EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000001142 (Gene tree)
Gene ID: 100558254
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 28640 bases
Position: chr1:220109561-220138200
Accession: 100558254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000001075	SpoU_methylase	PF00588.19	5.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000001104	TARBP1-201	4924	XM_008124169	ENSACAP00000001075	1586 (aa)	XP_008122376	G1K946

Gene Model

Click here to download ENSACAG00000001142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000001142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000001142	TARBP1	99	58.282	ENSG00000059588	TARBP1	99	58.733	Homo_sapiens
ENSACAG00000001142	TARBP1	86	43.090	ENSAPOG00000016419	si:dkey-85a20.4	84	43.282	Acanthochromis_polyacanthus
ENSACAG00000001142	TARBP1	85	60.555	ENSAMEG00000003359	TARBP1	99	60.555	Ailuropoda_melanoleuca
ENSACAG00000001142	TARBP1	93	41.492	ENSATEG00000020266	si:dkey-85a20.4	83	43.273	Anabas_testudineus
ENSACAG00000001142	TARBP1	84	65.262	ENSAPLG00000007666	TARBP1	98	66.641	Anas_platyrhynchos
ENSACAG00000001142	TARBP1	87	60.981	ENSANAG00000022031	TARBP1	99	57.214	Aotus_nancymaae
ENSACAG00000001142	TARBP1	91	65.244	ENSBTAG00000004517	TARBP1	98	65.708	Bos_taurus
ENSACAG00000001142	TARBP1	99	58.813	ENSCJAG00000018155	TARBP1	99	58.629	Callithrix_jacchus
ENSACAG00000001142	TARBP1	89	60.042	ENSCAFG00000011533	TARBP1	99	60.042	Canis_familiaris
ENSACAG00000001142	TARBP1	88	60.351	ENSCAFG00020027141	TARBP1	99	57.413	Canis_lupus_dingo
ENSACAG00000001142	TARBP1	98	57.512	ENSCHIG00000011437	TARBP1	98	58.184	Capra_hircus
ENSACAG00000001142	TARBP1	82	61.861	ENSTSYG00000010382	TARBP1	97	61.861	Carlito_syrichta
ENSACAG00000001142	TARBP1	79	53.555	ENSCAPG00000010831	TARBP1	98	53.597	Cavia_aperea
ENSACAG00000001142	TARBP1	98	55.562	ENSCPOG00000013995	TARBP1	98	56.226	Cavia_porcellus
ENSACAG00000001142	TARBP1	99	58.145	ENSCCAG00000037278	TARBP1	99	58.328	Cebus_capucinus
ENSACAG00000001142	TARBP1	99	58.072	ENSCATG00000011754	TARBP1	99	58.636	Cercocebus_atys
ENSACAG00000001142	TARBP1	81	59.537	ENSCLAG00000003655	TARBP1	95	59.768	Chinchilla_lanigera
ENSACAG00000001142	TARBP1	80	63.219	ENSCSAG00000010100	TARBP1	99	63.219	Chlorocebus_sabaeus
ENSACAG00000001142	TARBP1	94	63.678	ENSCPBG00000005587	TARBP1	97	66.022	Chrysemys_picta_bellii
ENSACAG00000001142	TARBP1	84	63.522	ENSCANG00000034343	TARBP1	98	63.596	Colobus_angolensis_palliatus
ENSACAG00000001142	TARBP1	98	55.380	ENSCGRG00001016690	Tarbp1	98	54.747	Cricetulus_griseus_chok1gshd
ENSACAG00000001142	TARBP1	88	58.092	ENSCGRG00000016893	Tarbp1	91	59.067	Cricetulus_griseus_crigri
ENSACAG00000001142	TARBP1	86	39.754	ENSCSEG00000005255	si:dkey-85a20.4	84	42.494	Cynoglossus_semilaevis
ENSACAG00000001142	TARBP1	86	43.939	ENSDARG00000079055	si:dkey-85a20.4	98	51.123	Danio_rerio
ENSACAG00000001142	TARBP1	99	56.509	ENSDNOG00000008637	TARBP1	99	57.177	Dasypus_novemcinctus
ENSACAG00000001142	TARBP1	81	57.814	ENSDORG00000007984	Tarbp1	99	57.891	Dipodomys_ordii
ENSACAG00000001142	TARBP1	99	58.415	ENSEASG00005000252	TARBP1	99	58.885	Equus_asinus_asinus
ENSACAG00000001142	TARBP1	99	59.252	ENSECAG00000023673	TARBP1	99	64.000	Equus_caballus
ENSACAG00000001142	TARBP1	99	40.086	ENSELUG00000012193	si:dkey-85a20.4	85	43.043	Esox_lucius
ENSACAG00000001142	TARBP1	88	58.216	ENSFCAG00000014183	TARBP1	99	55.305	Felis_catus
ENSACAG00000001142	TARBP1	81	65.549	ENSFALG00000013565	TARBP1	98	65.197	Ficedula_albicollis
ENSACAG00000001142	TARBP1	79	58.430	ENSFDAG00000001308	TARBP1	98	58.755	Fukomys_damarensis
ENSACAG00000001142	TARBP1	91	48.148	ENSFHEG00000007565	si:dkey-85a20.4	96	48.148	Fundulus_heteroclitus
ENSACAG00000001142	TARBP1	86	39.586	ENSGMOG00000004549	si:dkey-85a20.4	98	39.752	Gadus_morhua
ENSACAG00000001142	TARBP1	99	57.872	ENSGALG00000011000	TARBP1	99	58.867	Gallus_gallus
ENSACAG00000001142	TARBP1	86	43.977	ENSGAFG00000007387	si:dkey-85a20.4	83	44.380	Gambusia_affinis
ENSACAG00000001142	TARBP1	86	42.736	ENSGACG00000005865	si:dkey-85a20.4	97	42.909	Gasterosteus_aculeatus
ENSACAG00000001142	TARBP1	98	63.676	ENSGAGG00000012102	TARBP1	99	63.927	Gopherus_agassizii
ENSACAG00000001142	TARBP1	85	61.248	ENSGGOG00000022879	TARBP1	99	61.321	Gorilla_gorilla
ENSACAG00000001142	TARBP1	86	42.928	ENSHBUG00000008877	si:dkey-85a20.4	83	43.627	Haplochromis_burtoni
ENSACAG00000001142	TARBP1	98	56.238	ENSHGLG00000011592	TARBP1	98	56.694	Heterocephalus_glaber_female
ENSACAG00000001142	TARBP1	86	59.508	ENSHGLG00100015169	TARBP1	93	59.823	Heterocephalus_glaber_male
ENSACAG00000001142	TARBP1	99	39.290	ENSIPUG00000005249	si:dkey-85a20.4	81	43.068	Ictalurus_punctatus
ENSACAG00000001142	TARBP1	83	58.227	ENSSTOG00000032291	TARBP1	95	58.346	Ictidomys_tridecemlineatus
ENSACAG00000001142	TARBP1	85	55.792	ENSJJAG00000017840	Tarbp1	93	55.865	Jaculus_jaculus
ENSACAG00000001142	TARBP1	80	45.960	ENSKMAG00000017546	si:dkey-85a20.4	86	45.960	Kryptolebias_marmoratus
ENSACAG00000001142	TARBP1	64	46.780	ENSLBEG00000012132	si:dkey-85a20.4	72	46.780	Labrus_bergylta
ENSACAG00000001142	TARBP1	98	47.333	ENSLACG00000004337	TARBP1	99	47.502	Latimeria_chalumnae
ENSACAG00000001142	TARBP1	93	46.861	ENSLOCG00000016214	si:dkey-85a20.4	83	49.299	Lepisosteus_oculatus
ENSACAG00000001142	TARBP1	86	61.283	ENSLAFG00000011394	TARBP1	97	58.801	Loxodonta_africana
ENSACAG00000001142	TARBP1	99	57.187	ENSMFAG00000041068	TARBP1	99	57.604	Macaca_fascicularis
ENSACAG00000001142	TARBP1	99	56.514	ENSMMUG00000021703	TARBP1	99	56.924	Macaca_mulatta
ENSACAG00000001142	TARBP1	99	58.088	ENSMNEG00000045002	TARBP1	99	58.502	Macaca_nemestrina
ENSACAG00000001142	TARBP1	84	62.712	ENSMLEG00000044182	TARBP1	99	62.712	Mandrillus_leucophaeus
ENSACAG00000001142	TARBP1	92	41.723	ENSMAMG00000021760	si:dkey-85a20.4	84	43.057	Mastacembelus_armatus
ENSACAG00000001142	TARBP1	86	42.857	ENSMZEG00005005751	si:dkey-85a20.4	83	43.554	Maylandia_zebra
ENSACAG00000001142	TARBP1	98	54.706	ENSMAUG00000020968	Tarbp1	98	54.011	Mesocricetus_auratus
ENSACAG00000001142	TARBP1	99	52.963	ENSMICG00000015280	TARBP1	97	54.000	Microcebus_murinus
ENSACAG00000001142	TARBP1	98	54.930	ENSMOCG00000004128	Tarbp1	98	54.488	Microtus_ochrogaster
ENSACAG00000001142	TARBP1	99	39.032	ENSMMOG00000007795	si:dkey-85a20.4	100	39.032	Mola_mola
ENSACAG00000001142	TARBP1	98	58.262	ENSMODG00000008504	TARBP1	99	58.379	Monodelphis_domestica
ENSACAG00000001142	TARBP1	86	42.277	ENSMALG00000002916	si:dkey-85a20.4	84	43.309	Monopterus_albus
ENSACAG00000001142	TARBP1	98	54.224	MGP_CAROLIEiJ_G0031729	Tarbp1	98	53.943	Mus_caroli
ENSACAG00000001142	TARBP1	98	54.167	ENSMUSG00000090290	Tarbp1	98	53.890	Mus_musculus
ENSACAG00000001142	TARBP1	98	54.437	MGP_PahariEiJ_G0023326	Tarbp1	98	54.098	Mus_pahari
ENSACAG00000001142	TARBP1	98	54.293	MGP_SPRETEiJ_G0032846	Tarbp1	98	54.016	Mus_spretus
ENSACAG00000001142	TARBP1	77	60.792	ENSMPUG00000002802	TARBP1	99	60.792	Mustela_putorius_furo
ENSACAG00000001142	TARBP1	84	58.019	ENSMLUG00000002414	TARBP1	98	58.315	Myotis_lucifugus
ENSACAG00000001142	TARBP1	99	58.175	ENSNLEG00000002518	TARBP1	99	58.543	Nomascus_leucogenys
ENSACAG00000001142	TARBP1	66	65.556	ENSMEUG00000011370	-	66	65.556	Notamacropus_eugenii
ENSACAG00000001142	TARBP1	72	65.058	ENSOPRG00000013822	TARBP1	68	65.058	Ochotona_princeps
ENSACAG00000001142	TARBP1	98	56.020	ENSODEG00000005238	TARBP1	99	56.258	Octodon_degus
ENSACAG00000001142	TARBP1	86	42.786	ENSONIG00000009789	si:dkey-85a20.4	98	43.084	Oreochromis_niloticus
ENSACAG00000001142	TARBP1	98	57.866	ENSOCUG00000017418	TARBP1	98	59.080	Oryctolagus_cuniculus
ENSACAG00000001142	TARBP1	86	41.940	ENSORLG00000010529	si:dkey-85a20.4	84	42.372	Oryzias_latipes
ENSACAG00000001142	TARBP1	86	41.910	ENSORLG00020019264	si:dkey-85a20.4	84	42.341	Oryzias_latipes_hni
ENSACAG00000001142	TARBP1	86	41.786	ENSORLG00015003276	si:dkey-85a20.4	84	42.216	Oryzias_latipes_hsok
ENSACAG00000001142	TARBP1	98	55.983	ENSOGAG00000002379	TARBP1	98	56.716	Otolemur_garnettii
ENSACAG00000001142	TARBP1	88	61.111	ENSOARG00000003434	TARBP1	95	60.972	Ovis_aries
ENSACAG00000001142	TARBP1	85	63.104	ENSPPAG00000028097	TARBP1	99	63.177	Pan_paniscus
ENSACAG00000001142	TARBP1	99	54.517	ENSPPRG00000013561	TARBP1	99	55.037	Panthera_pardus
ENSACAG00000001142	TARBP1	84	61.070	ENSPTIG00000009281	TARBP1	99	61.070	Panthera_tigris_altaica
ENSACAG00000001142	TARBP1	99	58.333	ENSPTRG00000002124	TARBP1	99	58.748	Pan_troglodytes
ENSACAG00000001142	TARBP1	99	58.272	ENSPANG00000021933	TARBP1	99	58.686	Papio_anubis
ENSACAG00000001142	TARBP1	99	40.931	ENSPKIG00000016716	si:dkey-85a20.4	83	44.292	Paramormyrops_kingsleyae
ENSACAG00000001142	TARBP1	79	69.206	ENSPSIG00000010699	TARBP1	98	69.206	Pelodiscus_sinensis
ENSACAG00000001142	TARBP1	98	54.153	ENSPEMG00000006888	Tarbp1	98	54.071	Peromyscus_maniculatus_bairdii
ENSACAG00000001142	TARBP1	90	73.514	ENSPCIG00000029710	TARBP1	97	75.000	Phascolarctos_cinereus
ENSACAG00000001142	TARBP1	86	43.500	ENSPFOG00000013020	si:dkey-85a20.4	97	43.447	Poecilia_formosa
ENSACAG00000001142	TARBP1	99	40.453	ENSPLAG00000006044	si:dkey-85a20.4	84	43.768	Poecilia_latipinna
ENSACAG00000001142	TARBP1	99	40.330	ENSPMEG00000017857	si:dkey-85a20.4	99	39.828	Poecilia_mexicana
ENSACAG00000001142	TARBP1	99	40.342	ENSPREG00000022753	si:dkey-85a20.4	83	43.991	Poecilia_reticulata
ENSACAG00000001142	TARBP1	90	61.767	ENSPPYG00000000102	TARBP1	99	61.858	Pongo_abelii
ENSACAG00000001142	TARBP1	84	72.000	ENSPCAG00000004808	TARBP1	85	72.000	Procavia_capensis
ENSACAG00000001142	TARBP1	98	56.231	ENSPCOG00000005666	TARBP1	98	57.356	Propithecus_coquereli
ENSACAG00000001142	TARBP1	98	49.156	ENSPVAG00000014798	TARBP1	98	49.625	Pteropus_vampyrus
ENSACAG00000001142	TARBP1	86	42.653	ENSPNYG00000019135	si:dkey-85a20.4	83	43.348	Pundamilia_nyererei
ENSACAG00000001142	TARBP1	98	51.707	ENSRNOG00000053574	Tarbp1	98	51.707	Rattus_norvegicus
ENSACAG00000001142	TARBP1	88	58.257	ENSRBIG00000043362	TARBP1	96	57.887	Rhinopithecus_bieti
ENSACAG00000001142	TARBP1	98	58.979	ENSRROG00000029527	TARBP1	99	59.217	Rhinopithecus_roxellana
ENSACAG00000001142	TARBP1	84	62.592	ENSSBOG00000034503	TARBP1	96	62.592	Saimiri_boliviensis_boliviensis
ENSACAG00000001142	TARBP1	83	62.752	ENSSHAG00000000013	TARBP1	98	62.752	Sarcophilus_harrisii
ENSACAG00000001142	TARBP1	85	44.122	ENSSFOG00015002660	si:dkey-85a20.4	96	44.765	Scleropages_formosus
ENSACAG00000001142	TARBP1	93	41.677	ENSSMAG00000007081	si:dkey-85a20.4	82	43.933	Scophthalmus_maximus
ENSACAG00000001142	TARBP1	86	41.786	ENSSDUG00000023566	si:dkey-85a20.4	83	42.217	Seriola_dumerili
ENSACAG00000001142	TARBP1	86	42.654	ENSSLDG00000020200	si:dkey-85a20.4	84	43.222	Seriola_lalandi_dorsalis
ENSACAG00000001142	TARBP1	87	68.599	ENSSARG00000012207	TARBP1	88	68.599	Sorex_araneus
ENSACAG00000001142	TARBP1	98	64.218	ENSSPUG00000015364	TARBP1	99	64.093	Sphenodon_punctatus
ENSACAG00000001142	TARBP1	86	43.150	ENSSPAG00000007213	si:dkey-85a20.4	83	43.406	Stegastes_partitus
ENSACAG00000001142	TARBP1	98	58.958	ENSSSCG00000010160	TARBP1	98	61.830	Sus_scrofa
ENSACAG00000001142	TARBP1	81	65.635	ENSTGUG00000010214	TARBP1	99	65.635	Taeniopygia_guttata
ENSACAG00000001142	TARBP1	93	38.892	ENSTNIG00000016586	si:dkey-85a20.4	99	42.648	Tetraodon_nigroviridis
ENSACAG00000001142	TARBP1	82	59.153	ENSTTRG00000008707	TARBP1	95	59.101	Tursiops_truncatus
ENSACAG00000001142	TARBP1	82	60.380	ENSUMAG00000006730	TARBP1	98	60.380	Ursus_maritimus
ENSACAG00000001142	TARBP1	72	66.667	ENSVPAG00000007665	TARBP1	80	66.667	Vicugna_pacos
ENSACAG00000001142	TARBP1	86	61.083	ENSVVUG00000007460	TARBP1	99	62.238	Vulpes_vulpes
ENSACAG00000001142	TARBP1	84	52.254	ENSXETG00000016224	tarbp1	98	52.254	Xenopus_tropicalis
ENSACAG00000001142	TARBP1	80	47.586	ENSXCOG00000011779	si:dkey-85a20.4	91	47.724	Xiphophorus_couchianus
ENSACAG00000001142	TARBP1	66	43.139	ENSXMAG00000009600	si:dkey-85a20.4	100	43.233	Xiphophorus_maculatus