EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000001231 (Gene tree)
Gene ID: 100558771
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 372 bases
Position: chrGL343610.1:333467-333838
Accession: 100558771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000001122	LSM	PF01423.22	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000001154	LSM10-201	372	XM_008121845	ENSACAP00000001122	123 (aa)	XP_008120052	H9G4T7

Gene Model

Click here to download ENSACAG00000001231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000001231's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000001231	LSM10	83	33.333	ENSACAG00000017281	LSM2	86	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000001231	LSM10	95	70.085	ENSG00000181817	LSM10	95	70.085	Homo_sapiens
ENSACAG00000001231	LSM10	100	67.480	ENSAMEG00000019854	LSM10	100	67.480	Ailuropoda_melanoleuca
ENSACAG00000001231	LSM10	92	61.947	ENSACIG00000015420	oscp1a	75	61.947	Amphilophus_citrinellus
ENSACAG00000001231	LSM10	93	60.000	ENSAOCG00000015618	LSM10	95	60.000	Amphiprion_ocellaris
ENSACAG00000001231	LSM10	93	57.895	ENSAOCG00000015607	LSM10	88	57.895	Amphiprion_ocellaris
ENSACAG00000001231	LSM10	93	60.000	ENSAOCG00000014654	-	95	60.000	Amphiprion_ocellaris
ENSACAG00000001231	LSM10	93	57.895	ENSAPEG00000021851	LSM10	88	57.895	Amphiprion_percula
ENSACAG00000001231	LSM10	93	60.000	ENSAPEG00000021845	-	95	60.000	Amphiprion_percula
ENSACAG00000001231	LSM10	94	56.897	ENSATEG00000006310	oscp1a	86	56.897	Anabas_testudineus
ENSACAG00000001231	LSM10	95	68.376	ENSANAG00000031489	-	96	68.376	Aotus_nancymaae
ENSACAG00000001231	LSM10	100	67.480	ENSANAG00000018759	-	100	67.480	Aotus_nancymaae
ENSACAG00000001231	LSM10	93	60.000	ENSACLG00000004728	oscp1a	93	60.000	Astatotilapia_calliptera
ENSACAG00000001231	LSM10	96	61.864	ENSAMXG00000025301	oscp1a	98	61.864	Astyanax_mexicanus
ENSACAG00000001231	LSM10	95	70.085	ENSBTAG00000024096	LSM10	96	70.085	Bos_taurus
ENSACAG00000001231	LSM10	76	32.979	WBGene00010619	K07A1.15	74	32.979	Caenorhabditis_elegans
ENSACAG00000001231	LSM10	100	66.667	ENSCJAG00000044880	LSM10	100	66.667	Callithrix_jacchus
ENSACAG00000001231	LSM10	100	67.480	ENSCAFG00000003382	LSM10	100	67.480	Canis_familiaris
ENSACAG00000001231	LSM10	100	67.480	ENSCAFG00020008920	LSM10	100	67.480	Canis_lupus_dingo
ENSACAG00000001231	LSM10	95	70.085	ENSCHIG00000009398	LSM10	96	70.085	Capra_hircus
ENSACAG00000001231	LSM10	100	66.667	ENSCAPG00000012567	LSM10	100	66.667	Cavia_aperea
ENSACAG00000001231	LSM10	100	66.667	ENSCPOG00000039302	LSM10	100	66.667	Cavia_porcellus
ENSACAG00000001231	LSM10	95	66.667	ENSCCAG00000008378	-	95	66.667	Cebus_capucinus
ENSACAG00000001231	LSM10	100	67.480	ENSCCAG00000018913	-	100	67.480	Cebus_capucinus
ENSACAG00000001231	LSM10	95	69.231	ENSCATG00000006589	LSM10	95	69.231	Cercocebus_atys
ENSACAG00000001231	LSM10	100	67.480	ENSCLAG00000008633	LSM10	100	67.480	Chinchilla_lanigera
ENSACAG00000001231	LSM10	95	69.231	ENSCSAG00000000134	LSM10	95	69.231	Chlorocebus_sabaeus
ENSACAG00000001231	LSM10	100	66.400	ENSCHOG00000008615	LSM10	100	66.400	Choloepus_hoffmanni
ENSACAG00000001231	LSM10	92	32.743	ENSCSAVG00000001896	-	97	32.743	Ciona_savignyi
ENSACAG00000001231	LSM10	95	69.231	ENSCANG00000019928	LSM10	95	69.231	Colobus_angolensis_palliatus
ENSACAG00000001231	LSM10	98	67.769	ENSCGRG00001004317	-	99	67.769	Cricetulus_griseus_chok1gshd
ENSACAG00000001231	LSM10	93	58.974	ENSCGRG00001022673	-	94	58.974	Cricetulus_griseus_chok1gshd
ENSACAG00000001231	LSM10	98	67.769	ENSCGRG00000014935	-	99	67.769	Cricetulus_griseus_crigri
ENSACAG00000001231	LSM10	93	58.974	ENSCGRG00000015514	-	94	58.974	Cricetulus_griseus_crigri
ENSACAG00000001231	LSM10	98	55.833	ENSCSEG00000010374	oscp1a	81	55.833	Cynoglossus_semilaevis
ENSACAG00000001231	LSM10	93	57.391	ENSCVAG00000001536	oscp1a	87	57.391	Cyprinodon_variegatus
ENSACAG00000001231	LSM10	69	64.706	ENSDARG00000109563	CABZ01074453.1	99	64.706	Danio_rerio
ENSACAG00000001231	LSM10	98	61.983	ENSDARG00000101222	oscp1a	100	61.983	Danio_rerio
ENSACAG00000001231	LSM10	95	70.940	ENSDNOG00000036662	LSM10	95	70.940	Dasypus_novemcinctus
ENSACAG00000001231	LSM10	100	67.480	ENSDORG00000007579	Lsm10	100	67.480	Dipodomys_ordii
ENSACAG00000001231	LSM10	100	67.480	ENSETEG00000005703	LSM10	100	67.480	Echinops_telfairi
ENSACAG00000001231	LSM10	93	58.772	ENSEBUG00000001312	oscp1a	93	58.772	Eptatretus_burgeri
ENSACAG00000001231	LSM10	100	68.293	ENSEASG00005012194	LSM10	100	68.293	Equus_asinus_asinus
ENSACAG00000001231	LSM10	100	68.293	ENSECAG00000005071	LSM10	100	68.293	Equus_caballus
ENSACAG00000001231	LSM10	100	66.667	ENSEEUG00000012032	LSM10	100	66.667	Erinaceus_europaeus
ENSACAG00000001231	LSM10	99	62.295	ENSELUG00000007452	oscp1a	100	62.295	Esox_lucius
ENSACAG00000001231	LSM10	100	75.610	ENSFALG00000000851	LSM10	100	75.610	Ficedula_albicollis
ENSACAG00000001231	LSM10	100	67.480	ENSFDAG00000021056	LSM10	100	67.480	Fukomys_damarensis
ENSACAG00000001231	LSM10	88	61.468	ENSFHEG00000001058	oscp1a	94	61.468	Fundulus_heteroclitus
ENSACAG00000001231	LSM10	93	60.870	ENSGMOG00000019832	oscp1a	96	60.870	Gadus_morhua
ENSACAG00000001231	LSM10	100	73.171	ENSGALG00000002127	LSM10	100	73.171	Gallus_gallus
ENSACAG00000001231	LSM10	98	53.226	ENSGAFG00000016445	oscp1a	99	53.226	Gambusia_affinis
ENSACAG00000001231	LSM10	94	56.897	ENSGACG00000002329	oscp1a	95	56.897	Gasterosteus_aculeatus
ENSACAG00000001231	LSM10	100	73.171	ENSGAGG00000024848	LSM10	100	73.171	Gopherus_agassizii
ENSACAG00000001231	LSM10	100	67.480	ENSGGOG00000003556	LSM10	100	67.480	Gorilla_gorilla
ENSACAG00000001231	LSM10	93	60.000	ENSHBUG00000001722	oscp1a	93	60.000	Haplochromis_burtoni
ENSACAG00000001231	LSM10	100	66.667	ENSHGLG00000011625	LSM10	100	66.667	Heterocephalus_glaber_female
ENSACAG00000001231	LSM10	100	66.667	ENSHGLG00100001769	LSM10	100	66.667	Heterocephalus_glaber_male
ENSACAG00000001231	LSM10	85	63.810	ENSIPUG00000005808	oscp1a	91	63.810	Ictalurus_punctatus
ENSACAG00000001231	LSM10	100	67.480	ENSSTOG00000000606	LSM10	100	67.480	Ictidomys_tridecemlineatus
ENSACAG00000001231	LSM10	93	59.130	ENSKMAG00000012143	oscp1a	95	59.130	Kryptolebias_marmoratus
ENSACAG00000001231	LSM10	95	57.265	ENSLBEG00000017764	oscp1a	96	57.265	Labrus_bergylta
ENSACAG00000001231	LSM10	100	61.789	ENSLACG00000015904	LSM10	95	61.789	Latimeria_chalumnae
ENSACAG00000001231	LSM10	98	61.667	ENSLOCG00000018277	oscp1a	98	61.667	Lepisosteus_oculatus
ENSACAG00000001231	LSM10	100	65.854	ENSLAFG00000009600	LSM10	100	65.854	Loxodonta_africana
ENSACAG00000001231	LSM10	95	69.231	ENSMFAG00000009115	LSM10	95	69.231	Macaca_fascicularis
ENSACAG00000001231	LSM10	95	69.231	ENSMMUG00000017338	LSM10	95	69.231	Macaca_mulatta
ENSACAG00000001231	LSM10	95	69.231	ENSMNEG00000020023	LSM10	95	69.231	Macaca_nemestrina
ENSACAG00000001231	LSM10	95	69.231	ENSMLEG00000025150	LSM10	95	69.231	Mandrillus_leucophaeus
ENSACAG00000001231	LSM10	95	59.829	ENSMAMG00000004427	oscp1a	96	59.829	Mastacembelus_armatus
ENSACAG00000001231	LSM10	93	60.000	ENSMZEG00005026307	oscp1a	93	60.000	Maylandia_zebra
ENSACAG00000001231	LSM10	100	73.171	ENSMGAG00000015707	LSM10	100	73.171	Meleagris_gallopavo
ENSACAG00000001231	LSM10	95	70.940	ENSMAUG00000016624	Lsm10	96	70.940	Mesocricetus_auratus
ENSACAG00000001231	LSM10	95	69.231	ENSMOCG00000021943	Lsm10	96	69.231	Microtus_ochrogaster
ENSACAG00000001231	LSM10	93	60.870	ENSMMOG00000013597	oscp1a	86	60.870	Mola_mola
ENSACAG00000001231	LSM10	100	69.919	ENSMODG00000023328	LSM10	100	69.919	Monodelphis_domestica
ENSACAG00000001231	LSM10	95	69.231	MGP_CAROLIEiJ_G0026467	Lsm10	99	70.652	Mus_caroli
ENSACAG00000001231	LSM10	95	69.231	ENSMUSG00000050188	Lsm10	99	70.652	Mus_musculus
ENSACAG00000001231	LSM10	95	69.231	MGP_PahariEiJ_G0028798	Lsm10	99	70.652	Mus_pahari
ENSACAG00000001231	LSM10	95	69.231	MGP_SPRETEiJ_G0027446	Lsm10	99	70.652	Mus_spretus
ENSACAG00000001231	LSM10	100	67.480	ENSMPUG00000018593	LSM10	100	67.480	Mustela_putorius_furo
ENSACAG00000001231	LSM10	100	65.854	ENSMLUG00000023895	LSM10	100	65.854	Myotis_lucifugus
ENSACAG00000001231	LSM10	100	65.854	ENSNGAG00000015011	Lsm10	100	65.854	Nannospalax_galili
ENSACAG00000001231	LSM10	94	60.345	ENSNBRG00000014306	oscp1a	94	60.345	Neolamprologus_brichardi
ENSACAG00000001231	LSM10	100	67.480	ENSNLEG00000033754	LSM10	100	67.480	Nomascus_leucogenys
ENSACAG00000001231	LSM10	100	69.919	ENSMEUG00000006313	LSM10	100	69.919	Notamacropus_eugenii
ENSACAG00000001231	LSM10	100	68.293	ENSOPRG00000001699	LSM10	100	68.293	Ochotona_princeps
ENSACAG00000001231	LSM10	100	67.480	ENSODEG00000019161	LSM10	100	67.480	Octodon_degus
ENSACAG00000001231	LSM10	95	60.684	ENSONIG00000020904	oscp1a	96	60.684	Oreochromis_niloticus
ENSACAG00000001231	LSM10	100	73.984	ENSOANG00000002066	LSM10	100	73.984	Ornithorhynchus_anatinus
ENSACAG00000001231	LSM10	100	68.293	ENSOCUG00000005333	LSM10	100	68.293	Oryctolagus_cuniculus
ENSACAG00000001231	LSM10	93	63.478	ENSORLG00000009504	oscp1a	95	63.478	Oryzias_latipes
ENSACAG00000001231	LSM10	93	63.478	ENSORLG00020016201	oscp1a	95	63.478	Oryzias_latipes_hni
ENSACAG00000001231	LSM10	93	62.609	ENSORLG00015007794	oscp1a	95	62.609	Oryzias_latipes_hsok
ENSACAG00000001231	LSM10	100	68.293	ENSOGAG00000002653	LSM10	100	68.293	Otolemur_garnettii
ENSACAG00000001231	LSM10	95	70.085	ENSOARG00000009596	LSM10	96	70.085	Ovis_aries
ENSACAG00000001231	LSM10	95	70.085	ENSPPAG00000023465	LSM10	95	70.085	Pan_paniscus
ENSACAG00000001231	LSM10	100	68.293	ENSPPRG00000014619	LSM10	100	68.293	Panthera_pardus
ENSACAG00000001231	LSM10	100	68.293	ENSPTIG00000004613	LSM10	100	68.293	Panthera_tigris_altaica
ENSACAG00000001231	LSM10	95	70.085	ENSPTRG00000000539	LSM10	95	70.085	Pan_troglodytes
ENSACAG00000001231	LSM10	95	69.231	ENSPANG00000023172	LSM10	95	69.231	Papio_anubis
ENSACAG00000001231	LSM10	95	62.393	ENSPKIG00000003728	oscp1a	94	62.393	Paramormyrops_kingsleyae
ENSACAG00000001231	LSM10	100	74.797	ENSPSIG00000000590	LSM10	100	74.797	Pelodiscus_sinensis
ENSACAG00000001231	LSM10	63	63.636	ENSPMGG00000015718	oscp1a	100	63.636	Periophthalmus_magnuspinnatus
ENSACAG00000001231	LSM10	91	67.857	ENSPCIG00000014865	LSM10	82	67.857	Phascolarctos_cinereus
ENSACAG00000001231	LSM10	95	59.829	ENSPFOG00000020490	oscp1a	99	59.829	Poecilia_formosa
ENSACAG00000001231	LSM10	95	59.829	ENSPLAG00000016537	oscp1a	89	59.829	Poecilia_latipinna
ENSACAG00000001231	LSM10	89	62.385	ENSPMEG00000000174	oscp1a	95	62.385	Poecilia_mexicana
ENSACAG00000001231	LSM10	95	58.120	ENSPREG00000009899	oscp1a	89	58.120	Poecilia_reticulata
ENSACAG00000001231	LSM10	100	67.480	ENSPPYG00000001539	LSM10	100	67.480	Pongo_abelii
ENSACAG00000001231	LSM10	95	68.376	ENSPCAG00000002520	LSM10	96	68.376	Procavia_capensis
ENSACAG00000001231	LSM10	100	65.854	ENSPVAG00000008644	LSM10	100	65.854	Pteropus_vampyrus
ENSACAG00000001231	LSM10	93	60.000	ENSPNYG00000003138	oscp1a	93	60.000	Pundamilia_nyererei
ENSACAG00000001231	LSM10	95	58.974	ENSPNAG00000028829	oscp1a	97	58.974	Pygocentrus_nattereri
ENSACAG00000001231	LSM10	95	68.376	ENSRNOG00000025716	Lsm10	96	68.376	Rattus_norvegicus
ENSACAG00000001231	LSM10	95	69.231	ENSRBIG00000001561	LSM10	95	69.231	Rhinopithecus_bieti
ENSACAG00000001231	LSM10	95	69.231	ENSRROG00000011414	LSM10	95	69.231	Rhinopithecus_roxellana
ENSACAG00000001231	LSM10	100	67.480	ENSSBOG00000036413	-	100	67.480	Saimiri_boliviensis_boliviensis
ENSACAG00000001231	LSM10	100	70.732	ENSSHAG00000018056	LSM10	100	70.732	Sarcophilus_harrisii
ENSACAG00000001231	LSM10	99	61.475	ENSSFOG00015019954	lsm10	100	61.475	Scleropages_formosus
ENSACAG00000001231	LSM10	91	58.929	ENSSMAG00000001297	oscp1a	96	58.929	Scophthalmus_maximus
ENSACAG00000001231	LSM10	100	57.258	ENSSDUG00000007090	oscp1a	100	57.258	Seriola_dumerili
ENSACAG00000001231	LSM10	97	57.983	ENSSLDG00000000800	oscp1a	98	57.983	Seriola_lalandi_dorsalis
ENSACAG00000001231	LSM10	87	71.028	ENSSARG00000004211	LSM10	100	68.000	Sorex_araneus
ENSACAG00000001231	LSM10	92	58.407	ENSSPAG00000009229	oscp1a	93	58.407	Stegastes_partitus
ENSACAG00000001231	LSM10	100	66.667	ENSSSCG00000038916	LSM10	100	66.667	Sus_scrofa
ENSACAG00000001231	LSM10	99	74.590	ENSTGUG00000001602	-	100	74.590	Taeniopygia_guttata
ENSACAG00000001231	LSM10	99	74.590	ENSTGUG00000001600	-	100	74.590	Taeniopygia_guttata
ENSACAG00000001231	LSM10	99	59.016	ENSTRUG00000010531	oscp1a	98	59.016	Takifugu_rubripes
ENSACAG00000001231	LSM10	100	65.854	ENSTBEG00000016674	LSM10	100	65.854	Tupaia_belangeri
ENSACAG00000001231	LSM10	100	67.480	ENSUAMG00000020265	LSM10	100	67.480	Ursus_americanus
ENSACAG00000001231	LSM10	100	67.480	ENSUMAG00000001438	LSM10	57	67.480	Ursus_maritimus
ENSACAG00000001231	LSM10	100	67.480	ENSVVUG00000023209	LSM10	100	67.480	Vulpes_vulpes
ENSACAG00000001231	LSM10	100	65.854	ENSXETG00000027631	lsm10	100	65.854	Xenopus_tropicalis
ENSACAG00000001231	LSM10	94	59.483	ENSXCOG00000018776	oscp1a	73	59.483	Xiphophorus_couchianus
ENSACAG00000001231	LSM10	92	60.177	ENSXMAG00000019963	oscp1a	90	60.177	Xiphophorus_maculatus