EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000001569 (Gene tree)
Gene ID: 100554652
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 13550 bases
Position: chrGL343879.1:38822-52371
Accession: 100554652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000001616	RRM_1	PF00076.22	2.1e-33	1	2
ENSACAP00000001616	RRM_1	PF00076.22	2.1e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000001655	RBM23-201	1933	XM_008123346	ENSACAP00000001616	466 (aa)	XP_008121553	H9G5F2

Gene Model

Click here to download ENSACAG00000001569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000001569's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000001569	RBM23	51	34.177	ENSACAG00000011841	PABPC1L	57	35.338
ENSACAG00000001569	RBM23	51	31.333	ENSACAG00000016470	PABPC1	58	41.667
ENSACAG00000001569	RBM23	96	55.824	ENSACAG00000006436	RBM39	59	68.489

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000001569	RBM23	96	73.742	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSACAG00000001569	RBM23	66	83.019	ENSAMEG00000007322	RBM23	72	81.269	Ailuropoda_melanoleuca
ENSACAG00000001569	RBM23	96	54.788	ENSANAG00000033790	-	74	68.125	Aotus_nancymaae
ENSACAG00000001569	RBM23	96	65.574	ENSBTAG00000038333	RBM23	70	81.571	Bos_taurus
ENSACAG00000001569	RBM23	96	67.396	ENSCJAG00000008482	RBM23	78	76.524	Callithrix_jacchus
ENSACAG00000001569	RBM23	68	77.778	ENSCAFG00000011217	RBM23	75	76.524	Canis_familiaris
ENSACAG00000001569	RBM23	68	82.972	ENSCAFG00020007711	RBM23	72	82.569	Canis_lupus_dingo
ENSACAG00000001569	RBM23	96	69.296	ENSCHIG00000025709	RBM23	70	81.269	Capra_hircus
ENSACAG00000001569	RBM23	96	71.209	ENSTSYG00000014755	RBM23	100	83.813	Carlito_syrichta
ENSACAG00000001569	RBM23	96	61.707	ENSCCAG00000028584	-	100	72.161	Cebus_capucinus
ENSACAG00000001569	RBM23	96	70.241	ENSCCAG00000025114	-	75	81.957	Cebus_capucinus
ENSACAG00000001569	RBM23	96	70.675	ENSCATG00000017832	RBM23	100	81.119	Cercocebus_atys
ENSACAG00000001569	RBM23	96	70.798	ENSCSAG00000016213	RBM23	72	81.155	Chlorocebus_sabaeus
ENSACAG00000001569	RBM23	99	75.974	ENSCPBG00000026096	RBM23	77	88.889	Chrysemys_picta_bellii
ENSACAG00000001569	RBM23	72	80.347	ENSCANG00000001893	RBM23	79	81.707	Colobus_angolensis_palliatus
ENSACAG00000001569	RBM23	96	74.945	ENSDNOG00000032457	RBM23	72	82.500	Dasypus_novemcinctus
ENSACAG00000001569	RBM23	59	82.857	ENSDORG00000004926	-	100	82.143	Dipodomys_ordii
ENSACAG00000001569	RBM23	89	70.481	ENSEASG00005011696	RBM23	97	64.846	Equus_asinus_asinus
ENSACAG00000001569	RBM23	96	70.330	ENSECAG00000009910	RBM23	100	69.231	Equus_caballus
ENSACAG00000001569	RBM23	96	70.241	ENSEEUG00000015560	RBM23	72	80.615	Erinaceus_europaeus
ENSACAG00000001569	RBM23	68	83.282	ENSFCAG00000006632	RBM23	75	83.180	Felis_catus
ENSACAG00000001569	RBM23	96	70.913	ENSGGOG00000015707	RBM23	75	82.099	Gorilla_gorilla
ENSACAG00000001569	RBM23	96	65.385	ENSHGLG00100006114	RBM23	71	77.673	Heterocephalus_glaber_male
ENSACAG00000001569	RBM23	59	83.513	ENSSTOG00000010354	RBM23	100	82.796	Ictidomys_tridecemlineatus
ENSACAG00000001569	RBM23	96	70.870	ENSLAFG00000018567	RBM23	100	68.490	Loxodonta_africana
ENSACAG00000001569	RBM23	96	70.798	ENSMFAG00000037595	RBM23	75	81.459	Macaca_fascicularis
ENSACAG00000001569	RBM23	96	71.008	ENSMMUG00000018381	RBM23	75	81.459	Macaca_mulatta
ENSACAG00000001569	RBM23	96	71.247	ENSMNEG00000042442	RBM23	74	82.209	Macaca_nemestrina
ENSACAG00000001569	RBM23	96	67.245	ENSMLEG00000039954	RBM23	74	77.644	Mandrillus_leucophaeus
ENSACAG00000001569	RBM23	96	72.345	ENSMICG00000006364	RBM23	100	84.727	Microcebus_murinus
ENSACAG00000001569	RBM23	67	85.127	ENSMODG00000024448	RBM23	71	85.093	Monodelphis_domestica
ENSACAG00000001569	RBM23	68	82.716	ENSMPUG00000007151	RBM23	73	82.622	Mustela_putorius_furo
ENSACAG00000001569	RBM23	96	67.177	ENSMLUG00000012923	RBM23	72	77.846	Myotis_lucifugus
ENSACAG00000001569	RBM23	96	70.440	ENSNLEG00000014792	RBM23	75	81.515	Nomascus_leucogenys
ENSACAG00000001569	RBM23	54	93.431	ENSMEUG00000014548	-	53	93.431	Notamacropus_eugenii
ENSACAG00000001569	RBM23	68	79.077	ENSOPRG00000001092	RBM23	72	78.769	Ochotona_princeps
ENSACAG00000001569	RBM23	68	42.857	ENSOANG00000008908	-	58	46.809	Ornithorhynchus_anatinus
ENSACAG00000001569	RBM23	68	81.875	ENSOCUG00000002006	RBM23	72	81.231	Oryctolagus_cuniculus
ENSACAG00000001569	RBM23	68	79.762	ENSOGAG00000014794	RBM23	76	79.762	Otolemur_garnettii
ENSACAG00000001569	RBM23	96	68.443	ENSOARG00000019398	RBM23	70	80.060	Ovis_aries
ENSACAG00000001569	RBM23	96	70.870	ENSPPAG00000037922	RBM23	75	80.851	Pan_paniscus
ENSACAG00000001569	RBM23	68	83.282	ENSPPRG00000023344	RBM23	75	83.180	Panthera_pardus
ENSACAG00000001569	RBM23	68	83.282	ENSPTIG00000007831	RBM23	76	83.180	Panthera_tigris_altaica
ENSACAG00000001569	RBM23	96	69.958	ENSPTRG00000006151	RBM23	75	80.547	Pan_troglodytes
ENSACAG00000001569	RBM23	72	80.460	ENSPANG00000001324	RBM23	100	82.332	Papio_anubis
ENSACAG00000001569	RBM23	67	85.127	ENSPCIG00000027773	RBM23	70	85.093	Phascolarctos_cinereus
ENSACAG00000001569	RBM23	68	82.569	ENSPPYG00000005649	RBM23	75	81.957	Pongo_abelii
ENSACAG00000001569	RBM23	96	55.224	ENSPCAG00000006669	RBM23	73	66.561	Procavia_capensis
ENSACAG00000001569	RBM23	96	72.527	ENSPCOG00000018564	RBM23	100	84.173	Propithecus_coquereli
ENSACAG00000001569	RBM23	96	71.335	ENSPVAG00000013785	RBM23	72	84.688	Pteropus_vampyrus
ENSACAG00000001569	RBM23	96	70.588	ENSRBIG00000039276	RBM23	75	81.155	Rhinopithecus_bieti
ENSACAG00000001569	RBM23	96	70.588	ENSRROG00000044026	RBM23	75	81.155	Rhinopithecus_roxellana
ENSACAG00000001569	RBM23	96	71.787	ENSSBOG00000023037	-	70	82.710	Saimiri_boliviensis_boliviensis
ENSACAG00000001569	RBM23	93	58.182	ENSSBOG00000034977	-	72	68.919	Saimiri_boliviensis_boliviensis
ENSACAG00000001569	RBM23	67	85.127	ENSSHAG00000012932	RBM23	70	85.093	Sarcophilus_harrisii
ENSACAG00000001569	RBM23	68	80.923	ENSSARG00000005165	RBM23	72	80.547	Sorex_araneus
ENSACAG00000001569	RBM23	68	90.536	ENSSPUG00000000489	RBM23	71	90.221	Sphenodon_punctatus
ENSACAG00000001569	RBM23	96	72.467	ENSSSCG00000026700	RBM23	100	71.806	Sus_scrofa
ENSACAG00000001569	RBM23	96	68.251	ENSTBEG00000011543	RBM23	71	77.711	Tupaia_belangeri
ENSACAG00000001569	RBM23	96	70.640	ENSTTRG00000001500	RBM23	72	83.540	Tursiops_truncatus
ENSACAG00000001569	RBM23	68	83.591	ENSUAMG00000008524	RBM23	72	83.180	Ursus_americanus
ENSACAG00000001569	RBM23	68	83.591	ENSUMAG00000014075	RBM23	72	83.180	Ursus_maritimus
ENSACAG00000001569	RBM23	68	82.972	ENSVVUG00000019815	RBM23	72	82.569	Vulpes_vulpes
ENSACAG00000001569	RBM23	65	75.748	ENSXETG00000022623	rbm23	71	74.522	Xenopus_tropicalis