EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000001418 (Gene tree)
Gene ID: 100562941
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 83974 bases
Position: chr3:186821149-186905122
Accession: 100562941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000001567	TUDOR	PF00567.24	4.7e-97	1	5
ENSACAP00000001567	TUDOR	PF00567.24	4.7e-97	2	5
ENSACAP00000001567	TUDOR	PF00567.24	4.7e-97	3	5
ENSACAP00000001567	TUDOR	PF00567.24	4.7e-97	4	5
ENSACAP00000001567	TUDOR	PF00567.24	4.7e-97	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000001604	RNF17-201	5420	XM_008107968	ENSACAP00000001567	1589 (aa)	XP_008106175	G1K9Q0

Gene Model

Click here to download ENSACAG00000001418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000001418's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000001418	RNF17	58	30.357	ENSACAG00000010836	TDRD15	75	30.357

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000001418	RNF17	94	45.395	ENSG00000132972	RNF17	99	49.825	Homo_sapiens
ENSACAG00000001418	RNF17	83	34.137	ENSAPOG00000017034	rnf17	76	37.063	Acanthochromis_polyacanthus
ENSACAG00000001418	RNF17	94	47.090	ENSAMEG00000017340	RNF17	92	47.090	Ailuropoda_melanoleuca
ENSACAG00000001418	RNF17	93	33.597	ENSAOCG00000018283	rnf17	92	33.816	Amphiprion_ocellaris
ENSACAG00000001418	RNF17	75	35.803	ENSAPEG00000022338	rnf17	83	35.803	Amphiprion_percula
ENSACAG00000001418	RNF17	72	35.867	ENSATEG00000002067	rnf17	97	32.798	Anabas_testudineus
ENSACAG00000001418	RNF17	89	45.667	ENSAPLG00000003969	RNF17	99	45.667	Anas_platyrhynchos
ENSACAG00000001418	RNF17	84	51.628	ENSANAG00000029969	RNF17	89	51.628	Aotus_nancymaae
ENSACAG00000001418	RNF17	93	31.683	ENSACLG00000018279	rnf17	92	31.683	Astatotilapia_calliptera
ENSACAG00000001418	RNF17	75	35.655	ENSAMXG00000011002	rnf17	84	35.153	Astyanax_mexicanus
ENSACAG00000001418	RNF17	93	44.954	ENSCJAG00000018937	RNF17	99	48.000	Callithrix_jacchus
ENSACAG00000001418	RNF17	92	47.492	ENSCAFG00000007418	RNF17	92	47.228	Canis_familiaris
ENSACAG00000001418	RNF17	89	46.478	ENSCHIG00000026716	RNF17	99	47.788	Capra_hircus
ENSACAG00000001418	RNF17	94	46.401	ENSTSYG00000000365	RNF17	99	46.843	Carlito_syrichta
ENSACAG00000001418	RNF17	75	40.066	ENSCAPG00000012908	RNF17	90	40.066	Cavia_aperea
ENSACAG00000001418	RNF17	93	45.072	ENSCCAG00000026725	RNF17	99	47.865	Cebus_capucinus
ENSACAG00000001418	RNF17	93	45.449	ENSCATG00000040352	RNF17	99	48.230	Cercocebus_atys
ENSACAG00000001418	RNF17	93	46.256	ENSCLAG00000004127	RNF17	93	46.388	Chinchilla_lanigera
ENSACAG00000001418	RNF17	93	45.163	ENSCSAG00000018019	RNF17	92	44.967	Chlorocebus_sabaeus
ENSACAG00000001418	RNF17	78	49.535	ENSCHOG00000013310	RNF17	77	49.535	Choloepus_hoffmanni
ENSACAG00000001418	RNF17	94	51.767	ENSCPBG00000020920	RNF17	98	51.898	Chrysemys_picta_bellii
ENSACAG00000001418	RNF17	93	45.056	ENSCANG00000032927	RNF17	99	48.083	Colobus_angolensis_palliatus
ENSACAG00000001418	RNF17	92	47.032	ENSCGRG00001022658	Rnf17	91	47.032	Cricetulus_griseus_chok1gshd
ENSACAG00000001418	RNF17	92	47.032	ENSCGRG00000009924	Rnf17	91	47.032	Cricetulus_griseus_crigri
ENSACAG00000001418	RNF17	66	33.271	ENSCSEG00000008626	rnf17	75	33.333	Cynoglossus_semilaevis
ENSACAG00000001418	RNF17	70	36.182	ENSCVAG00000017008	rnf17	83	36.182	Cyprinodon_variegatus
ENSACAG00000001418	RNF17	94	46.610	ENSDNOG00000006115	RNF17	92	46.610	Dasypus_novemcinctus
ENSACAG00000001418	RNF17	99	45.296	ENSECAG00000017152	RNF17	98	45.493	Equus_caballus
ENSACAG00000001418	RNF17	73	46.246	ENSEEUG00000000332	RNF17	78	46.246	Erinaceus_europaeus
ENSACAG00000001418	RNF17	75	35.697	ENSELUG00000005626	rnf17	74	35.697	Esox_lucius
ENSACAG00000001418	RNF17	94	47.132	ENSFCAG00000004914	RNF17	99	47.493	Felis_catus
ENSACAG00000001418	RNF17	96	47.267	ENSFALG00000008766	RNF17	98	47.924	Ficedula_albicollis
ENSACAG00000001418	RNF17	93	46.275	ENSFDAG00000017857	RNF17	91	46.209	Fukomys_damarensis
ENSACAG00000001418	RNF17	93	31.579	ENSFHEG00000014822	rnf17	94	31.274	Fundulus_heteroclitus
ENSACAG00000001418	RNF17	62	34.221	ENSGMOG00000015560	-	100	34.221	Gadus_morhua
ENSACAG00000001418	RNF17	74	32.473	ENSGAFG00000004463	rnf17	89	32.535	Gambusia_affinis
ENSACAG00000001418	RNF17	94	49.347	ENSGAGG00000016999	RNF17	95	49.485	Gopherus_agassizii
ENSACAG00000001418	RNF17	94	45.526	ENSGGOG00000014491	RNF17	99	47.788	Gorilla_gorilla
ENSACAG00000001418	RNF17	77	34.283	ENSHBUG00000003554	rnf17	92	31.638	Haplochromis_burtoni
ENSACAG00000001418	RNF17	94	45.311	ENSHGLG00000007270	RNF17	92	45.443	Heterocephalus_glaber_female
ENSACAG00000001418	RNF17	94	45.246	ENSHGLG00100017393	RNF17	92	45.377	Heterocephalus_glaber_male
ENSACAG00000001418	RNF17	73	42.647	ENSHCOG00000017676	rnf17	79	42.647	Hippocampus_comes
ENSACAG00000001418	RNF17	75	34.963	ENSIPUG00000001087	rnf17	79	34.963	Ictalurus_punctatus
ENSACAG00000001418	RNF17	61	44.527	ENSSTOG00000011255	-	99	44.527	Ictidomys_tridecemlineatus
ENSACAG00000001418	RNF17	94	46.757	ENSJJAG00000016584	Rnf17	92	46.757	Jaculus_jaculus
ENSACAG00000001418	RNF17	76	33.971	ENSKMAG00000013403	rnf17	75	34.513	Kryptolebias_marmoratus
ENSACAG00000001418	RNF17	74	33.983	ENSLBEG00000014910	rnf17	73	34.732	Labrus_bergylta
ENSACAG00000001418	RNF17	85	42.496	ENSLACG00000000323	RNF17	99	42.411	Latimeria_chalumnae
ENSACAG00000001418	RNF17	75	32.435	ENSLOCG00000010768	rnf17	74	32.435	Lepisosteus_oculatus
ENSACAG00000001418	RNF17	93	45.425	ENSMFAG00000032388	RNF17	99	48.378	Macaca_fascicularis
ENSACAG00000001418	RNF17	93	45.869	ENSMMUG00000014610	RNF17	99	48.378	Macaca_mulatta
ENSACAG00000001418	RNF17	93	45.425	ENSMNEG00000011234	RNF17	99	48.378	Macaca_nemestrina
ENSACAG00000001418	RNF17	93	45.033	ENSMLEG00000030227	RNF17	92	44.837	Mandrillus_leucophaeus
ENSACAG00000001418	RNF17	75	34.028	ENSMAMG00000020403	rnf17	87	34.028	Mastacembelus_armatus
ENSACAG00000001418	RNF17	93	31.749	ENSMZEG00005019166	rnf17	92	31.749	Maylandia_zebra
ENSACAG00000001418	RNF17	77	46.593	ENSMGAG00000015138	RNF17	97	46.634	Meleagris_gallopavo
ENSACAG00000001418	RNF17	94	45.490	ENSMAUG00000004788	Rnf17	93	45.490	Mesocricetus_auratus
ENSACAG00000001418	RNF17	93	46.658	ENSMICG00000010364	RNF17	99	47.570	Microcebus_murinus
ENSACAG00000001418	RNF17	59	49.597	ENSMOCG00000011818	-	99	49.597	Microtus_ochrogaster
ENSACAG00000001418	RNF17	75	42.029	ENSMMOG00000019514	rnf17	82	42.029	Mola_mola
ENSACAG00000001418	RNF17	94	49.544	ENSMODG00000007827	RNF17	91	49.544	Monodelphis_domestica
ENSACAG00000001418	RNF17	69	34.319	ENSMALG00000016943	rnf17	75	34.319	Monopterus_albus
ENSACAG00000001418	RNF17	92	46.017	MGP_CAROLIEiJ_G0019337	Rnf17	91	46.017	Mus_caroli
ENSACAG00000001418	RNF17	92	45.982	ENSMUSG00000000365	Rnf17	91	45.982	Mus_musculus
ENSACAG00000001418	RNF17	92	46.403	MGP_PahariEiJ_G0030355	Rnf17	91	46.403	Mus_pahari
ENSACAG00000001418	RNF17	92	46.108	MGP_SPRETEiJ_G0020228	Rnf17	91	46.108	Mus_spretus
ENSACAG00000001418	RNF17	94	47.313	ENSMPUG00000013305	RNF17	92	47.313	Mustela_putorius_furo
ENSACAG00000001418	RNF17	93	45.782	ENSMLUG00000003903	RNF17	92	45.978	Myotis_lucifugus
ENSACAG00000001418	RNF17	92	46.332	ENSNGAG00000013553	Rnf17	91	46.332	Nannospalax_galili
ENSACAG00000001418	RNF17	75	33.694	ENSNBRG00000012006	rnf17	87	33.694	Neolamprologus_brichardi
ENSACAG00000001418	RNF17	93	44.859	ENSNLEG00000013780	RNF17	99	47.259	Nomascus_leucogenys
ENSACAG00000001418	RNF17	60	64.602	ENSMEUG00000003276	-	53	64.602	Notamacropus_eugenii
ENSACAG00000001418	RNF17	81	44.764	ENSOPRG00000016743	-	79	44.764	Ochotona_princeps
ENSACAG00000001418	RNF17	51	41.729	ENSODEG00000005443	-	99	41.729	Octodon_degus
ENSACAG00000001418	RNF17	77	34.390	ENSONIG00000015746	rnf17	99	34.393	Oreochromis_niloticus
ENSACAG00000001418	RNF17	94	47.162	ENSOCUG00000007384	RNF17	92	47.097	Oryctolagus_cuniculus
ENSACAG00000001418	RNF17	75	34.800	ENSORLG00000012818	rnf17	85	34.687	Oryzias_latipes
ENSACAG00000001418	RNF17	75	34.547	ENSORLG00020009879	-	76	34.687	Oryzias_latipes_hni
ENSACAG00000001418	RNF17	75	34.719	ENSORLG00015013027	-	76	34.606	Oryzias_latipes_hsok
ENSACAG00000001418	RNF17	68	33.212	ENSOMEG00000009891	rnf17	85	33.029	Oryzias_melastigma
ENSACAG00000001418	RNF17	94	45.733	ENSOGAG00000014803	RNF17	92	45.733	Otolemur_garnettii
ENSACAG00000001418	RNF17	94	45.920	ENSOARG00000014641	RNF17	94	45.920	Ovis_aries
ENSACAG00000001418	RNF17	78	50.512	ENSPPAG00000028779	RNF17	100	48.000	Pan_paniscus
ENSACAG00000001418	RNF17	94	47.066	ENSPPRG00000009230	RNF17	99	47.493	Panthera_pardus
ENSACAG00000001418	RNF17	94	47.132	ENSPTIG00000001738	RNF17	99	47.345	Panthera_tigris_altaica
ENSACAG00000001418	RNF17	94	45.419	ENSPTRG00000005713	RNF17	100	48.000	Pan_troglodytes
ENSACAG00000001418	RNF17	93	45.229	ENSPANG00000007640	RNF17	99	48.230	Papio_anubis
ENSACAG00000001418	RNF17	77	35.420	ENSPKIG00000001648	rnf17	90	35.750	Paramormyrops_kingsleyae
ENSACAG00000001418	RNF17	75	54.187	ENSPSIG00000011245	RNF17	99	54.269	Pelodiscus_sinensis
ENSACAG00000001418	RNF17	92	46.459	ENSPEMG00000008693	Rnf17	91	46.459	Peromyscus_maniculatus_bairdii
ENSACAG00000001418	RNF17	68	51.648	ENSPCIG00000009190	-	96	51.552	Phascolarctos_cinereus
ENSACAG00000001418	RNF17	92	31.412	ENSPFOG00000007124	rnf17	93	31.606	Poecilia_formosa
ENSACAG00000001418	RNF17	93	31.717	ENSPLAG00000006198	rnf17	74	34.897	Poecilia_latipinna
ENSACAG00000001418	RNF17	93	31.651	ENSPMEG00000022432	rnf17	92	31.651	Poecilia_mexicana
ENSACAG00000001418	RNF17	74	32.057	ENSPREG00000001414	rnf17	83	32.341	Poecilia_reticulata
ENSACAG00000001418	RNF17	93	45.128	ENSPPYG00000005215	RNF17	92	44.931	Pongo_abelii
ENSACAG00000001418	RNF17	59	53.012	ENSPCAG00000002665	RNF17	61	53.012	Procavia_capensis
ENSACAG00000001418	RNF17	85	35.491	ENSPCOG00000020211	RNF17	99	34.860	Propithecus_coquereli
ENSACAG00000001418	RNF17	91	59.124	ENSPVAG00000013021	RNF17	89	59.124	Pteropus_vampyrus
ENSACAG00000001418	RNF17	75	35.530	ENSPNAG00000027505	rnf17	85	35.530	Pygocentrus_nattereri
ENSACAG00000001418	RNF17	92	45.957	ENSRNOG00000008059	Rnf17	91	46.058	Rattus_norvegicus
ENSACAG00000001418	RNF17	93	44.335	ENSRBIG00000027010	RNF17	91	44.169	Rhinopithecus_bieti
ENSACAG00000001418	RNF17	93	44.902	ENSRROG00000022801	RNF17	99	47.788	Rhinopithecus_roxellana
ENSACAG00000001418	RNF17	93	45.036	ENSSBOG00000021661	RNF17	99	48.230	Saimiri_boliviensis_boliviensis
ENSACAG00000001418	RNF17	96	48.720	ENSSHAG00000005609	RNF17	94	48.720	Sarcophilus_harrisii
ENSACAG00000001418	RNF17	75	34.434	ENSSFOG00015023037	rnf17	89	34.434	Scleropages_formosus
ENSACAG00000001418	RNF17	73	33.610	ENSSMAG00000007429	rnf17	74	34.982	Scophthalmus_maximus
ENSACAG00000001418	RNF17	71	34.436	ENSSDUG00000013530	rnf17	77	34.748	Seriola_dumerili
ENSACAG00000001418	RNF17	71	34.351	ENSSLDG00000019577	rnf17	75	35.058	Seriola_lalandi_dorsalis
ENSACAG00000001418	RNF17	81	47.181	ENSSARG00000003016	RNF17	74	49.477	Sorex_araneus
ENSACAG00000001418	RNF17	88	47.555	ENSSPUG00000008917	RNF17	94	47.555	Sphenodon_punctatus
ENSACAG00000001418	RNF17	70	34.549	ENSSPAG00000001925	rnf17	76	35.096	Stegastes_partitus
ENSACAG00000001418	RNF17	91	46.823	ENSSSCG00000009572	RNF17	91	46.823	Sus_scrofa
ENSACAG00000001418	RNF17	71	48.331	ENSTGUG00000011267	-	100	48.331	Taeniopygia_guttata
ENSACAG00000001418	RNF17	77	33.678	ENSTRUG00000015498	rnf17	78	33.745	Takifugu_rubripes
ENSACAG00000001418	RNF17	75	32.397	ENSTNIG00000015681	rnf17	99	32.479	Tetraodon_nigroviridis
ENSACAG00000001418	RNF17	80	47.383	ENSTBEG00000000282	RNF17	80	47.383	Tupaia_belangeri
ENSACAG00000001418	RNF17	92	43.783	ENSTTRG00000012698	RNF17	92	43.427	Tursiops_truncatus
ENSACAG00000001418	RNF17	82	54.762	ENSVPAG00000011388	RNF17	76	54.762	Vicugna_pacos
ENSACAG00000001418	RNF17	94	47.248	ENSVVUG00000006226	RNF17	91	50.950	Vulpes_vulpes
ENSACAG00000001418	RNF17	72	39.304	ENSXETG00000034020	RNF17	99	43.951	Xenopus_tropicalis
ENSACAG00000001418	RNF17	68	33.813	ENSXCOG00000018295	rnf17	96	31.152	Xiphophorus_couchianus
ENSACAG00000001418	RNF17	72	33.842	ENSXMAG00000014747	rnf17	77	34.709	Xiphophorus_maculatus