EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000001676 (Gene tree)
Gene ID: 100566723
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 92724 bases
Position: chr1:96595969-96688692
Accession: 100566723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000001818	R3H	PF01424.22	1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000001862	R3HDM1-201	5657	XM_008112664	ENSACAP00000001818	1132 (aa)	XP_008110871	G1K9Z7

Gene Model

Click here to download ENSACAG00000001676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000001676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000001676	R3HDM1	84	56.479	ENSACAG00000006388	R3HDM2	95	56.479
ENSACAG00000001676	R3HDM1	69	53.715	ENSACAG00000010218	ARPP21	96	54.933

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000001676	R3HDM1	100	76.903	ENSG00000048991	R3HDM1	91	93.243	Homo_sapiens
ENSACAG00000001676	R3HDM1	89	50.184	ENSAPOG00000020850	r3hdm1	97	50.185	Acanthochromis_polyacanthus
ENSACAG00000001676	R3HDM1	100	77.165	ENSAMEG00000014886	R3HDM1	100	76.465	Ailuropoda_melanoleuca
ENSACAG00000001676	R3HDM1	89	49.491	ENSAOCG00000005192	r3hdm1	99	49.491	Amphiprion_ocellaris
ENSACAG00000001676	R3HDM1	89	46.771	ENSAPEG00000016108	r3hdm1	99	46.771	Amphiprion_percula
ENSACAG00000001676	R3HDM1	89	46.225	ENSATEG00000000232	r3hdm1	99	45.288	Anabas_testudineus
ENSACAG00000001676	R3HDM1	100	82.731	ENSAPLG00000015231	R3HDM1	100	82.379	Anas_platyrhynchos
ENSACAG00000001676	R3HDM1	100	77.098	ENSANAG00000035334	R3HDM1	100	76.836	Aotus_nancymaae
ENSACAG00000001676	R3HDM1	89	45.234	ENSACLG00000027282	r3hdm1	99	44.808	Astatotilapia_calliptera
ENSACAG00000001676	R3HDM1	61	39.718	ENSAMXG00000020587	arpp21	84	58.537	Astyanax_mexicanus
ENSACAG00000001676	R3HDM1	93	62.645	ENSAMXG00000003536	r3hdm1	100	62.558	Astyanax_mexicanus
ENSACAG00000001676	R3HDM1	93	72.182	ENSAMXG00000012861	R3HDM1	100	72.115	Astyanax_mexicanus
ENSACAG00000001676	R3HDM1	100	80.597	ENSBTAG00000013302	R3HDM1	100	80.334	Bos_taurus
ENSACAG00000001676	R3HDM1	100	77.145	ENSCJAG00000011718	R3HDM1	100	76.708	Callithrix_jacchus
ENSACAG00000001676	R3HDM1	100	77.340	ENSCAFG00000005075	R3HDM1	100	76.640	Canis_familiaris
ENSACAG00000001676	R3HDM1	100	79.790	ENSCAFG00020016119	R3HDM1	100	79.615	Canis_lupus_dingo
ENSACAG00000001676	R3HDM1	100	80.739	ENSCHIG00000020851	R3HDM1	100	80.563	Capra_hircus
ENSACAG00000001676	R3HDM1	100	76.769	ENSCPOG00000012784	R3HDM1	100	76.507	Cavia_porcellus
ENSACAG00000001676	R3HDM1	100	76.990	ENSCCAG00000027199	R3HDM1	100	76.028	Cebus_capucinus
ENSACAG00000001676	R3HDM1	100	79.003	ENSCATG00000023642	R3HDM1	100	78.478	Cercocebus_atys
ENSACAG00000001676	R3HDM1	100	77.031	ENSCLAG00000007962	R3HDM1	100	76.856	Chinchilla_lanigera
ENSACAG00000001676	R3HDM1	100	79.003	ENSCSAG00000016356	R3HDM1	100	78.478	Chlorocebus_sabaeus
ENSACAG00000001676	R3HDM1	88	66.406	ENSCHOG00000013638	R3HDM1	91	66.146	Choloepus_hoffmanni
ENSACAG00000001676	R3HDM1	92	84.512	ENSCPBG00000009645	R3HDM1	100	93.358	Chrysemys_picta_bellii
ENSACAG00000001676	R3HDM1	100	76.923	ENSCANG00000034748	R3HDM1	100	76.486	Colobus_angolensis_palliatus
ENSACAG00000001676	R3HDM1	99	77.807	ENSCGRG00001012357	R3hdm1	97	77.456	Cricetulus_griseus_chok1gshd
ENSACAG00000001676	R3HDM1	100	77.885	ENSCGRG00000012080	R3hdm1	100	77.448	Cricetulus_griseus_crigri
ENSACAG00000001676	R3HDM1	89	43.773	ENSCSEG00000008944	r3hdm1	99	44.374	Cynoglossus_semilaevis
ENSACAG00000001676	R3HDM1	89	48.794	ENSCVAG00000007582	r3hdm1	99	49.023	Cyprinodon_variegatus
ENSACAG00000001676	R3HDM1	64	37.313	ENSDARG00000061081	arpp21	92	35.338	Danio_rerio
ENSACAG00000001676	R3HDM1	100	74.913	ENSDNOG00000000771	R3HDM1	100	73.951	Dasypus_novemcinctus
ENSACAG00000001676	R3HDM1	100	68.920	ENSETEG00000013606	R3HDM1	100	68.860	Echinops_telfairi
ENSACAG00000001676	R3HDM1	100	80.334	ENSEASG00005007392	R3HDM1	100	85.222	Equus_asinus_asinus
ENSACAG00000001676	R3HDM1	100	80.193	ENSECAG00000019114	R3HDM1	100	85.222	Equus_caballus
ENSACAG00000001676	R3HDM1	83	75.046	ENSEEUG00000012589	R3HDM1	83	75.922	Erinaceus_europaeus
ENSACAG00000001676	R3HDM1	89	60.111	ENSELUG00000004909	R3HDM1	99	54.414	Esox_lucius
ENSACAG00000001676	R3HDM1	88	51.256	ENSELUG00000014413	r3hdm1	96	51.859	Esox_lucius
ENSACAG00000001676	R3HDM1	100	80.351	ENSFCAG00000027113	R3HDM1	100	85.468	Felis_catus
ENSACAG00000001676	R3HDM1	75	79.859	ENSFALG00000013731	R3HDM1	93	74.887	Ficedula_albicollis
ENSACAG00000001676	R3HDM1	100	76.856	ENSFDAG00000016478	R3HDM1	94	83.107	Fukomys_damarensis
ENSACAG00000001676	R3HDM1	89	47.878	ENSFHEG00000018713	r3hdm1	99	48.276	Fundulus_heteroclitus
ENSACAG00000001676	R3HDM1	59	68.696	ENSGMOG00000006042	-	82	63.636	Gadus_morhua
ENSACAG00000001676	R3HDM1	84	86.275	ENSGALG00000012246	R3HDM1	99	86.230	Gallus_gallus
ENSACAG00000001676	R3HDM1	79	47.763	ENSGAFG00000006203	r3hdm1	95	47.840	Gambusia_affinis
ENSACAG00000001676	R3HDM1	87	49.808	ENSGACG00000014925	r3hdm1	99	48.716	Gasterosteus_aculeatus
ENSACAG00000001676	R3HDM1	100	84.947	ENSGAGG00000007840	R3HDM1	100	84.331	Gopherus_agassizii
ENSACAG00000001676	R3HDM1	100	77.078	ENSGGOG00000008156	R3HDM1	100	76.553	Gorilla_gorilla
ENSACAG00000001676	R3HDM1	100	77.038	ENSHGLG00000015718	R3HDM1	100	76.687	Heterocephalus_glaber_female
ENSACAG00000001676	R3HDM1	100	56.892	ENSHGLG00100015374	-	100	56.102	Heterocephalus_glaber_male
ENSACAG00000001676	R3HDM1	100	76.950	ENSHGLG00100003184	-	100	76.599	Heterocephalus_glaber_male
ENSACAG00000001676	R3HDM1	80	44.269	ENSHCOG00000013366	r3hdm1	88	58.750	Hippocampus_comes
ENSACAG00000001676	R3HDM1	86	68.072	ENSIPUG00000013629	r3hdm1	95	69.688	Ictalurus_punctatus
ENSACAG00000001676	R3HDM1	82	66.348	ENSIPUG00000001676	R3HDM1	99	66.507	Ictalurus_punctatus
ENSACAG00000001676	R3HDM1	100	79.633	ENSSTOG00000007572	R3HDM1	100	79.283	Ictidomys_tridecemlineatus
ENSACAG00000001676	R3HDM1	95	75.676	ENSLACG00000005334	R3HDM1	100	76.572	Latimeria_chalumnae
ENSACAG00000001676	R3HDM1	100	67.532	ENSLOCG00000001641	r3hdm1	100	67.273	Lepisosteus_oculatus
ENSACAG00000001676	R3HDM1	100	80.052	ENSLAFG00000009065	R3HDM1	100	79.615	Loxodonta_africana
ENSACAG00000001676	R3HDM1	100	76.903	ENSMFAG00000030331	R3HDM1	100	84.236	Macaca_fascicularis
ENSACAG00000001676	R3HDM1	100	76.815	ENSMMUG00000009844	R3HDM1	100	76.290	Macaca_mulatta
ENSACAG00000001676	R3HDM1	100	76.815	ENSMNEG00000027793	R3HDM1	100	84.236	Macaca_nemestrina
ENSACAG00000001676	R3HDM1	100	76.903	ENSMLEG00000043189	R3HDM1	100	76.465	Mandrillus_leucophaeus
ENSACAG00000001676	R3HDM1	89	49.309	ENSMAMG00000004532	r3hdm1	99	48.706	Mastacembelus_armatus
ENSACAG00000001676	R3HDM1	89	48.796	ENSMZEG00005003157	r3hdm1	99	48.656	Maylandia_zebra
ENSACAG00000001676	R3HDM1	100	82.203	ENSMGAG00000012461	R3HDM1	100	81.938	Meleagris_gallopavo
ENSACAG00000001676	R3HDM1	100	77.594	ENSMAUG00000010315	R3hdm1	100	77.245	Mesocricetus_auratus
ENSACAG00000001676	R3HDM1	100	76.614	ENSMICG00000005900	-	100	75.829	Microcebus_murinus
ENSACAG00000001676	R3HDM1	96	57.847	ENSMICG00000042655	-	100	75.123	Microcebus_murinus
ENSACAG00000001676	R3HDM1	90	79.008	ENSMODG00000000923	R3HDM1	97	78.626	Monodelphis_domestica
ENSACAG00000001676	R3HDM1	99	44.913	ENSMALG00000009000	r3hdm1	100	45.379	Monopterus_albus
ENSACAG00000001676	R3HDM1	100	77.496	MGP_CAROLIEiJ_G0014543	R3hdm1	100	77.145	Mus_caroli
ENSACAG00000001676	R3HDM1	100	77.320	ENSMUSG00000056211	R3hdm1	100	76.970	Mus_musculus
ENSACAG00000001676	R3HDM1	100	77.233	MGP_PahariEiJ_G0027779	R3hdm1	94	82.913	Mus_pahari
ENSACAG00000001676	R3HDM1	100	77.320	MGP_SPRETEiJ_G0015350	R3hdm1	100	76.970	Mus_spretus
ENSACAG00000001676	R3HDM1	100	77.758	ENSMPUG00000002412	R3HDM1	100	76.795	Mustela_putorius_furo
ENSACAG00000001676	R3HDM1	100	76.527	ENSMLUG00000013824	R3HDM1	100	75.567	Myotis_lucifugus
ENSACAG00000001676	R3HDM1	100	76.640	ENSNLEG00000008622	R3HDM1	100	76.465	Nomascus_leucogenys
ENSACAG00000001676	R3HDM1	89	67.917	ENSMEUG00000011784	R3HDM1	99	67.720	Notamacropus_eugenii
ENSACAG00000001676	R3HDM1	100	76.290	ENSODEG00000008607	R3HDM1	100	76.080	Octodon_degus
ENSACAG00000001676	R3HDM1	95	46.201	ENSONIG00000012017	r3hdm1	99	45.779	Oreochromis_niloticus
ENSACAG00000001676	R3HDM1	100	76.950	ENSOANG00000007987	R3HDM1	100	77.213	Ornithorhynchus_anatinus
ENSACAG00000001676	R3HDM1	89	76.298	ENSOCUG00000017366	R3HDM1	98	75.220	Oryctolagus_cuniculus
ENSACAG00000001676	R3HDM1	89	46.592	ENSORLG00000004297	r3hdm1	99	46.965	Oryzias_latipes
ENSACAG00000001676	R3HDM1	89	46.555	ENSORLG00015017355	r3hdm1	99	46.927	Oryzias_latipes_hsok
ENSACAG00000001676	R3HDM1	100	76.842	ENSOGAG00000003136	R3HDM1	100	75.702	Otolemur_garnettii
ENSACAG00000001676	R3HDM1	100	78.257	ENSOARG00000010788	R3HDM1	100	77.201	Ovis_aries
ENSACAG00000001676	R3HDM1	100	76.507	ENSPPAG00000027858	R3HDM1	100	76.681	Pan_paniscus
ENSACAG00000001676	R3HDM1	100	77.719	ENSPPRG00000002626	R3HDM1	100	77.018	Panthera_pardus
ENSACAG00000001676	R3HDM1	100	77.719	ENSPTIG00000016581	R3HDM1	100	77.018	Panthera_tigris_altaica
ENSACAG00000001676	R3HDM1	100	76.681	ENSPTRG00000012494	R3HDM1	100	76.157	Pan_troglodytes
ENSACAG00000001676	R3HDM1	100	76.903	ENSPANG00000026448	R3HDM1	100	76.465	Papio_anubis
ENSACAG00000001676	R3HDM1	92	68.889	ENSPKIG00000004328	r3hdm1	96	69.059	Paramormyrops_kingsleyae
ENSACAG00000001676	R3HDM1	100	81.602	ENSPSIG00000012915	R3HDM1	100	81.074	Pelodiscus_sinensis
ENSACAG00000001676	R3HDM1	100	78.196	ENSPEMG00000015187	R3hdm1	100	77.846	Peromyscus_maniculatus_bairdii
ENSACAG00000001676	R3HDM1	88	41.457	ENSPMAG00000003369	-	99	42.938	Petromyzon_marinus
ENSACAG00000001676	R3HDM1	100	81.754	ENSPCIG00000002491	R3HDM1	100	85.049	Phascolarctos_cinereus
ENSACAG00000001676	R3HDM1	89	49.395	ENSPFOG00000015036	r3hdm1	99	48.833	Poecilia_formosa
ENSACAG00000001676	R3HDM1	80	47.609	ENSPLAG00000018042	r3hdm1	95	47.216	Poecilia_latipinna
ENSACAG00000001676	R3HDM1	80	48.308	ENSPMEG00000023947	r3hdm1	95	47.472	Poecilia_mexicana
ENSACAG00000001676	R3HDM1	89	48.661	ENSPREG00000007902	r3hdm1	88	61.758	Poecilia_reticulata
ENSACAG00000001676	R3HDM1	100	76.224	ENSPPYG00000012815	R3HDM1	100	75.699	Pongo_abelii
ENSACAG00000001676	R3HDM1	100	67.252	ENSPCAG00000006208	R3HDM1	100	66.374	Procavia_capensis
ENSACAG00000001676	R3HDM1	100	75.153	ENSPCOG00000012698	R3HDM1	100	74.541	Propithecus_coquereli
ENSACAG00000001676	R3HDM1	100	68.821	ENSPVAG00000006098	R3HDM1	100	68.297	Pteropus_vampyrus
ENSACAG00000001676	R3HDM1	76	76.282	ENSPNAG00000005436	R3HDM1	99	76.206	Pygocentrus_nattereri
ENSACAG00000001676	R3HDM1	93	63.466	ENSPNAG00000013952	r3hdm1	100	63.380	Pygocentrus_nattereri
ENSACAG00000001676	R3HDM1	64	38.658	ENSPNAG00000004162	arpp21	64	50.613	Pygocentrus_nattereri
ENSACAG00000001676	R3HDM1	100	76.357	ENSRNOG00000004099	R3hdm1	100	75.965	Rattus_norvegicus
ENSACAG00000001676	R3HDM1	100	74.498	ENSRBIG00000033317	R3HDM1	100	92.989	Rhinopithecus_bieti
ENSACAG00000001676	R3HDM1	100	75.612	ENSRROG00000034534	R3HDM1	100	76.049	Rhinopithecus_roxellana
ENSACAG00000001676	R3HDM1	100	76.728	ENSSBOG00000020389	R3HDM1	100	75.941	Saimiri_boliviensis_boliviensis
ENSACAG00000001676	R3HDM1	100	79.244	ENSSHAG00000016999	R3HDM1	100	78.892	Sarcophilus_harrisii
ENSACAG00000001676	R3HDM1	100	56.121	ENSSFOG00015019851	-	99	58.942	Scleropages_formosus
ENSACAG00000001676	R3HDM1	93	70.460	ENSSFOG00015014134	r3hdm1	100	70.388	Scleropages_formosus
ENSACAG00000001676	R3HDM1	99	42.467	ENSSMAG00000001669	r3hdm1	99	42.263	Scophthalmus_maximus
ENSACAG00000001676	R3HDM1	89	45.993	ENSSDUG00000010749	r3hdm1	99	46.697	Seriola_dumerili
ENSACAG00000001676	R3HDM1	99	45.250	ENSSLDG00000004499	r3hdm1	99	45.889	Seriola_lalandi_dorsalis
ENSACAG00000001676	R3HDM1	67	71.096	ENSSARG00000000352	-	64	78.333	Sorex_araneus
ENSACAG00000001676	R3HDM1	100	85.463	ENSSPUG00000004167	R3HDM1	100	84.934	Sphenodon_punctatus
ENSACAG00000001676	R3HDM1	89	47.738	ENSSPAG00000004648	r3hdm1	99	48.106	Stegastes_partitus
ENSACAG00000001676	R3HDM1	100	80.088	ENSSSCG00000015692	R3HDM1	100	79.825	Sus_scrofa
ENSACAG00000001676	R3HDM1	100	75.835	ENSTGUG00000011750	R3HDM1	100	75.132	Taeniopygia_guttata
ENSACAG00000001676	R3HDM1	80	47.480	ENSTRUG00000011654	r3hdm1	99	44.321	Takifugu_rubripes
ENSACAG00000001676	R3HDM1	88	45.472	ENSTNIG00000010362	r3hdm1	99	44.615	Tetraodon_nigroviridis
ENSACAG00000001676	R3HDM1	100	70.800	ENSTTRG00000003935	R3HDM1	100	71.466	Tursiops_truncatus
ENSACAG00000001676	R3HDM1	71	77.956	ENSUAMG00000024806	R3HDM1	94	83.301	Ursus_americanus
ENSACAG00000001676	R3HDM1	100	73.509	ENSUMAG00000005552	R3HDM1	100	76.355	Ursus_maritimus
ENSACAG00000001676	R3HDM1	93	74.651	ENSVPAG00000007333	R3HDM1	93	74.750	Vicugna_pacos
ENSACAG00000001676	R3HDM1	100	79.860	ENSVVUG00000006457	R3HDM1	100	79.685	Vulpes_vulpes
ENSACAG00000001676	R3HDM1	90	66.244	ENSXETG00000019330	r3hdm1	100	66.146	Xenopus_tropicalis
ENSACAG00000001676	R3HDM1	68	48.234	ENSXCOG00000017448	r3hdm1	94	47.789	Xiphophorus_couchianus
ENSACAG00000001676	R3HDM1	89	49.209	ENSXMAG00000007885	r3hdm1	99	48.926	Xiphophorus_maculatus