAG00000000452	SRRM3	58	80.851	ENSCATG00000043129	SRRM3	85	45.951	Cercocebus_atys
ENSACAG00000000452	SRRM3	73	64.828	ENSCLAG00000007682	SRRM3	93	73.043	Chinchilla_lanigera
ENSACAG00000000452	SRRM3	50	66.084	ENSCSAG00000018140	SRRM3	98	51.753	Chlorocebus_sabaeus
ENSACAG00000000452	SRRM3	98	73.333	ENSCPBG00000027784	SRRM3	88	74.382	Chrysemys_picta_bellii
ENSACAG00000000452	SRRM3	50	65.035	ENSCGRG00001011385	Srrm3	87	50.842	Cricetulus_griseus_chok1gshd
ENSACAG00000000452	SRRM3	50	66.434	ENSEASG00005016840	-	84	62.848	Equus_asinus_asinus
ENSACAG00000000452	SRRM3	50	66.434	ENSECAG00000022142	-	85	62.769	Equus_caballus
ENSACAG00000000452	SRRM3	50	66.434	ENSFCAG00000044112	SRRM3	87	51.635	Felis_catus
ENSACAG00000000452	SRRM3	99	68.385	ENSFALG00000009603	SRRM3	89	68.385	Ficedula_albicollis
ENSACAG00000000452	SRRM3	60	79.882	ENSGALG00000001932	SRRM3	73	81.288	Gallus_gallus
ENSACAG00000000452	SRRM3	98	73.509	ENSGAGG00000021058	SRRM3	95	73.227	Gopherus_agassizii
ENSACAG00000000452	SRRM3	80	64.706	ENSSTOG00000014181	SRRM3	93	74.783	Ictidomys_tridecemlineatus
ENSACAG00000000452	SRRM3	55	55.418	ENSJJAG00000023441	Srrm3	96	45.364	Jaculus_jaculus
ENSACAG00000000452	SRRM3	89	53.321	ENSLACG00000008008	SRRM3	99	52.037	Latimeria_chalumnae
ENSACAG00000000452	SRRM3	57	60.681	ENSLOCG00000002879	SRRM3	94	58.282	Lepisosteus_oculatus
ENSACAG00000000452	SRRM3	58	81.571	ENSMGAG00000003690	SRRM3	85	79.817	Meleagris_gallopavo
ENSACAG00000000452	SRRM3	50	64.685	ENSMAUG00000017613	Srrm3	93	73.913	Mesocricetus_auratus
ENSACAG00000000452	SRRM3	50	65.385	ENSMOCG00000002565	Srrm3	87	50.592	Microtus_ochrogaster
ENSACAG00000000452	SRRM3	56	71.429	ENSMODG00000029593	SRRM3	50	73.312	Monodelphis_domestica
ENSACAG00000000452	SRRM3	50	64.685	MGP_CAROLIEiJ_G0027845	-	94	61.846	Mus_caroli
ENSACAG00000000452	SRRM3	50	64.336	ENSMUSG00000039860	Srrm3	88	76.147	Mus_musculus
ENSACAG00000000452	SRRM3	50	63.986	MGP_PahariEiJ_G0024425	Srrm3	88	75.229	Mus_pahari
ENSACAG00000000452	SRRM3	50	64.336	MGP_SPRETEiJ_G0028844	Srrm3	88	76.147	Mus_spretus
ENSACAG00000000452	SRRM3	57	64.220	ENSOGAG00000030805	SRRM3	87	51.531	Otolemur_garnettii
ENSACAG00000000452	SRRM3	51	64.948	ENSPTRG00000019317	SRRM3	87	51.515	Pan_troglodytes
ENSACAG00000000452	SRRM3	99	62.329	ENSPSIG00000007850	SRRM3	98	60.906	Pelodiscus_sinensis
ENSACAG00000000452	SRRM3	70	55.000	ENSPCAG00000013700	SRRM3	55	50.774	Procavia_capensis
ENSACAG00000000452	SRRM3	57	63.914	ENSPCOG00000028464	SRRM3	87	51.111	Propithecus_coquereli
ENSACAG00000000452	SRRM3	50	62.937	ENSRNOG00000001439	Srrm3	87	50.345	Rattus_norvegicus
ENSACAG00000000452	SRRM3	54	57.419	ENSSFOG00015001696	SRRM3	77	55.821	Scleropages_formosus