EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACAG00000001759 (Gene tree)
Gene ID
100564303
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Anolis_carolinensis
Status
putative
Strand
Minus strand
Length
18376 bases
Position
chr1:148474148-148492523
Accession
100564303
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACAP00000001878CPSF73-100_CPF11718.86.9e-5211
ENSACAP00000001878Beta-CaspPF10996.82.7e-3411
ENSACAP00000001878Lactamase_BPF00753.276.4e-1411
ENSACAP00000001878RMMBLPF07521.129.1e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACAT00000001924CPSF3-2014236XM_008117655ENSACAP00000001878636 (aa)XP_008115862G1KA18
Gene Model
Click here to download ENSACAG00000001759's gene model file
Pathways
Pathway IDPathway NameSource
acs03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000001759's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACAG00000001759CPSF36838.581ENSACAG00000013975INTS117338.581
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACAG00000001759CPSF39993.071ENSG00000119203CPSF39893.071Homo_sapiens
ENSACAG00000001759CPSF37296.703ENSAPOG00000012241CPSF38696.703Acanthochromis_polyacanthus
ENSACAG00000001759CPSF39982.808ENSAPOG00000022087cpsf39881.910Acanthochromis_polyacanthus
ENSACAG00000001759CPSF39992.598ENSAMEG00000008493CPSF39392.598Ailuropoda_melanoleuca
ENSACAG00000001759CPSF39984.945ENSACIG00000023663CPSF39984.945Amphilophus_citrinellus
ENSACAG00000001759CPSF39981.081ENSACIG00000009846cpsf39981.081Amphilophus_citrinellus
ENSACAG00000001759CPSF39982.965ENSAOCG00000022056cpsf38690.037Amphiprion_ocellaris
ENSACAG00000001759CPSF39985.197ENSAOCG00000010077CPSF39982.726Amphiprion_ocellaris
ENSACAG00000001759CPSF39983.123ENSAPEG00000019526cpsf39980.763Amphiprion_percula
ENSACAG00000001759CPSF39985.197ENSAPEG00000021167CPSF39982.233Amphiprion_percula
ENSACAG00000001759CPSF39981.417ENSATEG00000014525CPSF39181.417Anabas_testudineus
ENSACAG00000001759CPSF39982.808ENSATEG00000003959cpsf39982.035Anabas_testudineus
ENSACAG00000001759CPSF39993.701ENSAPLG00000006941CPSF39393.701Anas_platyrhynchos
ENSACAG00000001759CPSF310086.635ENSANAG00000031254CPSF39486.635Aotus_nancymaae
ENSACAG00000001759CPSF39984.786ENSACLG00000018846CPSF39984.786Astatotilapia_calliptera
ENSACAG00000001759CPSF39983.438ENSACLG00000014484cpsf39981.616Astatotilapia_calliptera
ENSACAG00000001759CPSF39985.512ENSAMXG00000004786cpsf39983.175Astyanax_mexicanus
ENSACAG00000001759CPSF39992.756ENSBTAG00000019735CPSF39392.756Bos_taurus
ENSACAG00000001759CPSF39159.729WBGene00013460cpsf-38359.729Caenorhabditis_elegans
ENSACAG00000001759CPSF39992.756ENSCJAG00000006276CPSF39392.756Callithrix_jacchus
ENSACAG00000001759CPSF39992.598ENSCAFG00000003375CPSF38892.598Canis_familiaris
ENSACAG00000001759CPSF39094.912ENSCAFG00020026799CPSF39294.912Canis_lupus_dingo
ENSACAG00000001759CPSF39992.756ENSCHIG00000013973CPSF39392.756Capra_hircus
ENSACAG00000001759CPSF39993.071ENSTSYG00000002967CPSF39393.071Carlito_syrichta
ENSACAG00000001759CPSF39992.126ENSCAPG00000013851CPSF39592.126Cavia_aperea
ENSACAG00000001759CPSF39992.126ENSCPOG00000011299CPSF39392.126Cavia_porcellus
ENSACAG00000001759CPSF39992.913ENSCCAG00000036730CPSF39492.913Cebus_capucinus
ENSACAG00000001759CPSF39990.566ENSCATG00000014770CPSF39197.368Cercocebus_atys
ENSACAG00000001759CPSF39992.126ENSCLAG00000002727CPSF39392.126Chinchilla_lanigera
ENSACAG00000001759CPSF39984.567ENSCSAG00000007125CPSF39284.567Chlorocebus_sabaeus
ENSACAG00000001759CPSF39066.842ENSCHOG00000000180CPSF38566.842Choloepus_hoffmanni
ENSACAG00000001759CPSF310093.239ENSCPBG00000014074CPSF39293.239Chrysemys_picta_bellii
ENSACAG00000001759CPSF310066.771ENSCING00000007214-9166.771Ciona_intestinalis
ENSACAG00000001759CPSF39981.260ENSCANG00000034435CPSF39281.260Colobus_angolensis_palliatus
ENSACAG00000001759CPSF39992.126ENSCGRG00001013134Cpsf39392.126Cricetulus_griseus_chok1gshd
ENSACAG00000001759CPSF39992.126ENSCGRG00000018319Cpsf39392.126Cricetulus_griseus_crigri
ENSACAG00000001759CPSF39984.434ENSCSEG00000002021CPSF39884.434Cynoglossus_semilaevis
ENSACAG00000001759CPSF39984.796ENSCVAG00000015067CPSF39284.796Cyprinodon_variegatus
ENSACAG00000001759CPSF35068.966ENSCVAG00000022039-9468.966Cyprinodon_variegatus
ENSACAG00000001759CPSF39986.321ENSDARG00000027649cpsf39286.321Danio_rerio
ENSACAG00000001759CPSF39991.195ENSDNOG00000008940CPSF38891.195Dasypus_novemcinctus
ENSACAG00000001759CPSF39594.020ENSDORG00000014263Cpsf39294.020Dipodomys_ordii
ENSACAG00000001759CPSF39965.300FBgn0261065Cpsf739165.300Drosophila_melanogaster
ENSACAG00000001759CPSF39583.223ENSETEG00000003893CPSF39283.223Echinops_telfairi
ENSACAG00000001759CPSF39977.029ENSEBUG00000009018cpsf39277.182Eptatretus_burgeri
ENSACAG00000001759CPSF39992.598ENSEASG00005003970CPSF39392.598Equus_asinus_asinus
ENSACAG00000001759CPSF39992.598ENSECAG00000019911CPSF38996.721Equus_caballus
ENSACAG00000001759CPSF39976.063ENSEEUG00000015422CPSF39376.063Erinaceus_europaeus
ENSACAG00000001759CPSF39985.647ENSELUG00000013775cpsf39983.491Esox_lucius
ENSACAG00000001759CPSF39992.756ENSFCAG00000007852CPSF39892.756Felis_catus
ENSACAG00000001759CPSF39994.016ENSFALG00000006572CPSF39894.016Ficedula_albicollis
ENSACAG00000001759CPSF39991.956ENSFDAG00000006317CPSF39291.956Fukomys_damarensis
ENSACAG00000001759CPSF39982.650ENSFHEG00000014774cpsf39282.650Fundulus_heteroclitus
ENSACAG00000001759CPSF36465.937ENSFHEG00000012186CPSF39965.937Fundulus_heteroclitus
ENSACAG00000001759CPSF39984.252ENSGMOG00000003157cpsf39284.252Gadus_morhua
ENSACAG00000001759CPSF39993.228ENSGALG00000016424CPSF39993.228Gallus_gallus
ENSACAG00000001759CPSF39985.400ENSGAFG00000008016CPSF39285.400Gambusia_affinis
ENSACAG00000001759CPSF39980.854ENSGAFG00000019449cpsf39980.854Gambusia_affinis
ENSACAG00000001759CPSF37491.239ENSGAGG00000025583CPSF39391.239Gopherus_agassizii
ENSACAG00000001759CPSF39993.071ENSGGOG00000001757CPSF39993.071Gorilla_gorilla
ENSACAG00000001759CPSF39983.438ENSHBUG00000001188cpsf39981.616Haplochromis_burtoni
ENSACAG00000001759CPSF36478.378ENSHBUG00000014332CPSF39978.378Haplochromis_burtoni
ENSACAG00000001759CPSF39991.969ENSHGLG00000000666CPSF39291.969Heterocephalus_glaber_female
ENSACAG00000001759CPSF39991.969ENSHGLG00100007765CPSF39291.969Heterocephalus_glaber_male
ENSACAG00000001759CPSF39982.677ENSHCOG00000007251cpsf39282.677Hippocampus_comes
ENSACAG00000001759CPSF39983.780ENSHCOG00000015957CPSF39183.780Hippocampus_comes
ENSACAG00000001759CPSF39984.252ENSIPUG00000023488cpsf39981.905Ictalurus_punctatus
ENSACAG00000001759CPSF39992.598ENSSTOG00000004476CPSF39392.598Ictidomys_tridecemlineatus
ENSACAG00000001759CPSF39991.654ENSJJAG00000023415Cpsf39391.654Jaculus_jaculus
ENSACAG00000001759CPSF39984.882ENSKMAG00000007317CPSF39284.882Kryptolebias_marmoratus
ENSACAG00000001759CPSF39982.334ENSKMAG00000002806cpsf39282.334Kryptolebias_marmoratus
ENSACAG00000001759CPSF35977.480ENSLBEG00000015018-9977.480Labrus_bergylta
ENSACAG00000001759CPSF39586.213ENSLBEG00000013492CPSF39186.213Labrus_bergylta
ENSACAG00000001759CPSF39977.129ENSLBEG00000020569cpsf38777.129Labrus_bergylta
ENSACAG00000001759CPSF39982.334ENSLACG00000008308CPSF39282.334Latimeria_chalumnae
ENSACAG00000001759CPSF39986.321ENSLOCG00000016823cpsf39286.321Lepisosteus_oculatus
ENSACAG00000001759CPSF39992.913ENSLAFG00000009467CPSF39392.913Loxodonta_africana
ENSACAG00000001759CPSF39992.913ENSMFAG00000001339CPSF39892.913Macaca_fascicularis
ENSACAG00000001759CPSF39992.913ENSMMUG00000018038CPSF39892.913Macaca_mulatta
ENSACAG00000001759CPSF39981.575ENSMNEG00000039447CPSF39281.575Macaca_nemestrina
ENSACAG00000001759CPSF39993.071ENSMLEG00000026825CPSF39393.071Mandrillus_leucophaeus
ENSACAG00000001759CPSF39982.650ENSMAMG00000003076cpsf39878.855Mastacembelus_armatus
ENSACAG00000001759CPSF39983.096ENSMAMG00000008835CPSF39983.096Mastacembelus_armatus
ENSACAG00000001759CPSF39983.438ENSMZEG00005014358cpsf39981.616Maylandia_zebra
ENSACAG00000001759CPSF39986.142ENSMZEG00005006258CPSF39984.786Maylandia_zebra
ENSACAG00000001759CPSF39993.071ENSMGAG00000013995CPSF39593.071Meleagris_gallopavo
ENSACAG00000001759CPSF35985.904ENSMAUG00000000166Cpsf39985.904Mesocricetus_auratus
ENSACAG00000001759CPSF39987.087ENSMICG00000002363CPSF39987.087Microcebus_murinus
ENSACAG00000001759CPSF39988.031ENSMOCG00000020067Cpsf39288.031Microtus_ochrogaster
ENSACAG00000001759CPSF37877.500ENSMMOG00000011923CPSF38477.500Mola_mola
ENSACAG00000001759CPSF39980.284ENSMMOG00000018212CPSF39680.284Mola_mola
ENSACAG00000001759CPSF39991.745ENSMODG00000014703CPSF39391.745Monodelphis_domestica
ENSACAG00000001759CPSF39981.435ENSMALG00000011474CPSF39981.435Monopterus_albus
ENSACAG00000001759CPSF39983.438ENSMALG00000016416cpsf39981.558Monopterus_albus
ENSACAG00000001759CPSF39991.811MGP_CAROLIEiJ_G0017640Cpsf39391.811Mus_caroli
ENSACAG00000001759CPSF39991.811ENSMUSG00000054309Cpsf39498.678Mus_musculus
ENSACAG00000001759CPSF39991.969MGP_PahariEiJ_G0029397Cpsf39391.969Mus_pahari
ENSACAG00000001759CPSF39991.811MGP_SPRETEiJ_G0018481Cpsf39391.811Mus_spretus
ENSACAG00000001759CPSF39992.902ENSMPUG00000013213CPSF39392.902Mustela_putorius_furo
ENSACAG00000001759CPSF39992.296ENSMLUG00000010636CPSF39392.296Myotis_lucifugus
ENSACAG00000001759CPSF39991.811ENSNGAG00000019836Cpsf39391.811Nannospalax_galili
ENSACAG00000001759CPSF39984.786ENSNBRG00000010525CPSF39984.786Neolamprologus_brichardi
ENSACAG00000001759CPSF39983.123ENSNBRG00000004770cpsf39981.300Neolamprologus_brichardi
ENSACAG00000001759CPSF39992.913ENSNLEG00000013359CPSF39892.913Nomascus_leucogenys
ENSACAG00000001759CPSF39961.417ENSMEUG00000013117-9361.732Notamacropus_eugenii
ENSACAG00000001759CPSF39983.438ENSOPRG00000008902CPSF39383.438Ochotona_princeps
ENSACAG00000001759CPSF39991.654ENSODEG00000003129CPSF39391.654Octodon_degus
ENSACAG00000001759CPSF39983.596ENSONIG00000018812cpsf39283.596Oreochromis_niloticus
ENSACAG00000001759CPSF38992.376ENSOANG00000008577CPSF39992.376Ornithorhynchus_anatinus
ENSACAG00000001759CPSF39992.598ENSOCUG00000003728CPSF39392.598Oryctolagus_cuniculus
ENSACAG00000001759CPSF39981.861ENSORLG00000018854cpsf39281.861Oryzias_latipes
ENSACAG00000001759CPSF39981.861ENSORLG00020013331cpsf39979.524Oryzias_latipes_hni
ENSACAG00000001759CPSF39981.861ENSORLG00015011017cpsf39979.841Oryzias_latipes_hsok
ENSACAG00000001759CPSF39981.861ENSOMEG00000010647cpsf38881.861Oryzias_melastigma
ENSACAG00000001759CPSF39982.362ENSOGAG00000001680CPSF39382.362Otolemur_garnettii
ENSACAG00000001759CPSF39992.756ENSOARG00000015073CPSF39392.756Ovis_aries
ENSACAG00000001759CPSF39993.071ENSPPAG00000042457CPSF39393.071Pan_paniscus
ENSACAG00000001759CPSF310091.981ENSPPRG00000016790CPSF39892.441Panthera_pardus
ENSACAG00000001759CPSF39992.126ENSPTIG00000003920CPSF39992.441Panthera_tigris_altaica
ENSACAG00000001759CPSF39993.071ENSPTRG00000011638CPSF39393.071Pan_troglodytes
ENSACAG00000001759CPSF39992.756ENSPANG00000016798CPSF39392.756Papio_anubis
ENSACAG00000001759CPSF39986.751ENSPKIG00000023646cpsf39886.751Paramormyrops_kingsleyae
ENSACAG00000001759CPSF39994.173ENSPSIG00000016144CPSF39394.173Pelodiscus_sinensis
ENSACAG00000001759CPSF38686.775ENSPMGG00000006141-9586.775Periophthalmus_magnuspinnatus
ENSACAG00000001759CPSF36475.676ENSPMGG00000015311CPSF39975.676Periophthalmus_magnuspinnatus
ENSACAG00000001759CPSF39991.811ENSPEMG00000017668Cpsf39392.126Peromyscus_maniculatus_bairdii
ENSACAG00000001759CPSF37689.775ENSPMAG00000004841cpsf39089.775Petromyzon_marinus
ENSACAG00000001759CPSF39992.126ENSPCIG00000009823CPSF39492.441Phascolarctos_cinereus
ENSACAG00000001759CPSF39982.205ENSPFOG00000015922cpsf39282.205Poecilia_formosa
ENSACAG00000001759CPSF39985.086ENSPFOG00000010418-9285.086Poecilia_formosa
ENSACAG00000001759CPSF36478.186ENSPLAG00000021300-9978.186Poecilia_latipinna
ENSACAG00000001759CPSF39982.205ENSPLAG00000000882cpsf39282.205Poecilia_latipinna
ENSACAG00000001759CPSF39982.362ENSPMEG00000018309cpsf39282.362Poecilia_mexicana
ENSACAG00000001759CPSF39980.794ENSPREG00000014875cpsf39980.794Poecilia_reticulata
ENSACAG00000001759CPSF39980.063ENSPREG00000004482CPSF39180.063Poecilia_reticulata
ENSACAG00000001759CPSF39988.189ENSPPYG00000012666CPSF39288.189Pongo_abelii
ENSACAG00000001759CPSF39561.462ENSPCAG00000015042CPSF39261.462Procavia_capensis
ENSACAG00000001759CPSF38790.558ENSPCOG00000023016CPSF38990.558Propithecus_coquereli
ENSACAG00000001759CPSF39992.744ENSPVAG00000005324CPSF39392.744Pteropus_vampyrus
ENSACAG00000001759CPSF38590.424ENSPNYG00000021047CPSF39190.424Pundamilia_nyererei
ENSACAG00000001759CPSF39983.438ENSPNYG00000004405cpsf39981.616Pundamilia_nyererei
ENSACAG00000001759CPSF39984.929ENSPNAG00000023060cpsf39983.386Pygocentrus_nattereri
ENSACAG00000001759CPSF39991.956ENSRNOG00000052418Cpsf39291.956Rattus_norvegicus
ENSACAG00000001759CPSF39988.661ENSRBIG00000041615CPSF39788.661Rhinopithecus_bieti
ENSACAG00000001759CPSF39993.071ENSRROG00000033792CPSF39393.071Rhinopithecus_roxellana
ENSACAG00000001759CPSF39340.115YLR277CYSH18940.115Saccharomyces_cerevisiae
ENSACAG00000001759CPSF39988.576ENSSBOG00000027263CPSF39288.576Saimiri_boliviensis_boliviensis
ENSACAG00000001759CPSF39992.598ENSSHAG00000007024CPSF39392.598Sarcophilus_harrisii
ENSACAG00000001759CPSF39987.224ENSSFOG00015002108cpsf39987.224Scleropages_formosus
ENSACAG00000001759CPSF39585.406ENSSMAG00000020534CPSF38885.406Scophthalmus_maximus
ENSACAG00000001759CPSF39983.123ENSSDUG00000002828cpsf38983.123Seriola_dumerili
ENSACAG00000001759CPSF39985.512ENSSDUG00000018498CPSF39983.861Seriola_dumerili
ENSACAG00000001759CPSF39985.512ENSSLDG00000005234CPSF39983.518Seriola_lalandi_dorsalis
ENSACAG00000001759CPSF39983.281ENSSLDG00000008469cpsf38489.852Seriola_lalandi_dorsalis
ENSACAG00000001759CPSF39974.961ENSSARG00000005186CPSF39374.961Sorex_araneus
ENSACAG00000001759CPSF39990.454ENSSPUG00000015525CPSF39390.454Sphenodon_punctatus
ENSACAG00000001759CPSF39983.281ENSSPAG00000018579cpsf39283.281Stegastes_partitus
ENSACAG00000001759CPSF39984.882ENSSPAG00000002906CPSF39983.043Stegastes_partitus
ENSACAG00000001759CPSF39992.598ENSSSCG00000020799CPSF39991.228Sus_scrofa
ENSACAG00000001759CPSF39993.858ENSTGUG00000013016CPSF39393.858Taeniopygia_guttata
ENSACAG00000001759CPSF39982.390ENSTRUG00000007030cpsf39082.390Takifugu_rubripes
ENSACAG00000001759CPSF36471.499ENSTRUG00000013905CPSF39971.499Takifugu_rubripes
ENSACAG00000001759CPSF38492.405ENSTBEG00000002707CPSF37792.405Tupaia_belangeri
ENSACAG00000001759CPSF38776.344ENSTTRG00000000861CPSF38076.344Tursiops_truncatus
ENSACAG00000001759CPSF39692.659ENSUAMG00000007535CPSF38892.659Ursus_americanus
ENSACAG00000001759CPSF39992.598ENSUMAG00000003676CPSF39892.598Ursus_maritimus
ENSACAG00000001759CPSF39592.027ENSVPAG00000008041CPSF39592.027Vicugna_pacos
ENSACAG00000001759CPSF39992.598ENSVVUG00000002194CPSF39392.598Vulpes_vulpes
ENSACAG00000001759CPSF39988.801ENSXETG00000008263cpsf39188.801Xenopus_tropicalis
ENSACAG00000001759CPSF35876.267ENSXCOG00000000957-8776.267Xiphophorus_couchianus
ENSACAG00000001759CPSF39982.261ENSXCOG00000019695cpsf39282.261Xiphophorus_couchianus
ENSACAG00000001759CPSF39982.205ENSXMAG00000009784cpsf39882.205Xiphophorus_maculatus
ENSACAG00000001759CPSF39985.243ENSXMAG00000027291CPSF39285.243Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us