EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000000818 (Gene tree)
Gene ID: 100559790
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 20137 bases
Position: chr5:90152592-90172728
Accession: 100559790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000000785	PRP4	PF08799.11	3.4e-13	1	1
ENSACAP00000022381	PRP4	PF08799.11	3.5e-13	1	1
ENSACAP00000000785	Prp18	PF02840.15	2.1e-62	1	1
ENSACAP00000022381	Prp18	PF02840.15	2.4e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000029798	-	3064	XM_003221449	ENSACAP00000022381	353 (aa)	XP_003221497	R4GAS4
ENSACAT00000000809	-	3037	XM_003221448	ENSACAP00000000785	344 (aa)	XP_003221496	G1K8V0

Gene Model

Click here to download ENSACAG00000000818's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000000818's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000000818	-	100	91.860	ENSG00000165630	PRPF18	100	91.860	Homo_sapiens
ENSACAG00000000818	-	100	85.465	ENSAPOG00000024177	prpf18	100	85.465	Acanthochromis_polyacanthus
ENSACAG00000000818	-	100	91.279	ENSAMEG00000013591	-	100	91.279	Ailuropoda_melanoleuca
ENSACAG00000000818	-	100	84.012	ENSACIG00000001186	prpf18	100	84.012	Amphilophus_citrinellus
ENSACAG00000000818	-	98	85.163	ENSAOCG00000006572	prpf18	94	83.188	Amphiprion_ocellaris
ENSACAG00000000818	-	100	85.465	ENSAPEG00000004564	prpf18	100	85.465	Amphiprion_percula
ENSACAG00000000818	-	100	84.012	ENSATEG00000000303	prpf18	100	84.012	Anabas_testudineus
ENSACAG00000000818	-	99	90.936	ENSAPLG00000003387	-	99	90.936	Anas_platyrhynchos
ENSACAG00000000818	-	100	91.570	ENSANAG00000037445	-	100	91.570	Aotus_nancymaae
ENSACAG00000000818	-	100	83.721	ENSACLG00000026296	prpf18	100	83.721	Astatotilapia_calliptera
ENSACAG00000000818	-	100	84.000	ENSAMXG00000012848	prpf18	100	84.000	Astyanax_mexicanus
ENSACAG00000000818	-	100	90.988	ENSBTAG00000017244	PRPF18	100	90.988	Bos_taurus
ENSACAG00000000818	-	98	38.527	WBGene00009320	F32B6.3	97	38.527	Caenorhabditis_elegans
ENSACAG00000000818	-	100	91.570	ENSCJAG00000009432	-	100	91.570	Callithrix_jacchus
ENSACAG00000000818	-	100	91.279	ENSCAFG00000004735	-	100	91.279	Canis_familiaris
ENSACAG00000000818	-	100	91.279	ENSCAFG00020007712	-	100	91.279	Canis_lupus_dingo
ENSACAG00000000818	-	100	90.988	ENSCHIG00000000499	-	100	90.988	Capra_hircus
ENSACAG00000000818	-	100	90.988	ENSTSYG00000003517	-	100	90.988	Carlito_syrichta
ENSACAG00000000818	-	100	91.860	ENSCPOG00000021069	-	100	91.860	Cavia_porcellus
ENSACAG00000000818	-	100	91.570	ENSCCAG00000036822	-	100	91.570	Cebus_capucinus
ENSACAG00000000818	-	100	81.105	ENSCATG00000016633	-	100	81.105	Cercocebus_atys
ENSACAG00000000818	-	100	91.279	ENSCLAG00000011770	-	100	91.279	Chinchilla_lanigera
ENSACAG00000000818	-	100	91.218	ENSCSAG00000013109	-	100	90.652	Chlorocebus_sabaeus
ENSACAG00000000818	-	100	88.283	ENSCPBG00000003100	-	100	89.665	Chrysemys_picta_bellii
ENSACAG00000000818	-	99	56.305	ENSCING00000020481	-	97	56.305	Ciona_intestinalis
ENSACAG00000000818	-	99	55.362	ENSCSAVG00000010546	-	99	54.942	Ciona_savignyi
ENSACAG00000000818	-	100	91.570	ENSCANG00000034900	-	100	91.570	Colobus_angolensis_palliatus
ENSACAG00000000818	-	100	91.279	ENSCGRG00001023665	Prpf18	100	91.279	Cricetulus_griseus_chok1gshd
ENSACAG00000000818	-	100	91.279	ENSCGRG00000014690	Prpf18	100	91.279	Cricetulus_griseus_crigri
ENSACAG00000000818	-	100	82.267	ENSCSEG00000005536	prpf18	99	82.267	Cynoglossus_semilaevis
ENSACAG00000000818	-	100	83.430	ENSCVAG00000012401	prpf18	100	83.430	Cyprinodon_variegatus
ENSACAG00000000818	-	100	85.465	ENSDARG00000058306	prpf18	100	85.465	Danio_rerio
ENSACAG00000000818	-	100	92.151	ENSDNOG00000035607	-	100	92.151	Dasypus_novemcinctus
ENSACAG00000000818	-	100	91.279	ENSDORG00000000858	Prpf18	100	91.279	Dipodomys_ordii
ENSACAG00000000818	-	99	51.320	FBgn0027784	Prp18	98	51.026	Drosophila_melanogaster
ENSACAG00000000818	-	100	81.395	ENSETEG00000015060	-	100	81.395	Echinops_telfairi
ENSACAG00000000818	-	100	67.435	ENSEBUG00000016502	prpf18	99	66.763	Eptatretus_burgeri
ENSACAG00000000818	-	100	91.570	ENSEASG00005019373	-	100	91.570	Equus_asinus_asinus
ENSACAG00000000818	-	100	91.570	ENSECAG00000006997	PRPF18	100	91.570	Equus_caballus
ENSACAG00000000818	-	74	100.000	ENSEEUG00000001171	-	79	100.000	Erinaceus_europaeus
ENSACAG00000000818	-	100	82.029	ENSELUG00000022190	prpf18	100	82.029	Esox_lucius
ENSACAG00000000818	-	100	90.988	ENSFCAG00000004436	-	100	90.988	Felis_catus
ENSACAG00000000818	-	93	91.131	ENSFALG00000001912	-	97	91.437	Ficedula_albicollis
ENSACAG00000000818	-	99	59.538	ENSFDAG00000010713	-	97	59.538	Fukomys_damarensis
ENSACAG00000000818	-	94	94.410	ENSFDAG00000014026	-	100	94.410	Fukomys_damarensis
ENSACAG00000000818	-	79	87.912	ENSFHEG00000020125	prpf18	98	88.015	Fundulus_heteroclitus
ENSACAG00000000818	-	99	79.300	ENSGMOG00000012210	prpf18	99	79.300	Gadus_morhua
ENSACAG00000000818	-	100	91.860	ENSGALG00000043593	-	100	91.860	Gallus_gallus
ENSACAG00000000818	-	100	83.430	ENSGAFG00000006034	prpf18	100	83.430	Gambusia_affinis
ENSACAG00000000818	-	100	81.105	ENSGACG00000012232	prpf18	100	81.105	Gasterosteus_aculeatus
ENSACAG00000000818	-	100	91.860	ENSGAGG00000016878	-	100	91.860	Gopherus_agassizii
ENSACAG00000000818	-	93	90.520	ENSGGOG00000025188	-	96	91.195	Gorilla_gorilla
ENSACAG00000000818	-	100	83.721	ENSHBUG00000010264	prpf18	100	83.721	Haplochromis_burtoni
ENSACAG00000000818	-	100	91.279	ENSHGLG00000018534	PRPF18	100	91.279	Heterocephalus_glaber_female
ENSACAG00000000818	-	94	93.210	ENSHGLG00100012161	-	98	93.789	Heterocephalus_glaber_male
ENSACAG00000000818	-	100	84.012	ENSHCOG00000015987	prpf18	100	84.012	Hippocampus_comes
ENSACAG00000000818	-	100	83.569	ENSIPUG00000007432	prpf18	100	83.569	Ictalurus_punctatus
ENSACAG00000000818	-	100	90.988	ENSSTOG00000008735	-	100	90.988	Ictidomys_tridecemlineatus
ENSACAG00000000818	-	100	91.860	ENSJJAG00000024041	-	100	91.860	Jaculus_jaculus
ENSACAG00000000818	-	100	67.246	ENSJJAG00000015191	-	100	67.246	Jaculus_jaculus
ENSACAG00000000818	-	100	83.140	ENSKMAG00000012124	prpf18	100	83.140	Kryptolebias_marmoratus
ENSACAG00000000818	-	97	82.090	ENSLBEG00000028466	prpf18	98	82.090	Labrus_bergylta
ENSACAG00000000818	-	100	86.337	ENSLACG00000009885	prpf18	100	86.337	Latimeria_chalumnae
ENSACAG00000000818	-	100	90.116	ENSLOCG00000016736	prpf18	100	90.116	Lepisosteus_oculatus
ENSACAG00000000818	-	100	91.860	ENSLAFG00000007753	-	100	91.860	Loxodonta_africana
ENSACAG00000000818	-	100	91.860	ENSMFAG00000000540	-	100	91.860	Macaca_fascicularis
ENSACAG00000000818	-	100	91.860	ENSMMUG00000015071	PRPF18	100	91.860	Macaca_mulatta
ENSACAG00000000818	-	100	91.860	ENSMNEG00000024679	-	100	91.860	Macaca_nemestrina
ENSACAG00000000818	-	100	76.744	ENSMLEG00000031715	-	100	76.744	Mandrillus_leucophaeus
ENSACAG00000000818	-	100	83.140	ENSMAMG00000006610	prpf18	100	83.140	Mastacembelus_armatus
ENSACAG00000000818	-	100	83.721	ENSMZEG00005019392	prpf18	100	83.721	Maylandia_zebra
ENSACAG00000000818	-	100	91.860	ENSMGAG00000005023	-	100	91.860	Meleagris_gallopavo
ENSACAG00000000818	-	100	91.570	ENSMICG00000006572	-	100	91.570	Microcebus_murinus
ENSACAG00000000818	-	100	91.860	ENSMOCG00000021468	Prpf18	100	91.860	Microtus_ochrogaster
ENSACAG00000000818	-	100	83.721	ENSMMOG00000013012	prpf18	100	83.721	Mola_mola
ENSACAG00000000818	-	96	88.824	ENSMODG00000016902	-	92	88.824	Monodelphis_domestica
ENSACAG00000000818	-	100	81.686	ENSMODG00000024043	-	100	81.686	Monodelphis_domestica
ENSACAG00000000818	-	100	77.907	ENSMALG00000005486	prpf18	100	78.488	Monopterus_albus
ENSACAG00000000818	-	100	91.860	MGP_CAROLIEiJ_G0023143	Prpf18	100	97.260	Mus_caroli
ENSACAG00000000818	-	100	91.570	ENSMUSG00000039449	Prpf18	100	97.260	Mus_musculus
ENSACAG00000000818	-	100	92.151	MGP_PahariEiJ_G0019203	Prpf18	100	97.260	Mus_pahari
ENSACAG00000000818	-	100	91.279	MGP_SPRETEiJ_G0024061	Prpf18	100	97.260	Mus_spretus
ENSACAG00000000818	-	100	90.988	ENSMPUG00000000938	-	100	90.988	Mustela_putorius_furo
ENSACAG00000000818	-	100	91.570	ENSMLUG00000009200	-	100	91.570	Myotis_lucifugus
ENSACAG00000000818	-	100	91.860	ENSNGAG00000012500	-	100	91.860	Nannospalax_galili
ENSACAG00000000818	-	67	89.130	ENSNGAG00000023550	-	82	89.130	Nannospalax_galili
ENSACAG00000000818	-	100	83.721	ENSNBRG00000001778	prpf18	100	83.721	Neolamprologus_brichardi
ENSACAG00000000818	-	100	91.860	ENSNLEG00000012186	-	100	91.860	Nomascus_leucogenys
ENSACAG00000000818	-	75	78.378	ENSMEUG00000005032	-	75	78.378	Notamacropus_eugenii
ENSACAG00000000818	-	78	72.659	ENSOPRG00000002153	-	100	72.659	Ochotona_princeps
ENSACAG00000000818	-	100	92.151	ENSODEG00000003770	-	100	92.151	Octodon_degus
ENSACAG00000000818	-	98	83.383	ENSONIG00000014854	prpf18	96	83.383	Oreochromis_niloticus
ENSACAG00000000818	-	100	91.279	ENSOANG00000015404	-	100	91.279	Ornithorhynchus_anatinus
ENSACAG00000000818	-	100	91.570	ENSOCUG00000027756	-	96	92.705	Oryctolagus_cuniculus
ENSACAG00000000818	-	100	82.720	ENSORLG00000010293	prpf18	100	82.571	Oryzias_latipes
ENSACAG00000000818	-	100	84.302	ENSORLG00020001530	prpf18	100	84.302	Oryzias_latipes_hni
ENSACAG00000000818	-	100	84.012	ENSORLG00015013705	prpf18	100	84.012	Oryzias_latipes_hsok
ENSACAG00000000818	-	100	85.756	ENSOMEG00000009167	prpf18	100	85.756	Oryzias_melastigma
ENSACAG00000000818	-	100	90.988	ENSOGAG00000007294	-	100	90.988	Otolemur_garnettii
ENSACAG00000000818	-	100	90.368	ENSOARG00000006243	-	100	90.368	Ovis_aries
ENSACAG00000000818	-	100	91.860	ENSPPAG00000041959	-	100	91.860	Pan_paniscus
ENSACAG00000000818	-	100	90.988	ENSPPRG00000000107	-	100	90.988	Panthera_pardus
ENSACAG00000000818	-	100	90.988	ENSPTIG00000021094	-	100	90.988	Panthera_tigris_altaica
ENSACAG00000000818	-	100	91.860	ENSPTRG00000002306	PRPF18	100	91.860	Pan_troglodytes
ENSACAG00000000818	-	100	91.570	ENSPANG00000023346	-	100	91.570	Papio_anubis
ENSACAG00000000818	-	86	98.113	ENSPKIG00000014128	prpf18	96	83.003	Paramormyrops_kingsleyae
ENSACAG00000000818	-	100	92.151	ENSPSIG00000016064	-	100	92.151	Pelodiscus_sinensis
ENSACAG00000000818	-	100	79.070	ENSPMGG00000016486	prpf18	100	79.070	Periophthalmus_magnuspinnatus
ENSACAG00000000818	-	100	91.570	ENSPEMG00000013704	Prpf18	100	91.570	Peromyscus_maniculatus_bairdii
ENSACAG00000000818	-	100	73.775	ENSPMAG00000000204	prpf18	100	73.775	Petromyzon_marinus
ENSACAG00000000818	-	93	90.826	ENSPCIG00000012963	-	99	91.509	Phascolarctos_cinereus
ENSACAG00000000818	-	100	81.143	ENSPFOG00000017611	prpf18	100	81.143	Poecilia_formosa
ENSACAG00000000818	-	100	82.558	ENSPLAG00000000369	prpf18	100	82.558	Poecilia_latipinna
ENSACAG00000000818	-	100	82.558	ENSPMEG00000005183	prpf18	100	82.558	Poecilia_mexicana
ENSACAG00000000818	-	100	82.558	ENSPREG00000015232	prpf18	100	82.558	Poecilia_reticulata
ENSACAG00000000818	-	100	91.570	ENSPPYG00000002101	PRPF18	100	91.570	Pongo_abelii
ENSACAG00000000818	-	100	74.128	ENSPCAG00000010833	-	100	74.128	Procavia_capensis
ENSACAG00000000818	-	100	84.884	ENSPCOG00000013057	-	100	84.884	Propithecus_coquereli
ENSACAG00000000818	-	100	55.814	ENSPVAG00000002947	-	100	55.814	Pteropus_vampyrus
ENSACAG00000000818	-	100	83.430	ENSPNYG00000003554	prpf18	100	83.430	Pundamilia_nyererei
ENSACAG00000000818	-	100	84.419	ENSPNAG00000023151	prpf18	100	84.330	Pygocentrus_nattereri
ENSACAG00000000818	-	100	90.988	ENSRNOG00000018396	Prpf18	100	90.988	Rattus_norvegicus
ENSACAG00000000818	-	100	91.279	ENSRBIG00000028028	-	100	91.279	Rhinopithecus_bieti
ENSACAG00000000818	-	100	91.570	ENSRROG00000040695	-	100	91.570	Rhinopithecus_roxellana
ENSACAG00000000818	-	100	91.570	ENSSBOG00000034482	-	100	91.570	Saimiri_boliviensis_boliviensis
ENSACAG00000000818	-	100	91.860	ENSSHAG00000016463	-	100	91.860	Sarcophilus_harrisii
ENSACAG00000000818	-	100	74.709	ENSSHAG00000009669	-	100	74.709	Sarcophilus_harrisii
ENSACAG00000000818	-	78	43.446	ENSSFOG00015021154	-	89	48.498	Scleropages_formosus
ENSACAG00000000818	-	98	82.709	ENSSFOG00015022118	prpf18	100	76.791	Scleropages_formosus
ENSACAG00000000818	-	100	82.267	ENSSMAG00000005308	prpf18	100	82.267	Scophthalmus_maximus
ENSACAG00000000818	-	100	84.302	ENSSDUG00000015428	prpf18	100	84.302	Seriola_dumerili
ENSACAG00000000818	-	100	84.302	ENSSLDG00000023989	prpf18	100	84.302	Seriola_lalandi_dorsalis
ENSACAG00000000818	-	100	61.919	ENSSARG00000005307	-	100	61.919	Sorex_araneus
ENSACAG00000000818	-	100	91.860	ENSSPUG00000002619	-	100	91.860	Sphenodon_punctatus
ENSACAG00000000818	-	100	84.302	ENSSPAG00000019502	prpf18	100	84.302	Stegastes_partitus
ENSACAG00000000818	-	100	91.279	ENSSSCG00000026354	-	100	91.279	Sus_scrofa
ENSACAG00000000818	-	100	92.442	ENSTGUG00000002286	-	100	92.442	Taeniopygia_guttata
ENSACAG00000000818	-	100	81.686	ENSTRUG00000011278	prpf18	100	81.686	Takifugu_rubripes
ENSACAG00000000818	-	100	82.267	ENSTNIG00000000911	prpf18	100	82.267	Tetraodon_nigroviridis
ENSACAG00000000818	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSACAG00000000818	-	100	92.151	ENSTTRG00000011117	PRPF18	100	92.151	Tursiops_truncatus
ENSACAG00000000818	-	91	93.930	ENSUAMG00000001815	-	93	93.930	Ursus_americanus
ENSACAG00000000818	-	100	86.628	ENSUMAG00000012329	-	100	86.628	Ursus_maritimus
ENSACAG00000000818	-	100	85.756	ENSVPAG00000011486	-	100	85.756	Vicugna_pacos
ENSACAG00000000818	-	100	91.279	ENSVVUG00000005453	-	100	91.279	Vulpes_vulpes
ENSACAG00000000818	-	100	80.115	ENSXETG00000024057	prpf18	100	80.115	Xenopus_tropicalis
ENSACAG00000000818	-	100	81.503	ENSXCOG00000020414	prpf18	100	81.503	Xiphophorus_couchianus
ENSACAG00000000818	-	100	82.267	ENSXMAG00000004713	prpf18	91	82.267	Xiphophorus_maculatus