EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000002029 (Gene tree)
Gene ID: 100556831
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 30548 bases
Position: chr4:85651506-85682053
Accession: 100556831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000002052	RRM_1	PF00076.22	1.4e-16	1	2
ENSACAP00000002052	RRM_1	PF00076.22	1.4e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000002106	RNPC3-201	2031	XM_008109133	ENSACAP00000002052	506 (aa)	XP_008107340	G1KAA4

Gene Model

Click here to download ENSACAG00000002029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000002029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000002029	RNPC3	99	67.698	ENSG00000185946	RNPC3	100	67.568	Homo_sapiens
ENSACAG00000002029	RNPC3	96	54.949	ENSAPOG00000017371	rnpc3	96	56.701	Acanthochromis_polyacanthus
ENSACAG00000002029	RNPC3	97	68.379	ENSAMEG00000001694	RNPC3	96	68.400	Ailuropoda_melanoleuca
ENSACAG00000002029	RNPC3	96	51.786	ENSACIG00000021043	rnpc3	96	53.550	Amphilophus_citrinellus
ENSACAG00000002029	RNPC3	96	53.386	ENSAOCG00000014052	rnpc3	94	55.081	Amphiprion_ocellaris
ENSACAG00000002029	RNPC3	96	53.187	ENSAPEG00000008739	rnpc3	94	54.878	Amphiprion_percula
ENSACAG00000002029	RNPC3	98	52.015	ENSATEG00000021263	rnpc3	98	53.725	Anabas_testudineus
ENSACAG00000002029	RNPC3	88	70.953	ENSAPLG00000015605	RNPC3	98	75.901	Anas_platyrhynchos
ENSACAG00000002029	RNPC3	96	68.474	ENSANAG00000019950	RNPC3	95	67.821	Aotus_nancymaae
ENSACAG00000002029	RNPC3	96	53.484	ENSACLG00000014702	rnpc3	95	55.346	Astatotilapia_calliptera
ENSACAG00000002029	RNPC3	96	54.509	ENSAMXG00000033372	rnpc3	96	54.806	Astyanax_mexicanus
ENSACAG00000002029	RNPC3	96	68.675	ENSBTAG00000019091	RNPC3	95	67.886	Bos_taurus
ENSACAG00000002029	RNPC3	96	68.008	ENSCJAG00000035686	RNPC3	95	67.755	Callithrix_jacchus
ENSACAG00000002029	RNPC3	97	67.396	ENSCAFG00000019972	RNPC3	95	67.276	Canis_familiaris
ENSACAG00000002029	RNPC3	97	67.594	ENSCAFG00020011300	RNPC3	95	67.480	Canis_lupus_dingo
ENSACAG00000002029	RNPC3	96	69.076	ENSCHIG00000020361	RNPC3	95	68.089	Capra_hircus
ENSACAG00000002029	RNPC3	99	66.474	ENSTSYG00000030256	RNPC3	99	65.887	Carlito_syrichta
ENSACAG00000002029	RNPC3	84	61.149	ENSCAPG00000013600	RNPC3	97	60.373	Cavia_aperea
ENSACAG00000002029	RNPC3	99	67.191	ENSCPOG00000031638	RNPC3	95	67.276	Cavia_porcellus
ENSACAG00000002029	RNPC3	96	69.076	ENSCCAG00000024301	RNPC3	95	68.432	Cebus_capucinus
ENSACAG00000002029	RNPC3	99	67.829	ENSCATG00000002086	RNPC3	98	67.255	Cercocebus_atys
ENSACAG00000002029	RNPC3	81	58.907	ENSCATG00000035930	-	94	52.881	Cercocebus_atys
ENSACAG00000002029	RNPC3	98	66.601	ENSCLAG00000005169	RNPC3	95	67.210	Chinchilla_lanigera
ENSACAG00000002029	RNPC3	99	67.829	ENSCSAG00000001519	RNPC3	98	67.255	Chlorocebus_sabaeus
ENSACAG00000002029	RNPC3	99	76.311	ENSCPBG00000028311	RNPC3	99	76.228	Chrysemys_picta_bellii
ENSACAG00000002029	RNPC3	93	38.877	ENSCING00000021276	-	98	39.873	Ciona_intestinalis
ENSACAG00000002029	RNPC3	93	38.333	ENSCSAVG00000002800	-	99	39.623	Ciona_savignyi
ENSACAG00000002029	RNPC3	99	67.248	ENSCANG00000031444	RNPC3	98	66.667	Colobus_angolensis_palliatus
ENSACAG00000002029	RNPC3	96	67.530	ENSCGRG00001019276	Rnpc3	95	67.273	Cricetulus_griseus_chok1gshd
ENSACAG00000002029	RNPC3	88	66.740	ENSCGRG00000000053	Rnpc3	99	66.444	Cricetulus_griseus_crigri
ENSACAG00000002029	RNPC3	96	52.352	ENSCSEG00000013475	rnpc3	97	54.397	Cynoglossus_semilaevis
ENSACAG00000002029	RNPC3	96	54.851	ENSCVAG00000002645	rnpc3	96	55.263	Cyprinodon_variegatus
ENSACAG00000002029	RNPC3	95	53.908	ENSDARG00000011247	rnpc3	95	56.823	Danio_rerio
ENSACAG00000002029	RNPC3	96	68.327	ENSDNOG00000044555	-	95	68.089	Dasypus_novemcinctus
ENSACAG00000002029	RNPC3	96	68.327	ENSDNOG00000047498	-	95	68.089	Dasypus_novemcinctus
ENSACAG00000002029	RNPC3	96	68.548	ENSDORG00000027343	Rnpc3	95	67.755	Dipodomys_ordii
ENSACAG00000002029	RNPC3	97	48.356	ENSEBUG00000002068	rnpc3	98	47.461	Eptatretus_burgeri
ENSACAG00000002029	RNPC3	97	68.327	ENSEASG00005015957	RNPC3	96	67.540	Equus_asinus_asinus
ENSACAG00000002029	RNPC3	97	68.327	ENSECAG00000021148	RNPC3	95	68.228	Equus_caballus
ENSACAG00000002029	RNPC3	97	53.876	ENSELUG00000002264	rnpc3	96	55.050	Esox_lucius
ENSACAG00000002029	RNPC3	97	68.047	ENSFCAG00000024312	RNPC3	95	67.944	Felis_catus
ENSACAG00000002029	RNPC3	88	74.667	ENSFALG00000002580	RNPC3	98	76.126	Ficedula_albicollis
ENSACAG00000002029	RNPC3	96	69.277	ENSFDAG00000019948	RNPC3	95	68.496	Fukomys_damarensis
ENSACAG00000002029	RNPC3	98	51.509	ENSFHEG00000020647	rnpc3	97	51.125	Fundulus_heteroclitus
ENSACAG00000002029	RNPC3	96	53.971	ENSGMOG00000019213	rnpc3	95	55.372	Gadus_morhua
ENSACAG00000002029	RNPC3	96	74.542	ENSGALG00000005162	RNPC3	93	73.633	Gallus_gallus
ENSACAG00000002029	RNPC3	96	51.984	ENSGAFG00000017236	rnpc3	96	54.251	Gambusia_affinis
ENSACAG00000002029	RNPC3	96	54.141	ENSGACG00000002048	rnpc3	95	53.737	Gasterosteus_aculeatus
ENSACAG00000002029	RNPC3	96	78.455	ENSGAGG00000008438	RNPC3	99	76.172	Gopherus_agassizii
ENSACAG00000002029	RNPC3	96	58.727	ENSGGOG00000026201	-	94	58.542	Gorilla_gorilla
ENSACAG00000002029	RNPC3	78	66.667	ENSHBUG00000015966	rnpc3	81	66.667	Haplochromis_burtoni
ENSACAG00000002029	RNPC3	96	68.675	ENSHGLG00000001708	RNPC3	95	67.886	Heterocephalus_glaber_female
ENSACAG00000002029	RNPC3	96	68.675	ENSHGLG00100003005	RNPC3	95	67.886	Heterocephalus_glaber_male
ENSACAG00000002029	RNPC3	96	52.834	ENSHCOG00000017135	rnpc3	96	54.227	Hippocampus_comes
ENSACAG00000002029	RNPC3	94	57.113	ENSIPUG00000002916	rnpc3	96	57.113	Ictalurus_punctatus
ENSACAG00000002029	RNPC3	99	66.926	ENSSTOG00000025020	RNPC3	97	66.468	Ictidomys_tridecemlineatus
ENSACAG00000002029	RNPC3	95	66.870	ENSJJAG00000010203	Rnpc3	97	65.669	Jaculus_jaculus
ENSACAG00000002029	RNPC3	96	53.722	ENSKMAG00000017358	rnpc3	95	55.072	Kryptolebias_marmoratus
ENSACAG00000002029	RNPC3	96	53.507	ENSLBEG00000024901	rnpc3	94	54.825	Labrus_bergylta
ENSACAG00000002029	RNPC3	99	63.953	ENSLACG00000005720	RNPC3	92	64.271	Latimeria_chalumnae
ENSACAG00000002029	RNPC3	97	60.643	ENSLOCG00000007986	rnpc3	96	60.986	Lepisosteus_oculatus
ENSACAG00000002029	RNPC3	96	67.400	ENSLAFG00000032342	RNPC3	99	65.049	Loxodonta_africana
ENSACAG00000002029	RNPC3	99	68.023	ENSMFAG00000002004	RNPC3	98	67.451	Macaca_fascicularis
ENSACAG00000002029	RNPC3	96	53.689	ENSMFAG00000002917	-	94	53.027	Macaca_fascicularis
ENSACAG00000002029	RNPC3	99	67.636	ENSMMUG00000018039	RNPC3	98	67.059	Macaca_mulatta
ENSACAG00000002029	RNPC3	78	69.903	ENSMMUG00000002098	-	84	69.347	Macaca_mulatta
ENSACAG00000002029	RNPC3	76	58.656	ENSMNEG00000029209	-	85	59.948	Macaca_nemestrina
ENSACAG00000002029	RNPC3	99	63.953	ENSMNEG00000033950	RNPC3	98	63.333	Macaca_nemestrina
ENSACAG00000002029	RNPC3	76	62.016	ENSMLEG00000034644	-	87	59.420	Mandrillus_leucophaeus
ENSACAG00000002029	RNPC3	99	67.829	ENSMLEG00000033628	RNPC3	98	67.255	Mandrillus_leucophaeus
ENSACAG00000002029	RNPC3	95	51.619	ENSMAMG00000007496	rnpc3	95	51.004	Mastacembelus_armatus
ENSACAG00000002029	RNPC3	96	51.677	ENSMZEG00005020233	rnpc3	96	53.629	Maylandia_zebra
ENSACAG00000002029	RNPC3	88	73.246	ENSMGAG00000006381	RNPC3	98	75.778	Meleagris_gallopavo
ENSACAG00000002029	RNPC3	96	68.725	ENSMAUG00000001358	Rnpc3	95	69.293	Mesocricetus_auratus
ENSACAG00000002029	RNPC3	96	68.600	ENSMICG00000029591	RNPC3	95	68.219	Microcebus_murinus
ENSACAG00000002029	RNPC3	96	68.862	ENSMOCG00000013423	Rnpc3	95	68.485	Microtus_ochrogaster
ENSACAG00000002029	RNPC3	96	52.263	ENSMMOG00000005309	rnpc3	95	53.571	Mola_mola
ENSACAG00000002029	RNPC3	96	70.287	ENSMODG00000002946	RNPC3	94	70.270	Monodelphis_domestica
ENSACAG00000002029	RNPC3	97	51.081	ENSMALG00000015471	rnpc3	96	52.716	Monopterus_albus
ENSACAG00000002029	RNPC3	96	67.800	MGP_CAROLIEiJ_G0025555	Rnpc3	96	68.016	Mus_caroli
ENSACAG00000002029	RNPC3	96	68.000	ENSMUSG00000027981	Rnpc3	98	67.174	Mus_musculus
ENSACAG00000002029	RNPC3	96	67.400	MGP_PahariEiJ_G0027001	Rnpc3	96	66.802	Mus_pahari
ENSACAG00000002029	RNPC3	96	68.200	MGP_SPRETEiJ_G0026505	Rnpc3	96	67.409	Mus_spretus
ENSACAG00000002029	RNPC3	97	68.119	ENSMPUG00000007349	RNPC3	95	68.293	Mustela_putorius_furo
ENSACAG00000002029	RNPC3	96	68.600	ENSMLUG00000028743	RNPC3	95	68.219	Myotis_lucifugus
ENSACAG00000002029	RNPC3	99	66.471	ENSNGAG00000010939	Rnpc3	98	65.476	Nannospalax_galili
ENSACAG00000002029	RNPC3	96	53.279	ENSNBRG00000012196	rnpc3	92	55.136	Neolamprologus_brichardi
ENSACAG00000002029	RNPC3	99	67.505	ENSNLEG00000012013	RNPC3	98	66.863	Nomascus_leucogenys
ENSACAG00000002029	RNPC3	96	68.072	ENSODEG00000007612	RNPC3	95	67.683	Octodon_degus
ENSACAG00000002029	RNPC3	95	55.397	ENSONIG00000004770	rnpc3	99	56.818	Oreochromis_niloticus
ENSACAG00000002029	RNPC3	90	71.520	ENSOANG00000008220	RNPC3	98	70.933	Ornithorhynchus_anatinus
ENSACAG00000002029	RNPC3	99	66.473	ENSOCUG00000004016	RNPC3	95	67.073	Oryctolagus_cuniculus
ENSACAG00000002029	RNPC3	96	54.379	ENSORLG00000005694	rnpc3	95	55.000	Oryzias_latipes
ENSACAG00000002029	RNPC3	96	54.786	ENSORLG00020005513	rnpc3	95	55.417	Oryzias_latipes_hni
ENSACAG00000002029	RNPC3	96	54.582	ENSORLG00015002179	rnpc3	95	55.208	Oryzias_latipes_hsok
ENSACAG00000002029	RNPC3	96	54.472	ENSOMEG00000017737	rnpc3	95	54.886	Oryzias_melastigma
ENSACAG00000002029	RNPC3	96	69.168	ENSOGAG00000026182	RNPC3	99	66.082	Otolemur_garnettii
ENSACAG00000002029	RNPC3	96	69.076	ENSOARG00000018719	RNPC3	95	68.089	Ovis_aries
ENSACAG00000002029	RNPC3	96	60.041	ENSPPAG00000030278	-	94	59.875	Pan_paniscus
ENSACAG00000002029	RNPC3	99	67.568	ENSPPAG00000037459	RNPC3	98	67.710	Pan_paniscus
ENSACAG00000002029	RNPC3	97	68.047	ENSPPRG00000020246	RNPC3	95	67.944	Panthera_pardus
ENSACAG00000002029	RNPC3	97	68.047	ENSPTIG00000009887	RNPC3	97	67.944	Panthera_tigris_altaica
ENSACAG00000002029	RNPC3	94	59.375	ENSPTRG00000044227	-	94	58.985	Pan_troglodytes
ENSACAG00000002029	RNPC3	99	67.505	ENSPTRG00000033902	RNPC3	98	66.863	Pan_troglodytes
ENSACAG00000002029	RNPC3	99	67.636	ENSPANG00000012137	RNPC3	98	67.059	Papio_anubis
ENSACAG00000002029	RNPC3	96	57.755	ENSPANG00000029957	-	95	56.757	Papio_anubis
ENSACAG00000002029	RNPC3	94	55.236	ENSPKIG00000008828	rnpc3	95	57.700	Paramormyrops_kingsleyae
ENSACAG00000002029	RNPC3	63	74.924	ENSPSIG00000007396	RNPC3	98	77.259	Pelodiscus_sinensis
ENSACAG00000002029	RNPC3	93	52.965	ENSPMGG00000011742	rnpc3	95	53.374	Periophthalmus_magnuspinnatus
ENSACAG00000002029	RNPC3	88	66.958	ENSPEMG00000020112	Rnpc3	99	66.297	Peromyscus_maniculatus_bairdii
ENSACAG00000002029	RNPC3	96	44.466	ENSPMAG00000003778	rnpc3	95	45.545	Petromyzon_marinus
ENSACAG00000002029	RNPC3	96	70.697	ENSPCIG00000004415	-	94	70.124	Phascolarctos_cinereus
ENSACAG00000002029	RNPC3	96	52.000	ENSPFOG00000009895	rnpc3	95	54.192	Poecilia_formosa
ENSACAG00000002029	RNPC3	96	52.400	ENSPLAG00000012023	rnpc3	95	54.601	Poecilia_latipinna
ENSACAG00000002029	RNPC3	96	52.200	ENSPMEG00000003663	rnpc3	95	54.397	Poecilia_mexicana
ENSACAG00000002029	RNPC3	96	51.904	ENSPREG00000010206	rnpc3	96	54.192	Poecilia_reticulata
ENSACAG00000002029	RNPC3	83	61.609	ENSPPYG00000001102	RNPC3	99	60.920	Pongo_abelii
ENSACAG00000002029	RNPC3	96	53.279	ENSPNYG00000020603	rnpc3	95	55.136	Pundamilia_nyererei
ENSACAG00000002029	RNPC3	96	53.119	ENSPNAG00000000524	rnpc3	88	55.236	Pygocentrus_nattereri
ENSACAG00000002029	RNPC3	96	67.335	ENSRNOG00000017310	Rnpc3	95	67.276	Rattus_norvegicus
ENSACAG00000002029	RNPC3	99	62.863	ENSRBIG00000043897	RNPC3	98	62.231	Rhinopithecus_bieti
ENSACAG00000002029	RNPC3	99	67.636	ENSRROG00000032334	RNPC3	98	67.059	Rhinopithecus_roxellana
ENSACAG00000002029	RNPC3	96	68.826	ENSSBOG00000024473	RNPC3	94	68.172	Saimiri_boliviensis_boliviensis
ENSACAG00000002029	RNPC3	96	69.168	ENSSHAG00000011859	RNPC3	94	68.930	Sarcophilus_harrisii
ENSACAG00000002029	RNPC3	96	58.717	ENSSFOG00015013055	rnpc3	98	59.267	Scleropages_formosus
ENSACAG00000002029	RNPC3	97	52.953	ENSSMAG00000020346	rnpc3	96	54.418	Scophthalmus_maximus
ENSACAG00000002029	RNPC3	96	53.571	ENSSDUG00000006600	rnpc3	96	55.263	Seriola_dumerili
ENSACAG00000002029	RNPC3	96	53.770	ENSSLDG00000007979	rnpc3	96	55.466	Seriola_lalandi_dorsalis
ENSACAG00000002029	RNPC3	97	67.814	ENSSPUG00000003872	-	91	71.014	Sphenodon_punctatus
ENSACAG00000002029	RNPC3	94	74.636	ENSSPUG00000008539	-	93	78.512	Sphenodon_punctatus
ENSACAG00000002029	RNPC3	96	54.472	ENSSPAG00000005633	rnpc3	95	55.509	Stegastes_partitus
ENSACAG00000002029	RNPC3	97	68.191	ENSSSCG00000037254	RNPC3	96	68.813	Sus_scrofa
ENSACAG00000002029	RNPC3	88	73.884	ENSTGUG00000004795	-	98	73.529	Taeniopygia_guttata
ENSACAG00000002029	RNPC3	96	54.545	ENSTNIG00000018963	rnpc3	96	54.825	Tetraodon_nigroviridis
ENSACAG00000002029	RNPC3	97	68.515	ENSUMAG00000007775	RNPC3	98	67.735	Ursus_maritimus
ENSACAG00000002029	RNPC3	97	67.594	ENSVVUG00000000331	RNPC3	95	67.480	Vulpes_vulpes
ENSACAG00000002029	RNPC3	95	51.837	ENSXETG00000025027	rnpc3	95	49.901	Xenopus_tropicalis
ENSACAG00000002029	RNPC3	96	53.892	ENSXCOG00000005013	rnpc3	96	54.286	Xiphophorus_couchianus
ENSACAG00000002029	RNPC3	96	51.697	ENSXMAG00000006495	rnpc3	96	54.175	Xiphophorus_maculatus