EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000000682 (Gene tree)
Gene ID: 100558502
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 29591 bases
Position: chrGL343563.1:121122-150712
Accession: 100558502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000000820	PUF	PF00806.19	1.4e-72	1	8
ENSACAP00000000820	PUF	PF00806.19	1.4e-72	2	8
ENSACAP00000000820	PUF	PF00806.19	1.4e-72	3	8
ENSACAP00000000820	PUF	PF00806.19	1.4e-72	4	8
ENSACAP00000000820	PUF	PF00806.19	1.4e-72	5	8
ENSACAP00000000820	PUF	PF00806.19	1.4e-72	6	8
ENSACAP00000000820	PUF	PF00806.19	1.4e-72	7	8
ENSACAP00000000820	PUF	PF00806.19	1.4e-72	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000000846	PUM1-201	5623	XM_003228018	ENSACAP00000000820	1208 (aa)	XP_003228066	H9G4C8

Gene Model

Click here to download ENSACAG00000000682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000000682's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000000682	PUM1	88	76.443	ENSACAG00000010491	PUM2	100	76.071

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000000682	PUM1	98	95.875	ENSG00000134644	PUM1	99	98.309	Homo_sapiens
ENSACAG00000000682	PUM1	88	91.566	ENSAPOG00000021632	pum1	100	91.566	Acanthochromis_polyacanthus
ENSACAG00000000682	PUM1	98	95.638	ENSAMEG00000017656	PUM1	97	95.638	Ailuropoda_melanoleuca
ENSACAG00000000682	PUM1	98	76.036	ENSACIG00000021013	pum1	100	76.534	Amphilophus_citrinellus
ENSACAG00000000682	PUM1	88	91.566	ENSAOCG00000003944	pum1	100	76.656	Amphiprion_ocellaris
ENSACAG00000000682	PUM1	88	91.566	ENSAPEG00000014550	pum1	100	76.656	Amphiprion_percula
ENSACAG00000000682	PUM1	88	88.506	ENSATEG00000016004	pum1	100	76.490	Anabas_testudineus
ENSACAG00000000682	PUM1	98	96.804	ENSAPLG00000009351	PUM1	100	96.804	Anas_platyrhynchos
ENSACAG00000000682	PUM1	98	95.627	ENSANAG00000027865	PUM1	100	98.068	Aotus_nancymaae
ENSACAG00000000682	PUM1	88	78.499	ENSACLG00000019354	pum1	100	78.962	Astatotilapia_calliptera
ENSACAG00000000682	PUM1	98	79.181	ENSAMXG00000020607	pum1	97	78.846	Astyanax_mexicanus
ENSACAG00000000682	PUM1	98	95.623	ENSBTAG00000018979	PUM1	100	99.034	Bos_taurus
ENSACAG00000000682	PUM1	98	95.711	ENSCJAG00000006035	PUM1	100	98.309	Callithrix_jacchus
ENSACAG00000000682	PUM1	98	92.839	ENSCAFG00000011205	PUM1	100	93.682	Canis_familiaris
ENSACAG00000000682	PUM1	89	94.747	ENSCAFG00020024616	PUM1	98	98.551	Canis_lupus_dingo
ENSACAG00000000682	PUM1	98	95.623	ENSCHIG00000012952	PUM1	100	98.551	Capra_hircus
ENSACAG00000000682	PUM1	98	95.458	ENSTSYG00000008868	PUM1	100	96.389	Carlito_syrichta
ENSACAG00000000682	PUM1	98	95.290	ENSCPOG00000031613	PUM1	100	95.890	Cavia_porcellus
ENSACAG00000000682	PUM1	98	92.917	ENSCATG00000017991	PUM1	100	98.792	Cercocebus_atys
ENSACAG00000000682	PUM1	98	95.374	ENSCLAG00000007662	PUM1	100	97.826	Chinchilla_lanigera
ENSACAG00000000682	PUM1	98	94.333	ENSCSAG00000001028	PUM1	100	94.500	Chlorocebus_sabaeus
ENSACAG00000000682	PUM1	92	91.691	ENSCHOG00000010245	PUM1	93	89.828	Choloepus_hoffmanni
ENSACAG00000000682	PUM1	98	96.641	ENSCPBG00000009288	PUM1	100	99.275	Chrysemys_picta_bellii
ENSACAG00000000682	PUM1	99	95.641	ENSCANG00000042606	PUM1	100	98.309	Colobus_angolensis_palliatus
ENSACAG00000000682	PUM1	98	95.198	ENSCGRG00001024949	Pum1	100	95.885	Cricetulus_griseus_chok1gshd
ENSACAG00000000682	PUM1	98	95.198	ENSCGRG00000014197	Pum1	100	95.885	Cricetulus_griseus_crigri
ENSACAG00000000682	PUM1	88	77.778	ENSCSEG00000015981	pum1	100	78.035	Cynoglossus_semilaevis
ENSACAG00000000682	PUM1	98	75.745	ENSCVAG00000007043	pum1	100	75.993	Cyprinodon_variegatus
ENSACAG00000000682	PUM1	98	79.313	ENSDARG00000099256	pum1	100	79.062	Danio_rerio
ENSACAG00000000682	PUM1	98	95.206	ENSDNOG00000010939	PUM1	100	95.206	Dasypus_novemcinctus
ENSACAG00000000682	PUM1	82	97.826	ENSDORG00000001875	Pum1	100	97.826	Dipodomys_ordii
ENSACAG00000000682	PUM1	86	90.723	ENSETEG00000004355	PUM1	87	90.820	Echinops_telfairi
ENSACAG00000000682	PUM1	98	95.539	ENSEASG00005010813	PUM1	100	95.623	Equus_asinus_asinus
ENSACAG00000000682	PUM1	98	95.290	ENSECAG00000021369	PUM1	100	95.290	Equus_caballus
ENSACAG00000000682	PUM1	75	99.333	ENSEEUG00000003871	PUM1	75	99.333	Erinaceus_europaeus
ENSACAG00000000682	PUM1	98	76.422	ENSELUG00000002409	pum1	100	83.002	Esox_lucius
ENSACAG00000000682	PUM1	98	95.879	ENSFCAG00000010374	PUM1	100	99.034	Felis_catus
ENSACAG00000000682	PUM1	98	94.152	ENSFALG00000001214	PUM1	97	94.152	Ficedula_albicollis
ENSACAG00000000682	PUM1	98	95.374	ENSFDAG00000011319	PUM1	100	95.890	Fukomys_damarensis
ENSACAG00000000682	PUM1	98	97.056	ENSGALG00000042598	PUM1	99	99.393	Gallus_gallus
ENSACAG00000000682	PUM1	88	88.046	ENSGAFG00000015617	pum1	100	91.084	Gambusia_affinis
ENSACAG00000000682	PUM1	98	76.383	ENSGACG00000005717	pum1	100	76.485	Gasterosteus_aculeatus
ENSACAG00000000682	PUM1	98	96.552	ENSGAGG00000001290	PUM1	99	99.190	Gopherus_agassizii
ENSACAG00000000682	PUM1	99	94.938	ENSGGOG00000011983	PUM1	100	98.309	Gorilla_gorilla
ENSACAG00000000682	PUM1	98	76.076	ENSHBUG00000018718	pum1	100	76.407	Haplochromis_burtoni
ENSACAG00000000682	PUM1	98	95.122	ENSHGLG00000013819	Pum1	100	95.641	Heterocephalus_glaber_female
ENSACAG00000000682	PUM1	98	95.122	ENSHGLG00100008621	Pum1	100	95.641	Heterocephalus_glaber_male
ENSACAG00000000682	PUM1	88	74.421	ENSHCOG00000005149	pum1	100	75.348	Hippocampus_comes
ENSACAG00000000682	PUM1	98	77.667	ENSIPUG00000020421	pum1	100	77.787	Ictalurus_punctatus
ENSACAG00000000682	PUM1	98	95.623	ENSSTOG00000010757	PUM1	100	96.139	Ictidomys_tridecemlineatus
ENSACAG00000000682	PUM1	98	95.202	ENSJJAG00000000530	Pum1	100	95.286	Jaculus_jaculus
ENSACAG00000000682	PUM1	98	75.828	ENSKMAG00000003481	pum1	100	76.076	Kryptolebias_marmoratus
ENSACAG00000000682	PUM1	98	75.290	ENSLBEG00000002527	pum1	100	75.871	Labrus_bergylta
ENSACAG00000000682	PUM1	98	86.213	ENSLACG00000017188	PUM1	99	86.545	Latimeria_chalumnae
ENSACAG00000000682	PUM1	98	88.314	ENSLOCG00000005210	pum1	99	88.397	Lepisosteus_oculatus
ENSACAG00000000682	PUM1	98	95.374	ENSLAFG00000003178	PUM1	100	94.701	Loxodonta_africana
ENSACAG00000000682	PUM1	98	95.868	ENSMFAG00000010291	PUM1	100	98.792	Macaca_fascicularis
ENSACAG00000000682	PUM1	98	95.390	ENSMMUG00000013520	PUM1	100	98.309	Macaca_mulatta
ENSACAG00000000682	PUM1	98	95.875	ENSMNEG00000034639	PUM1	100	98.309	Macaca_nemestrina
ENSACAG00000000682	PUM1	98	95.875	ENSMLEG00000038743	PUM1	100	98.309	Mandrillus_leucophaeus
ENSACAG00000000682	PUM1	98	76.076	ENSMAMG00000011606	pum1	100	76.407	Mastacembelus_armatus
ENSACAG00000000682	PUM1	98	76.076	ENSMZEG00005005834	pum1	100	76.407	Maylandia_zebra
ENSACAG00000000682	PUM1	98	96.804	ENSMGAG00000000724	PUM1	100	96.804	Meleagris_gallopavo
ENSACAG00000000682	PUM1	98	95.202	ENSMAUG00000022090	Pum1	100	96.135	Mesocricetus_auratus
ENSACAG00000000682	PUM1	98	95.627	ENSMICG00000007713	-	100	98.551	Microcebus_murinus
ENSACAG00000000682	PUM1	98	93.283	ENSMICG00000012213	-	100	95.169	Microcebus_murinus
ENSACAG00000000682	PUM1	98	95.202	ENSMOCG00000015463	Pum1	100	95.885	Microtus_ochrogaster
ENSACAG00000000682	PUM1	88	88.276	ENSMMOG00000019817	pum1	100	91.325	Mola_mola
ENSACAG00000000682	PUM1	98	95.798	ENSMODG00000017067	PUM1	100	95.882	Monodelphis_domestica
ENSACAG00000000682	PUM1	88	88.506	ENSMALG00000016399	pum1	100	91.566	Monopterus_albus
ENSACAG00000000682	PUM1	98	95.034	MGP_CAROLIEiJ_G0026549	Pum1	100	95.392	Mus_caroli
ENSACAG00000000682	PUM1	98	95.118	ENSMUSG00000028580	Pum1	100	95.268	Mus_musculus
ENSACAG00000000682	PUM1	98	94.949	MGP_PahariEiJ_G0028881	Pum1	100	95.268	Mus_pahari
ENSACAG00000000682	PUM1	98	95.034	MGP_SPRETEiJ_G0027529	Pum1	100	95.268	Mus_spretus
ENSACAG00000000682	PUM1	98	95.875	ENSMPUG00000015454	PUM1	100	95.960	Mustela_putorius_furo
ENSACAG00000000682	PUM1	98	95.290	ENSMLUG00000006490	PUM1	100	95.290	Myotis_lucifugus
ENSACAG00000000682	PUM1	98	95.539	ENSNGAG00000002378	Pum1	100	96.264	Nannospalax_galili
ENSACAG00000000682	PUM1	78	83.292	ENSNBRG00000010689	pum1	100	83.045	Neolamprologus_brichardi
ENSACAG00000000682	PUM1	98	94.529	ENSNLEG00000001151	PUM1	100	95.139	Nomascus_leucogenys
ENSACAG00000000682	PUM1	75	95.455	ENSMEUG00000000976	-	74	95.455	Notamacropus_eugenii
ENSACAG00000000682	PUM1	81	98.131	ENSOPRG00000001776	PUM1	75	98.131	Ochotona_princeps
ENSACAG00000000682	PUM1	98	95.370	ENSODEG00000003465	PUM1	100	95.766	Octodon_degus
ENSACAG00000000682	PUM1	98	76.514	ENSONIG00000002290	pum1	100	76.573	Oreochromis_niloticus
ENSACAG00000000682	PUM1	80	76.609	ENSOANG00000004902	-	100	75.383	Ornithorhynchus_anatinus
ENSACAG00000000682	PUM1	98	95.122	ENSOCUG00000008641	PUM1	99	95.206	Oryctolagus_cuniculus
ENSACAG00000000682	PUM1	98	76.568	ENSORLG00000011482	pum1	100	76.155	Oryzias_latipes
ENSACAG00000000682	PUM1	98	76.650	ENSORLG00020019461	pum1	100	76.238	Oryzias_latipes_hni
ENSACAG00000000682	PUM1	98	76.650	ENSORLG00015011375	pum1	100	76.238	Oryzias_latipes_hsok
ENSACAG00000000682	PUM1	88	90.115	ENSOMEG00000009312	pum1	100	91.325	Oryzias_melastigma
ENSACAG00000000682	PUM1	98	92.695	ENSOGAG00000011063	PUM1	100	92.695	Otolemur_garnettii
ENSACAG00000000682	PUM1	98	94.870	ENSOARG00000001899	PUM1	100	98.551	Ovis_aries
ENSACAG00000000682	PUM1	99	94.938	ENSPPAG00000044003	PUM1	100	98.309	Pan_paniscus
ENSACAG00000000682	PUM1	98	95.875	ENSPPRG00000001370	PUM1	100	96.513	Panthera_pardus
ENSACAG00000000682	PUM1	98	95.707	ENSPTIG00000010798	PUM1	100	96.264	Panthera_tigris_altaica
ENSACAG00000000682	PUM1	99	94.938	ENSPTRG00000000453	PUM1	100	98.309	Pan_troglodytes
ENSACAG00000000682	PUM1	98	95.875	ENSPANG00000016338	PUM1	100	98.792	Papio_anubis
ENSACAG00000000682	PUM1	92	93.720	ENSPKIG00000010578	pum1	100	78.182	Paramormyrops_kingsleyae
ENSACAG00000000682	PUM1	98	96.801	ENSPSIG00000014118	PUM1	100	96.801	Pelodiscus_sinensis
ENSACAG00000000682	PUM1	78	81.740	ENSPMGG00000005836	pum1	100	81.495	Periophthalmus_magnuspinnatus
ENSACAG00000000682	PUM1	98	95.202	ENSPEMG00000010009	Pum1	100	96.135	Peromyscus_maniculatus_bairdii
ENSACAG00000000682	PUM1	98	95.714	ENSPCIG00000014151	PUM1	100	99.275	Phascolarctos_cinereus
ENSACAG00000000682	PUM1	93	77.544	ENSPFOG00000007289	pum1	99	83.282	Poecilia_formosa
ENSACAG00000000682	PUM1	98	73.570	ENSPLAG00000007256	pum1	100	77.882	Poecilia_latipinna
ENSACAG00000000682	PUM1	88	77.470	ENSPMEG00000019543	pum1	99	78.065	Poecilia_mexicana
ENSACAG00000000682	PUM1	98	76.242	ENSPREG00000005195	pum1	100	80.923	Poecilia_reticulata
ENSACAG00000000682	PUM1	98	93.894	ENSPPYG00000001621	PUM1	100	93.894	Pongo_abelii
ENSACAG00000000682	PUM1	76	99.074	ENSPCAG00000001979	PUM1	74	99.074	Procavia_capensis
ENSACAG00000000682	PUM1	98	95.627	ENSPCOG00000004398	PUM1	100	98.551	Propithecus_coquereli
ENSACAG00000000682	PUM1	98	93.619	ENSPVAG00000005207	PUM1	97	93.619	Pteropus_vampyrus
ENSACAG00000000682	PUM1	98	76.159	ENSPNYG00000009518	pum1	100	76.490	Pundamilia_nyererei
ENSACAG00000000682	PUM1	98	79.397	ENSPNAG00000026728	pum1	100	80.230	Pygocentrus_nattereri
ENSACAG00000000682	PUM1	98	94.949	ENSRNOG00000011709	Pum1	100	95.034	Rattus_norvegicus
ENSACAG00000000682	PUM1	99	95.725	ENSRBIG00000042521	PUM1	100	98.792	Rhinopithecus_bieti
ENSACAG00000000682	PUM1	98	95.802	ENSRROG00000020156	PUM1	100	98.309	Rhinopithecus_roxellana
ENSACAG00000000682	PUM1	98	95.963	ENSSBOG00000032037	PUM1	100	98.309	Saimiri_boliviensis_boliviensis
ENSACAG00000000682	PUM1	98	95.882	ENSSHAG00000010918	PUM1	100	95.882	Sarcophilus_harrisii
ENSACAG00000000682	PUM1	88	88.506	ENSSMAG00000010918	pum1	100	91.566	Scophthalmus_maximus
ENSACAG00000000682	PUM1	98	76.076	ENSSDUG00000009021	pum1	100	76.656	Seriola_dumerili
ENSACAG00000000682	PUM1	94	77.882	ENSSLDG00000009667	pum1	100	78.505	Seriola_lalandi_dorsalis
ENSACAG00000000682	PUM1	92	95.179	ENSSARG00000003055	PUM1	92	95.179	Sorex_araneus
ENSACAG00000000682	PUM1	98	96.212	ENSSPUG00000006267	PUM1	100	96.296	Sphenodon_punctatus
ENSACAG00000000682	PUM1	88	88.506	ENSSPAG00000016636	pum1	100	76.656	Stegastes_partitus
ENSACAG00000000682	PUM1	98	97.773	ENSSSCG00000003591	PUM1	100	99.034	Sus_scrofa
ENSACAG00000000682	PUM1	98	76.139	ENSTRUG00000013121	pum1	100	83.045	Takifugu_rubripes
ENSACAG00000000682	PUM1	98	76.349	ENSTNIG00000016983	pum1	99	76.738	Tetraodon_nigroviridis
ENSACAG00000000682	PUM1	86	93.902	ENSTBEG00000013810	PUM1	89	93.902	Tupaia_belangeri
ENSACAG00000000682	PUM1	90	95.856	ENSTTRG00000007436	PUM1	89	95.856	Tursiops_truncatus
ENSACAG00000000682	PUM1	97	95.111	ENSUAMG00000018262	-	100	95.203	Ursus_americanus
ENSACAG00000000682	PUM1	92	99.034	ENSUMAG00000009211	PUM1	100	99.034	Ursus_maritimus
ENSACAG00000000682	PUM1	91	97.011	ENSVPAG00000005902	PUM1	92	97.011	Vicugna_pacos
ENSACAG00000000682	PUM1	98	95.711	ENSVVUG00000014631	PUM1	100	99.034	Vulpes_vulpes
ENSACAG00000000682	PUM1	98	87.270	ENSXETG00000012904	pum1	99	87.186	Xenopus_tropicalis
ENSACAG00000000682	PUM1	98	75.248	ENSXMAG00000002945	pum1	100	77.778	Xiphophorus_maculatus