EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACAG00000001645 (Gene tree)
Gene ID
100555963
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Anolis_carolinensis
Status
putative
Strand
Minus strand
Length
19208 bases
Position
chrGL344533.1:6801-26008
Accession
100555963
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACAP00000001620RRM_1PF00076.226.9e-4412
ENSACAP00000001620RRM_1PF00076.226.9e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACAT00000001659PUF60-2016548XM_003230154ENSACAP00000001620541 (aa)XP_003230202H9G5F4
Gene Model
Click here to download ENSACAG00000001645's gene model file
Pathways
Pathway IDPathway NameSource
acs03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000001645's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACAG00000001645PUF605035.294ENSACAG00000015489U2AF26137.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACAG00000001645PUF609896.023ENSG00000179950PUF6010096.917Homo_sapiens
ENSACAG00000001645PUF609685.361ENSAPOG00000001713puf60b9885.361Acanthochromis_polyacanthus
ENSACAG00000001645PUF609794.118ENSAMEG00000006406PUF609394.275Ailuropoda_melanoleuca
ENSACAG00000001645PUF609676.527ENSACIG00000003263-9976.762Amphilophus_citrinellus
ENSACAG00000001645PUF609685.305ENSACIG00000021705puf60b10085.305Amphilophus_citrinellus
ENSACAG00000001645PUF609685.687ENSAOCG00000005395puf60b10085.687Amphiprion_ocellaris
ENSACAG00000001645PUF609681.453ENSAOCG00000015558-9782.027Amphiprion_ocellaris
ENSACAG00000001645PUF609679.848ENSAPEG00000011923puf60b9879.848Amphiprion_percula
ENSACAG00000001645PUF609671.947ENSAPEG00000001836-9972.075Amphiprion_percula
ENSACAG00000001645PUF609681.609ENSATEG00000006303-9881.992Anabas_testudineus
ENSACAG00000001645PUF609785.227ENSATEG00000001730puf60b9885.227Anabas_testudineus
ENSACAG00000001645PUF609797.519ENSAPLG00000010150PUF609997.519Anas_platyrhynchos
ENSACAG00000001645PUF609896.023ENSANAG00000018626PUF6010096.917Aotus_nancymaae
ENSACAG00000001645PUF609685.305ENSACLG00000004462puf60b10085.305Astatotilapia_calliptera
ENSACAG00000001645PUF609677.138ENSAMXG00000041030puf60b10074.026Astyanax_mexicanus
ENSACAG00000001645PUF609784.015ENSAMXG00000036570puf60a10080.909Astyanax_mexicanus
ENSACAG00000001645PUF609896.023ENSBTAG00000037493PUF609996.374Bos_taurus
ENSACAG00000001645PUF608049.221WBGene00004389rnp-68252.013Caenorhabditis_elegans
ENSACAG00000001645PUF609896.212ENSCJAG00000021485PUF609996.388Callithrix_jacchus
ENSACAG00000001645PUF609795.825ENSCAFG00000001400PUF609396.183Canis_familiaris
ENSACAG00000001645PUF609896.212ENSCAFG00020018754PUF609996.388Canis_lupus_dingo
ENSACAG00000001645PUF609796.015ENSCHIG00000001618PUF608796.374Capra_hircus
ENSACAG00000001645PUF609896.402ENSTSYG00000011912PUF6010097.110Carlito_syrichta
ENSACAG00000001645PUF609790.772ENSCPOG00000014613PUF609490.909Cavia_porcellus
ENSACAG00000001645PUF609896.402ENSCCAG00000007744PUF609996.578Cebus_capucinus
ENSACAG00000001645PUF609896.023ENSCATG00000035405PUF609996.198Cercocebus_atys
ENSACAG00000001645PUF609796.395ENSCLAG00000009154PUF609296.756Chinchilla_lanigera
ENSACAG00000001645PUF609696.917ENSCSAG00000008878PUF6010096.917Chlorocebus_sabaeus
ENSACAG00000001645PUF609995.725ENSCPBG00000005595PUF6010095.725Chrysemys_picta_bellii
ENSACAG00000001645PUF609749.343ENSCING00000008436-9848.519Ciona_intestinalis
ENSACAG00000001645PUF606159.644ENSCING00000002156-8759.644Ciona_intestinalis
ENSACAG00000001645PUF609454.943ENSCSAVG00000001385-9954.876Ciona_savignyi
ENSACAG00000001645PUF609449.023ENSCSAVG00000004765-9749.315Ciona_savignyi
ENSACAG00000001645PUF607896.429ENSCANG00000041843PUF6010096.429Colobus_angolensis_palliatus
ENSACAG00000001645PUF609795.825ENSCGRG00001017442Puf609296.367Cricetulus_griseus_chok1gshd
ENSACAG00000001645PUF609795.825ENSCGRG00000003717Puf609296.367Cricetulus_griseus_crigri
ENSACAG00000001645PUF609784.659ENSCSEG00000019887puf60b9284.659Cynoglossus_semilaevis
ENSACAG00000001645PUF609672.865ENSCSEG00000014845-8974.383Cynoglossus_semilaevis
ENSACAG00000001645PUF609684.542ENSCVAG00000009386puf60b10085.496Cyprinodon_variegatus
ENSACAG00000001645PUF608879.916ENSCVAG00000001560-9879.916Cyprinodon_variegatus
ENSACAG00000001645PUF609686.441ENSDARG00000032175puf60a9993.617Danio_rerio
ENSACAG00000001645PUF609678.692ENSDARG00000001241puf60b9995.238Danio_rerio
ENSACAG00000001645PUF609481.961ENSDNOG00000043278PUF609081.961Dasypus_novemcinctus
ENSACAG00000001645PUF609796.205ENSDORG00000004585Puf609596.205Dipodomys_ordii
ENSACAG00000001645PUF609761.616ENSEBUG00000014291puf60b8464.686Eptatretus_burgeri
ENSACAG00000001645PUF609470.020ENSEBUG00000005470-8870.158Eptatretus_burgeri
ENSACAG00000001645PUF609896.212ENSEASG00005009695PUF609996.388Equus_asinus_asinus
ENSACAG00000001645PUF609796.388ENSECAG00000024681PUF609796.388Equus_caballus
ENSACAG00000001645PUF609884.544ENSELUG00000018443-9884.934Esox_lucius
ENSACAG00000001645PUF609684.321ENSELUG00000006507puf60b9980.769Esox_lucius
ENSACAG00000001645PUF609895.833ENSFCAG00000001045PUF6010096.724Felis_catus
ENSACAG00000001645PUF609784.791ENSFALG00000001136PUF609985.958Ficedula_albicollis
ENSACAG00000001645PUF609796.395ENSFDAG00000017177PUF609296.756Fukomys_damarensis
ENSACAG00000001645PUF609279.042ENSFHEG00000021687PUF6010079.878Fundulus_heteroclitus
ENSACAG00000001645PUF609784.091ENSFHEG00000020046puf60b10085.496Fundulus_heteroclitus
ENSACAG00000001645PUF609771.482ENSGMOG00000006392puf60b9970.732Gadus_morhua
ENSACAG00000001645PUF606496.542ENSGALG00000039901PUF609496.542Gallus_gallus
ENSACAG00000001645PUF609783.523ENSGAFG00000021040puf60b10084.733Gambusia_affinis
ENSACAG00000001645PUF609678.503ENSGAFG00000004334-9978.499Gambusia_affinis
ENSACAG00000001645PUF609968.519ENSGACG00000001484-10069.349Gasterosteus_aculeatus
ENSACAG00000001645PUF609872.897ENSGACG00000004717puf60b9972.693Gasterosteus_aculeatus
ENSACAG00000001645PUF609995.725ENSGAGG00000013289PUF609395.725Gopherus_agassizii
ENSACAG00000001645PUF609896.023ENSGGOG00000004646PUF609996.198Gorilla_gorilla
ENSACAG00000001645PUF609784.848ENSHBUG00000015118puf60b10085.305Haplochromis_burtoni
ENSACAG00000001645PUF609681.489ENSHBUG00000009634-9881.143Haplochromis_burtoni
ENSACAG00000001645PUF609796.395ENSHGLG00000006111PUF609296.756Heterocephalus_glaber_female
ENSACAG00000001645PUF609796.395ENSHGLG00100012362PUF609296.756Heterocephalus_glaber_male
ENSACAG00000001645PUF609681.801ENSHCOG00000015541puf60b9981.111Hippocampus_comes
ENSACAG00000001645PUF609466.797ENSHCOG00000000378-9964.860Hippocampus_comes
ENSACAG00000001645PUF609677.881ENSIPUG00000004660puf60b9977.944Ictalurus_punctatus
ENSACAG00000001645PUF609681.767ENSIPUG00000002453puf60a9981.767Ictalurus_punctatus
ENSACAG00000001645PUF609796.395ENSSTOG00000025037PUF609496.395Ictidomys_tridecemlineatus
ENSACAG00000001645PUF609796.015ENSJJAG00000001076Puf609396.374Jaculus_jaculus
ENSACAG00000001645PUF609678.195ENSKMAG00000010106-10075.888Kryptolebias_marmoratus
ENSACAG00000001645PUF609684.542ENSKMAG00000016745puf60b10085.496Kryptolebias_marmoratus
ENSACAG00000001645PUF609784.416ENSLBEG00000012505puf60b10084.416Labrus_bergylta
ENSACAG00000001645PUF606790.164ENSLACG00000005456PUF609990.164Latimeria_chalumnae
ENSACAG00000001645PUF609890.038ENSLOCG00000010106puf60b9890.875Lepisosteus_oculatus
ENSACAG00000001645PUF609795.256ENSLAFG00000022929PUF609495.611Loxodonta_africana
ENSACAG00000001645PUF609896.023ENSMFAG00000043373PUF609996.198Macaca_fascicularis
ENSACAG00000001645PUF609896.023ENSMMUG00000013558PUF609996.198Macaca_mulatta
ENSACAG00000001645PUF609896.023ENSMNEG00000031099PUF609996.198Macaca_nemestrina
ENSACAG00000001645PUF609696.917ENSMLEG00000040009PUF6010096.917Mandrillus_leucophaeus
ENSACAG00000001645PUF609784.586ENSMAMG00000010394puf60b10083.178Mastacembelus_armatus
ENSACAG00000001645PUF609682.443ENSMAMG00000019476-9882.286Mastacembelus_armatus
ENSACAG00000001645PUF609685.305ENSMZEG00005018515puf60b10085.305Maylandia_zebra
ENSACAG00000001645PUF609681.679ENSMZEG00005019425-9881.333Maylandia_zebra
ENSACAG00000001645PUF609797.519ENSMGAG00000013070PUF609897.519Meleagris_gallopavo
ENSACAG00000001645PUF609278.287ENSMAUG00000018549-9578.287Mesocricetus_auratus
ENSACAG00000001645PUF606995.418ENSMAUG00000014267-8996.185Mesocricetus_auratus
ENSACAG00000001645PUF609896.212ENSMICG00000012226PUF609996.565Microcebus_murinus
ENSACAG00000001645PUF609795.825ENSMOCG00000018780Puf609396.367Microtus_ochrogaster
ENSACAG00000001645PUF609672.692ENSMMOG00000018059-9975.283Mola_mola
ENSACAG00000001645PUF609685.305ENSMMOG00000004217puf60b10085.305Mola_mola
ENSACAG00000001645PUF609795.825ENSMODG00000009161PUF609496.183Monodelphis_domestica
ENSACAG00000001645PUF609680.762ENSMALG00000000200-9879.924Monopterus_albus
ENSACAG00000001645PUF609777.652ENSMALG00000006797puf60b9877.652Monopterus_albus
ENSACAG00000001645PUF609796.015MGP_CAROLIEiJ_G0019910Puf609296.374Mus_caroli
ENSACAG00000001645PUF609796.015ENSMUSG00000002524Puf609296.374Mus_musculus
ENSACAG00000001645PUF609796.015MGP_PahariEiJ_G0019920Puf609296.374Mus_pahari
ENSACAG00000001645PUF609796.015MGP_SPRETEiJ_G0020812Puf609296.374Mus_spretus
ENSACAG00000001645PUF609796.015ENSMPUG00000008137PUF609296.374Mustela_putorius_furo
ENSACAG00000001645PUF609889.036ENSMLUG00000013032-9989.354Myotis_lucifugus
ENSACAG00000001645PUF609795.446ENSMLUG00000000238-9495.446Myotis_lucifugus
ENSACAG00000001645PUF609796.015ENSNGAG00000000712Puf6010096.917Nannospalax_galili
ENSACAG00000001645PUF608180.973ENSNBRG00000013047puf60b9783.879Neolamprologus_brichardi
ENSACAG00000001645PUF609681.836ENSNBRG00000017223-9881.679Neolamprologus_brichardi
ENSACAG00000001645PUF609895.644ENSNLEG00000002156PUF609995.644Nomascus_leucogenys
ENSACAG00000001645PUF607199.317ENSOPRG00000002147PUF607599.317Ochotona_princeps
ENSACAG00000001645PUF609472.157ENSODEG00000015513-9670.385Octodon_degus
ENSACAG00000001645PUF6071100.000ENSODEG00000014024-90100.000Octodon_degus
ENSACAG00000001645PUF609784.848ENSONIG00000006247puf60b9884.848Oreochromis_niloticus
ENSACAG00000001645PUF609681.870ENSONIG00000014030-9781.524Oreochromis_niloticus
ENSACAG00000001645PUF609577.563ENSOANG00000006962PUF609877.930Ornithorhynchus_anatinus
ENSACAG00000001645PUF609784.659ENSORLG00000012279puf60b10084.351Oryzias_latipes
ENSACAG00000001645PUF609677.966ENSORLG00000028655-9976.909Oryzias_latipes
ENSACAG00000001645PUF609678.558ENSORLG00020018144-9777.486Oryzias_latipes_hni
ENSACAG00000001645PUF609784.659ENSORLG00020007333puf6010084.351Oryzias_latipes_hni
ENSACAG00000001645PUF609783.962ENSORLG00015007718puf60b10084.030Oryzias_latipes_hsok
ENSACAG00000001645PUF609678.558ENSORLG00015016833-9777.486Oryzias_latipes_hsok
ENSACAG00000001645PUF609679.771ENSOMEG00000022185-9779.771Oryzias_melastigma
ENSACAG00000001645PUF609782.276ENSOMEG00000001643puf60b9982.731Oryzias_melastigma
ENSACAG00000001645PUF609796.395ENSOGAG00000006259PUF609496.395Otolemur_garnettii
ENSACAG00000001645PUF609793.893ENSOARG00000016235PUF609893.893Ovis_aries
ENSACAG00000001645PUF609896.023ENSPPAG00000029933PUF609996.198Pan_paniscus
ENSACAG00000001645PUF609895.833ENSPPRG00000003257PUF6010096.724Panthera_pardus
ENSACAG00000001645PUF609793.893ENSPTIG00000009795PUF609993.893Panthera_tigris_altaica
ENSACAG00000001645PUF609896.212ENSPTRG00000020670PUF609996.388Pan_troglodytes
ENSACAG00000001645PUF609895.833ENSPTRG00000043963-9995.833Pan_troglodytes
ENSACAG00000001645PUF609896.023ENSPANG00000021936PUF609996.198Papio_anubis
ENSACAG00000001645PUF609885.448ENSPKIG00000004295puf60a9990.962Paramormyrops_kingsleyae
ENSACAG00000001645PUF609887.054ENSPKIG00000012204puf60b10088.145Paramormyrops_kingsleyae
ENSACAG00000001645PUF609797.137ENSPSIG00000004679PUF609997.137Pelodiscus_sinensis
ENSACAG00000001645PUF609683.871ENSPMGG00000013444puf60b9983.871Periophthalmus_magnuspinnatus
ENSACAG00000001645PUF609795.825ENSPEMG00000008820Puf609296.367Peromyscus_maniculatus_bairdii
ENSACAG00000001645PUF609796.756ENSPCIG00000020270PUF609996.388Phascolarctos_cinereus
ENSACAG00000001645PUF6010077.901ENSPFOG00000011118-9780.614Poecilia_formosa
ENSACAG00000001645PUF609784.091ENSPFOG00000019217puf60b9981.818Poecilia_formosa
ENSACAG00000001645PUF609684.542ENSPLAG00000010754puf60b10085.496Poecilia_latipinna
ENSACAG00000001645PUF6010077.901ENSPLAG00000017025-9080.230Poecilia_latipinna
ENSACAG00000001645PUF6010078.085ENSPMEG00000009767-9080.806Poecilia_mexicana
ENSACAG00000001645PUF609784.091ENSPMEG00000000838puf60b10085.496Poecilia_mexicana
ENSACAG00000001645PUF609781.365ENSPREG00000005440puf60b9883.633Poecilia_reticulata
ENSACAG00000001645PUF607894.762ENSPPYG00000018951-9594.762Pongo_abelii
ENSACAG00000001645PUF607896.667ENSPCAG00000014837PUF6010096.667Procavia_capensis
ENSACAG00000001645PUF609896.212ENSPCOG00000027981PUF609996.565Propithecus_coquereli
ENSACAG00000001645PUF609699.367ENSPVAG00000016167PUF608199.367Pteropus_vampyrus
ENSACAG00000001645PUF609681.679ENSPNYG00000004273-9881.333Pundamilia_nyererei
ENSACAG00000001645PUF609685.305ENSPNYG00000002556puf60b10085.305Pundamilia_nyererei
ENSACAG00000001645PUF609782.364ENSPNAG00000019909puf60a10081.835Pygocentrus_nattereri
ENSACAG00000001645PUF609975.368ENSPNAG00000019415puf60b8974.570Pygocentrus_nattereri
ENSACAG00000001645PUF609796.015ENSRNOG00000009960Puf609396.374Rattus_norvegicus
ENSACAG00000001645PUF609896.023ENSRBIG00000035274PUF609996.198Rhinopithecus_bieti
ENSACAG00000001645PUF609896.023ENSRROG00000029360PUF609996.198Rhinopithecus_roxellana
ENSACAG00000001645PUF609993.855ENSSBOG00000027089PUF609895.057Saimiri_boliviensis_boliviensis
ENSACAG00000001645PUF608895.158ENSSHAG00000006668PUF609095.551Sarcophilus_harrisii
ENSACAG00000001645PUF609681.818ENSSFOG00015019619puf60b9985.312Scleropages_formosus
ENSACAG00000001645PUF609980.389ENSSFOG00015019371puf60a9887.000Scleropages_formosus
ENSACAG00000001645PUF607092.883ENSSMAG00000016381puf60b7392.883Scophthalmus_maximus
ENSACAG00000001645PUF609579.846ENSSDUG00000007048-9779.846Seriola_dumerili
ENSACAG00000001645PUF609782.746ENSSDUG00000009935puf60b9984.137Seriola_dumerili
ENSACAG00000001645PUF609679.962ENSSLDG00000007366-9980.377Seriola_lalandi_dorsalis
ENSACAG00000001645PUF609784.557ENSSLDG00000024011puf60b10083.364Seriola_lalandi_dorsalis
ENSACAG00000001645PUF606584.814ENSSPUG00000013518PUF609484.814Sphenodon_punctatus
ENSACAG00000001645PUF609681.404ENSSPAG00000020285-10082.476Stegastes_partitus
ENSACAG00000001645PUF609683.086ENSSPAG00000012144puf60b10083.551Stegastes_partitus
ENSACAG00000001645PUF609796.205ENSSSCG00000038800PUF609992.992Sus_scrofa
ENSACAG00000001645PUF609793.702ENSTGUG00000012797-9993.702Taeniopygia_guttata
ENSACAG00000001645PUF609783.902ENSTRUG00000005420puf60b10082.056Takifugu_rubripes
ENSACAG00000001645PUF609677.842ENSTRUG00000008843-10077.457Takifugu_rubripes
ENSACAG00000001645PUF609678.311ENSTNIG00000003069-9978.695Tetraodon_nigroviridis
ENSACAG00000001645PUF609783.902ENSTNIG00000013675puf60b9983.902Tetraodon_nigroviridis
ENSACAG00000001645PUF606093.980ENSTBEG00000002751-9993.980Tupaia_belangeri
ENSACAG00000001645PUF607877.937ENSTBEG00000001899-10079.083Tupaia_belangeri
ENSACAG00000001645PUF609696.339ENSTTRG00000017088PUF6010096.339Tursiops_truncatus
ENSACAG00000001645PUF609896.212ENSUAMG00000024917PUF609996.388Ursus_americanus
ENSACAG00000001645PUF609791.082ENSUMAG00000000272PUF609391.221Ursus_maritimus
ENSACAG00000001645PUF609796.205ENSVVUG00000022527PUF6010097.110Vulpes_vulpes
ENSACAG00000001645PUF609892.803ENSXETG00000012469puf609992.966Xenopus_tropicalis
ENSACAG00000001645PUF609681.298ENSXCOG00000012355puf60b10082.252Xiphophorus_couchianus
ENSACAG00000001645PUF609784.091ENSXMAG00000001862puf60b10085.496Xiphophorus_maculatus
ENSACAG00000001645PUF609677.543ENSXMAG00000010507-9877.543Xiphophorus_maculatus

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