EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000001006 (Gene tree)
Gene ID: 100567155
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 15181 bases
Position: chrGL343304.1:1620176-1635356
Accession: 100567155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000000994	RRM_1	PF00076.22	1.3e-58	1	4
ENSACAP00000000994	RRM_1	PF00076.22	1.3e-58	2	4
ENSACAP00000000994	RRM_1	PF00076.22	1.3e-58	3	4
ENSACAP00000000994	RRM_1	PF00076.22	1.3e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000001022	-	3676	XM_003225497	ENSACAP00000000994	726 (aa)	XP_003225545	H9G4M1

Gene Model

Click here to download ENSACAG00000001006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000001006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000001006	-	78	33.618	ENSAPOG00000014534	-	62	40.947	Acanthochromis_polyacanthus
ENSACAG00000001006	-	52	62.141	ENSAPOG00000023888	ncl	56	62.240	Acanthochromis_polyacanthus
ENSACAG00000001006	-	52	62.368	ENSACIG00000013234	ncl	62	62.467	Amphilophus_citrinellus
ENSACAG00000001006	-	52	62.924	ENSAOCG00000003133	ncl	53	63.021	Amphiprion_ocellaris
ENSACAG00000001006	-	68	35.249	ENSAOCG00000014792	-	61	39.370	Amphiprion_ocellaris
ENSACAG00000001006	-	52	62.924	ENSAPEG00000002769	ncl	52	63.021	Amphiprion_percula
ENSACAG00000001006	-	68	35.249	ENSAPEG00000013612	-	60	39.370	Amphiprion_percula
ENSACAG00000001006	-	70	39.279	ENSATEG00000019862	-	77	44.118	Anabas_testudineus
ENSACAG00000001006	-	52	63.969	ENSATEG00000013343	ncl	53	64.062	Anabas_testudineus
ENSACAG00000001006	-	52	59.162	ENSAMXG00000001647	ncl	81	62.376	Astyanax_mexicanus
ENSACAG00000001006	-	62	57.848	ENSCHIG00000003401	-	87	57.333	Capra_hircus
ENSACAG00000001006	-	90	61.782	ENSCPBG00000016444	-	94	62.406	Chrysemys_picta_bellii
ENSACAG00000001006	-	52	61.979	ENSCSEG00000015089	ncl	57	61.680	Cynoglossus_semilaevis
ENSACAG00000001006	-	63	64.368	ENSCVAG00000012600	ncl	54	61.942	Cyprinodon_variegatus
ENSACAG00000001006	-	52	63.802	ENSDARG00000002710	ncl	80	65.287	Danio_rerio
ENSACAG00000001006	-	52	51.309	ENSDNOG00000031611	-	79	49.888	Dasypus_novemcinctus
ENSACAG00000001006	-	50	51.233	ENSDNOG00000040257	-	61	50.954	Dasypus_novemcinctus
ENSACAG00000001006	-	56	45.477	ENSELUG00000022826	-	83	46.392	Esox_lucius
ENSACAG00000001006	-	52	60.519	ENSELUG00000006033	ncl	83	51.858	Esox_lucius
ENSACAG00000001006	-	53	67.857	ENSFALG00000007592	-	85	61.564	Ficedula_albicollis
ENSACAG00000001006	-	52	61.518	ENSFHEG00000018000	ncl	60	63.456	Fundulus_heteroclitus
ENSACAG00000001006	-	53	70.588	ENSGALG00000032930	NCL	85	63.651	Gallus_gallus
ENSACAG00000001006	-	52	62.895	ENSGAFG00000015375	ncl	50	62.992	Gambusia_affinis
ENSACAG00000001006	-	54	61.579	ENSGACG00000008970	ncl	91	51.742	Gasterosteus_aculeatus
ENSACAG00000001006	-	82	61.157	ENSGAGG00000013330	-	84	62.479	Gopherus_agassizii
ENSACAG00000001006	-	52	62.895	ENSHBUG00000006869	ncl	53	62.992	Haplochromis_burtoni
ENSACAG00000001006	-	54	62.060	ENSHCOG00000010234	ncl	52	63.731	Hippocampus_comes
ENSACAG00000001006	-	52	62.500	ENSLBEG00000019073	ncl	56	62.597	Labrus_bergylta
ENSACAG00000001006	-	51	42.487	ENSLBEG00000007915	-	63	42.933	Labrus_bergylta
ENSACAG00000001006	-	50	42.480	ENSLBEG00000014278	-	82	42.975	Labrus_bergylta
ENSACAG00000001006	-	63	47.198	ENSLACG00000022167	-	80	51.163	Latimeria_chalumnae
ENSACAG00000001006	-	53	64.213	ENSLACG00000009328	ncl	57	64.781	Latimeria_chalumnae
ENSACAG00000001006	-	52	62.992	ENSMAMG00000002086	ncl	62	53.697	Mastacembelus_armatus
ENSACAG00000001006	-	54	38.443	ENSMAMG00000003479	-	69	38.182	Mastacembelus_armatus
ENSACAG00000001006	-	52	62.632	ENSMZEG00005017438	ncl	53	62.730	Maylandia_zebra
ENSACAG00000001006	-	51	66.234	ENSMGAG00000008147	-	100	72.852	Meleagris_gallopavo
ENSACAG00000001006	-	52	66.067	ENSMODG00000002470	-	85	58.703	Monodelphis_domestica
ENSACAG00000001006	-	56	48.718	ENSMPUG00000001663	-	75	54.651	Mustela_putorius_furo
ENSACAG00000001006	-	52	68.325	ENSMEUG00000012335	-	55	68.135	Notamacropus_eugenii
ENSACAG00000001006	-	52	62.895	ENSONIG00000012508	ncl	83	51.360	Oreochromis_niloticus
ENSACAG00000001006	-	51	35.753	ENSONIG00000010631	-	95	35.598	Oreochromis_niloticus
ENSACAG00000001006	-	84	57.344	ENSOANG00000008732	-	72	64.482	Ornithorhynchus_anatinus
ENSACAG00000001006	-	53	37.056	ENSORLG00000004645	-	85	38.095	Oryzias_latipes
ENSACAG00000001006	-	58	35.780	ENSORLG00020003497	-	75	38.402	Oryzias_latipes_hni
ENSACAG00000001006	-	50	64.516	ENSORLG00015013815	ncl	85	64.952	Oryzias_latipes_hsok
ENSACAG00000001006	-	58	35.797	ENSORLG00015006613	-	79	38.596	Oryzias_latipes_hsok
ENSACAG00000001006	-	54	35.821	ENSOMEG00000015864	-	81	36.340	Oryzias_melastigma
ENSACAG00000001006	-	52	61.558	ENSPKIG00000002604	ncl	53	61.818	Paramormyrops_kingsleyae
ENSACAG00000001006	-	81	63.500	ENSPSIG00000002361	-	82	63.333	Pelodiscus_sinensis
ENSACAG00000001006	-	52	61.842	ENSPMGG00000004709	ncl	79	64.423	Periophthalmus_magnuspinnatus
ENSACAG00000001006	-	52	66.324	ENSPCIG00000003293	-	85	57.211	Phascolarctos_cinereus
ENSACAG00000001006	-	52	61.680	ENSPFOG00000024205	ncl	50	63.517	Poecilia_formosa
ENSACAG00000001006	-	52	61.417	ENSPLAG00000024026	ncl	50	62.730	Poecilia_latipinna
ENSACAG00000001006	-	52	61.680	ENSPMEG00000006000	ncl	50	62.992	Poecilia_mexicana
ENSACAG00000001006	-	52	62.632	ENSPNYG00000020494	ncl	83	50.889	Pundamilia_nyererei
ENSACAG00000001006	-	52	60.367	ENSSHAG00000002702	-	89	53.512	Sarcophilus_harrisii
ENSACAG00000001006	-	57	60.839	ENSSHAG00000007489	-	92	54.635	Sarcophilus_harrisii
ENSACAG00000001006	-	52	64.508	ENSSFOG00015008583	ncl	58	64.935	Scleropages_formosus
ENSACAG00000001006	-	55	41.096	ENSSFOG00015013153	-	84	43.831	Scleropages_formosus
ENSACAG00000001006	-	53	40.806	ENSSMAG00000007582	-	58	42.382	Scophthalmus_maximus
ENSACAG00000001006	-	52	63.708	ENSSDUG00000006128	ncl	85	63.802	Seriola_dumerili
ENSACAG00000001006	-	50	41.270	ENSSDUG00000010922	-	67	41.444	Seriola_dumerili
ENSACAG00000001006	-	52	63.708	ENSSLDG00000002012	ncl	53	64.062	Seriola_lalandi_dorsalis
ENSACAG00000001006	-	55	40.048	ENSSLDG00000015784	-	68	40.299	Seriola_lalandi_dorsalis
ENSACAG00000001006	-	67	51.667	ENSSARG00000010007	-	66	51.657	Sorex_araneus
ENSACAG00000001006	-	74	63.718	ENSSPUG00000008244	-	85	62.704	Sphenodon_punctatus
ENSACAG00000001006	-	54	41.872	ENSSPAG00000001859	-	64	40.102	Stegastes_partitus
ENSACAG00000001006	-	53	69.430	ENSTGUG00000009782	-	90	63.390	Taeniopygia_guttata
ENSACAG00000001006	-	50	60.163	ENSTRUG00000008185	ncl	56	59.184	Takifugu_rubripes
ENSACAG00000001006	-	50	60.656	ENSTNIG00000012186	ncl	62	59.896	Tetraodon_nigroviridis
ENSACAG00000001006	-	52	65.803	ENSXETG00000009517	ncl	54	66.321	Xenopus_tropicalis
ENSACAG00000001006	-	54	34.158	ENSXCOG00000007369	-	91	34.783	Xiphophorus_couchianus
ENSACAG00000001006	-	52	43.750	ENSXCOG00000003524	ncl	87	51.181	Xiphophorus_couchianus
ENSACAG00000001006	-	52	63.947	ENSXMAG00000005914	ncl	51	64.042	Xiphophorus_maculatus