EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSACAG00000001866 (Gene tree)
Gene ID: 103279484
Gene Symbol: -
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 51808 bases
Position: chr1:124468477-124520284
Accession: 100560106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000001800	MMR_HSR1	PF01926.23	9.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000001844	-	618	XM_008114793	ENSACAP00000001800	205 (aa)	XP_008113000	G1K9Y7
ENSACAT00000029353	-	774	XM_008114810	ENSACAP00000021935	257 (aa)	XP_008113017	R4G9M9

Gene Model

Click here to download ENSACAG00000001866's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs00511	Other glycan degradation	KEGG
acs04142	Lysosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000001866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000001866	-	95	37.186	ENSACAG00000015304	-	90	37.186
ENSACAG00000001866	-	67	30.714	ENSACAG00000006487	-	70	30.714
ENSACAG00000001866	-	78	47.500	ENSACAG00000028377	-	78	47.500
ENSACAG00000001866	-	96	45.813	ENSACAG00000016810	RAB3D	88	45.813
ENSACAG00000001866	-	80	45.238	ENSACAG00000002227	RAB33B	75	45.238
ENSACAG00000001866	-	75	51.299	ENSACAG00000028613	-	72	51.299
ENSACAG00000001866	-	85	30.114	ENSACAG00000014045	RAB20	73	30.114
ENSACAG00000001866	-	80	37.576	ENSACAG00000016948	-	95	35.912
ENSACAG00000001866	-	80	36.527	ENSACAG00000003841	MRAS	80	36.527
ENSACAG00000001866	-	80	50.909	ENSACAG00000009008	RAB15	77	50.909
ENSACAG00000001866	-	57	32.203	ENSACAG00000012512	ARL8B	61	32.203
ENSACAG00000001866	-	89	48.087	ENSACAG00000005694	RAB2A	98	44.712
ENSACAG00000001866	-	95	43.814	ENSACAG00000000017	RAB5A	90	43.814
ENSACAG00000001866	-	80	39.024	ENSACAG00000003090	NRAS	84	39.024
ENSACAG00000001866	-	74	31.579	ENSACAG00000012369	RRAS2	80	32.317
ENSACAG00000001866	-	80	51.220	ENSACAG00000001098	RAB30	81	51.220
ENSACAG00000001866	-	83	50.000	ENSACAG00000003034	RAB2B	81	50.000
ENSACAG00000001866	-	82	45.402	ENSACAG00000008849	RAB33A	80	45.402
ENSACAG00000001866	-	71	34.932	ENSACAG00000006656	RAB23	69	33.333
ENSACAG00000001866	-	95	38.144	ENSACAG00000014624	RAB22A	97	38.144
ENSACAG00000001866	-	80	38.788	ENSACAG00000017404	-	88	38.788
ENSACAG00000001866	-	78	39.264	ENSACAG00000005993	RAB7A	79	39.264
ENSACAG00000001866	-	95	45.178	ENSACAG00000005463	-	95	45.178
ENSACAG00000001866	-	94	33.000	ENSACAG00000012345	-	97	33.000
ENSACAG00000001866	-	73	38.926	ENSACAG00000000418	-	82	38.926
ENSACAG00000001866	-	83	48.256	ENSACAG00000003360	RAB12	67	48.256
ENSACAG00000001866	-	96	43.204	ENSACAG00000008285	RAB14	96	43.204
ENSACAG00000001866	-	94	35.751	ENSACAG00000016658	-	99	35.751
ENSACAG00000001866	-	96	46.829	ENSACAG00000004479	RAB11A	94	46.829
ENSACAG00000001866	-	76	40.625	ENSACAG00000014318	RAB9B	79	40.625
ENSACAG00000001866	-	99	53.465	ENSACAG00000003643	RAB35	100	53.465
ENSACAG00000001866	-	57	31.933	ENSACAG00000013615	ARL4A	59	31.933
ENSACAG00000001866	-	57	33.898	ENSACAG00000004202	ARL8A	61	33.898
ENSACAG00000001866	-	74	31.818	ENSACAG00000008622	DIRAS1	83	31.928
ENSACAG00000001866	-	80	35.758	ENSACAG00000011260	RAP2B	94	36.158
ENSACAG00000001866	-	96	37.000	ENSACAG00000004554	RAB17	89	37.000
ENSACAG00000001866	-	95	43.299	ENSACAG00000005380	RAB5B	90	43.299
ENSACAG00000001866	-	80	40.491	ENSACAG00000009389	-	98	40.491
ENSACAG00000001866	-	84	35.593	ENSACAG00000014920	HRAS	93	35.593
ENSACAG00000001866	-	65	97.744	ENSACAG00000009125	RAB1B	94	97.744
ENSACAG00000001866	-	76	37.736	ENSACAG00000001712	RAB9A	79	37.736