EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000002053 (Gene tree)
Gene ID: 100565606
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein-associated protein B'
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 10232 bases
Position: chrGL343820.1:155984-166215
Accession: 100565606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000002014	LSM	PF01423.22	6.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000002062	SNRPB-201	5478	XM_008123096	ENSACAP00000002014	232 (aa)	XP_008121303	H9G5X5

Gene Model

Click here to download ENSACAG00000002053's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000002053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000002053	SNRPB	92	95.305	ENSG00000125835	SNRPB	92	95.305	Homo_sapiens
ENSACAG00000002053	SNRPB	75	93.064	ENSAPOG00000019606	snrpb	54	95.625	Acanthochromis_polyacanthus
ENSACAG00000002053	SNRPB	92	95.305	ENSAMEG00000011353	SNRPB	88	95.305	Ailuropoda_melanoleuca
ENSACAG00000002053	SNRPB	75	92.486	ENSACIG00000014480	snrpb	70	95.625	Amphilophus_citrinellus
ENSACAG00000002053	SNRPB	75	93.064	ENSAOCG00000006876	snrpb	66	95.625	Amphiprion_ocellaris
ENSACAG00000002053	SNRPB	75	93.064	ENSAPEG00000021585	snrpb	68	95.625	Amphiprion_percula
ENSACAG00000002053	SNRPB	75	92.486	ENSATEG00000009836	snrpb	66	95.000	Anabas_testudineus
ENSACAG00000002053	SNRPB	92	95.305	ENSANAG00000024443	-	92	95.305	Aotus_nancymaae
ENSACAG00000002053	SNRPB	96	87.892	ENSANAG00000036271	-	73	88.398	Aotus_nancymaae
ENSACAG00000002053	SNRPB	75	93.064	ENSACLG00000014707	snrpb	66	95.625	Astatotilapia_calliptera
ENSACAG00000002053	SNRPB	69	93.750	ENSAMXG00000029434	snrpb	67	95.000	Astyanax_mexicanus
ENSACAG00000002053	SNRPB	92	94.836	ENSBTAG00000001038	SNRPB	92	94.836	Bos_taurus
ENSACAG00000002053	SNRPB	92	95.305	ENSCJAG00000020971	-	92	95.305	Callithrix_jacchus
ENSACAG00000002053	SNRPB	89	86.893	ENSCJAG00000023097	-	75	87.293	Callithrix_jacchus
ENSACAG00000002053	SNRPB	92	95.305	ENSCAFG00000006693	-	92	95.305	Canis_familiaris
ENSACAG00000002053	SNRPB	78	85.635	ENSCAFG00000031109	-	75	82.320	Canis_familiaris
ENSACAG00000002053	SNRPB	92	95.305	ENSCAFG00020016981	-	89	95.305	Canis_lupus_dingo
ENSACAG00000002053	SNRPB	92	94.836	ENSCHIG00000025449	-	92	94.836	Capra_hircus
ENSACAG00000002053	SNRPB	94	72.811	ENSTSYG00000032303	-	51	78.358	Carlito_syrichta
ENSACAG00000002053	SNRPB	92	95.305	ENSTSYG00000014498	-	92	95.305	Carlito_syrichta
ENSACAG00000002053	SNRPB	92	95.305	ENSCAPG00000012669	SNRPB	93	95.305	Cavia_aperea
ENSACAG00000002053	SNRPB	92	95.305	ENSCPOG00000039408	SNRPB	92	95.305	Cavia_porcellus
ENSACAG00000002053	SNRPB	52	83.333	ENSCCAG00000035140	-	77	81.818	Cebus_capucinus
ENSACAG00000002053	SNRPB	92	95.305	ENSCCAG00000026002	SNRPB	92	95.305	Cebus_capucinus
ENSACAG00000002053	SNRPB	92	95.305	ENSCATG00000030230	SNRPB	92	95.305	Cercocebus_atys
ENSACAG00000002053	SNRPB	92	95.305	ENSCLAG00000012442	SNRPB	90	95.305	Chinchilla_lanigera
ENSACAG00000002053	SNRPB	92	95.305	ENSCSAG00000010840	SNRPB	92	95.305	Chlorocebus_sabaeus
ENSACAG00000002053	SNRPB	100	98.276	ENSCPBG00000026801	SNRPB	97	98.276	Chrysemys_picta_bellii
ENSACAG00000002053	SNRPB	92	95.305	ENSCANG00000019461	SNRPB	92	95.305	Colobus_angolensis_palliatus
ENSACAG00000002053	SNRPB	92	95.305	ENSCGRG00001023046	Snrpb	92	95.305	Cricetulus_griseus_chok1gshd
ENSACAG00000002053	SNRPB	92	95.305	ENSCGRG00000010423	Snrpb	95	95.305	Cricetulus_griseus_crigri
ENSACAG00000002053	SNRPB	75	93.103	ENSCSEG00000020328	snrpb	66	95.625	Cynoglossus_semilaevis
ENSACAG00000002053	SNRPB	69	94.375	ENSDARG00000011125	snrpb	66	95.625	Danio_rerio
ENSACAG00000002053	SNRPB	92	95.305	ENSDNOG00000015545	-	89	95.305	Dasypus_novemcinctus
ENSACAG00000002053	SNRPB	92	91.080	ENSDNOG00000007896	-	88	91.080	Dasypus_novemcinctus
ENSACAG00000002053	SNRPB	92	94.836	ENSDORG00000029558	Snrpb	93	94.836	Dipodomys_ordii
ENSACAG00000002053	SNRPB	61	70.213	FBgn0262601	SmB	70	70.213	Drosophila_melanogaster
ENSACAG00000002053	SNRPB	69	74.375	ENSETEG00000006830	SNRPB	70	74.375	Echinops_telfairi
ENSACAG00000002053	SNRPB	75	80.337	ENSEBUG00000007467	SNRPB	59	89.362	Eptatretus_burgeri
ENSACAG00000002053	SNRPB	92	94.836	ENSEASG00005012991	SNRPB	92	94.836	Equus_asinus_asinus
ENSACAG00000002053	SNRPB	92	95.305	ENSECAG00000011944	SNRPB	93	95.305	Equus_caballus
ENSACAG00000002053	SNRPB	92	95.305	ENSEEUG00000015568	SNRPB	75	95.305	Erinaceus_europaeus
ENSACAG00000002053	SNRPB	100	94.828	ENSELUG00000014564	snrpb	97	94.828	Esox_lucius
ENSACAG00000002053	SNRPB	92	95.305	ENSFCAG00000034090	-	92	95.305	Felis_catus
ENSACAG00000002053	SNRPB	100	97.845	ENSFALG00000004866	SNRPB	100	97.845	Ficedula_albicollis
ENSACAG00000002053	SNRPB	92	95.305	ENSFDAG00000009937	SNRPB	92	95.305	Fukomys_damarensis
ENSACAG00000002053	SNRPB	100	97.845	ENSGALG00000035421	SNRPN	97	97.845	Gallus_gallus
ENSACAG00000002053	SNRPB	71	93.333	ENSGAFG00000019558	snrpb	69	95.000	Gambusia_affinis
ENSACAG00000002053	SNRPB	75	91.954	ENSGACG00000003262	snrpb	66	95.625	Gasterosteus_aculeatus
ENSACAG00000002053	SNRPB	100	98.276	ENSGAGG00000001308	SNRPB	97	98.276	Gopherus_agassizii
ENSACAG00000002053	SNRPB	92	95.305	ENSGGOG00000016138	SNRPB	92	95.305	Gorilla_gorilla
ENSACAG00000002053	SNRPB	75	93.064	ENSHBUG00000008369	snrpb	66	95.625	Haplochromis_burtoni
ENSACAG00000002053	SNRPB	61	85.915	ENSHGLG00000016505	-	68	85.915	Heterocephalus_glaber_female
ENSACAG00000002053	SNRPB	92	95.305	ENSHGLG00000016241	-	92	95.305	Heterocephalus_glaber_female
ENSACAG00000002053	SNRPB	92	95.305	ENSHGLG00100012877	-	92	95.305	Heterocephalus_glaber_male
ENSACAG00000002053	SNRPB	61	85.915	ENSHGLG00100004178	-	68	85.915	Heterocephalus_glaber_male
ENSACAG00000002053	SNRPB	75	92.529	ENSHCOG00000014888	snrpb	66	95.625	Hippocampus_comes
ENSACAG00000002053	SNRPB	69	94.375	ENSIPUG00000024569	SNRPB	66	95.625	Ictalurus_punctatus
ENSACAG00000002053	SNRPB	92	78.404	ENSSTOG00000027821	-	60	96.241	Ictidomys_tridecemlineatus
ENSACAG00000002053	SNRPB	92	93.427	ENSSTOG00000033664	-	89	93.427	Ictidomys_tridecemlineatus
ENSACAG00000002053	SNRPB	92	95.305	ENSJJAG00000024170	Snrpb	92	95.305	Jaculus_jaculus
ENSACAG00000002053	SNRPB	71	94.545	ENSKMAG00000014494	snrpb	65	96.250	Kryptolebias_marmoratus
ENSACAG00000002053	SNRPB	75	93.103	ENSLBEG00000005678	snrpb	66	95.625	Labrus_bergylta
ENSACAG00000002053	SNRPB	92	94.836	ENSLACG00000011459	SNRPB	89	94.836	Latimeria_chalumnae
ENSACAG00000002053	SNRPB	69	95.000	ENSLOCG00000002687	snrpb	66	96.250	Lepisosteus_oculatus
ENSACAG00000002053	SNRPB	88	93.171	ENSLAFG00000017588	SNRPB	92	93.171	Loxodonta_africana
ENSACAG00000002053	SNRPB	92	95.305	ENSMFAG00000038756	SNRPB	92	95.305	Macaca_fascicularis
ENSACAG00000002053	SNRPB	92	95.305	ENSMMUG00000010050	SNRPB	92	95.305	Macaca_mulatta
ENSACAG00000002053	SNRPB	92	95.305	ENSMNEG00000027954	SNRPB	92	95.305	Macaca_nemestrina
ENSACAG00000002053	SNRPB	92	95.305	ENSMLEG00000022346	SNRPB	92	95.305	Mandrillus_leucophaeus
ENSACAG00000002053	SNRPB	75	93.064	ENSMAMG00000009294	snrpb	64	95.625	Mastacembelus_armatus
ENSACAG00000002053	SNRPB	75	93.064	ENSMZEG00005011856	snrpb	66	95.625	Maylandia_zebra
ENSACAG00000002053	SNRPB	99	78.603	ENSMICG00000015983	-	83	85.556	Microcebus_murinus
ENSACAG00000002053	SNRPB	92	94.836	ENSMICG00000016519	SNRPB	92	94.836	Microcebus_murinus
ENSACAG00000002053	SNRPB	72	64.671	ENSMOCG00000021362	-	69	70.060	Microtus_ochrogaster
ENSACAG00000002053	SNRPB	92	94.836	ENSMOCG00000002892	-	92	94.836	Microtus_ochrogaster
ENSACAG00000002053	SNRPB	75	92.529	ENSMMOG00000013226	snrpb	68	95.625	Mola_mola
ENSACAG00000002053	SNRPB	75	92.486	ENSMALG00000020839	snrpb	53	95.000	Monopterus_albus
ENSACAG00000002053	SNRPB	92	95.305	MGP_CAROLIEiJ_G0024293	Snrpb	92	95.305	Mus_caroli
ENSACAG00000002053	SNRPB	92	95.305	ENSMUSG00000027404	Snrpb	92	95.305	Mus_musculus
ENSACAG00000002053	SNRPB	92	95.305	MGP_PahariEiJ_G0025738	Snrpb	92	95.305	Mus_pahari
ENSACAG00000002053	SNRPB	92	95.305	MGP_SPRETEiJ_G0025213	Snrpb	92	95.305	Mus_spretus
ENSACAG00000002053	SNRPB	92	95.305	ENSMPUG00000009283	SNRPB	92	95.305	Mustela_putorius_furo
ENSACAG00000002053	SNRPB	92	92.488	ENSMLUG00000016951	SNRPB	89	92.488	Myotis_lucifugus
ENSACAG00000002053	SNRPB	92	95.305	ENSNGAG00000012051	Snrpb	92	95.305	Nannospalax_galili
ENSACAG00000002053	SNRPB	75	93.064	ENSNBRG00000006353	snrpb	61	95.625	Neolamprologus_brichardi
ENSACAG00000002053	SNRPB	92	95.305	ENSNLEG00000029067	SNRPB	90	95.305	Nomascus_leucogenys
ENSACAG00000002053	SNRPB	92	94.836	ENSMEUG00000015625	SNRPB	95	94.836	Notamacropus_eugenii
ENSACAG00000002053	SNRPB	92	95.305	ENSODEG00000004305	-	92	95.305	Octodon_degus
ENSACAG00000002053	SNRPB	78	90.608	ENSODEG00000016060	-	76	91.713	Octodon_degus
ENSACAG00000002053	SNRPB	75	93.064	ENSONIG00000000248	snrpb	66	95.625	Oreochromis_niloticus
ENSACAG00000002053	SNRPB	89	89.855	ENSOCUG00000021456	-	75	91.160	Oryctolagus_cuniculus
ENSACAG00000002053	SNRPB	92	94.836	ENSOCUG00000014042	-	89	94.836	Oryctolagus_cuniculus
ENSACAG00000002053	SNRPB	75	87.429	ENSOCUG00000022423	-	82	92.500	Oryctolagus_cuniculus
ENSACAG00000002053	SNRPB	89	67.961	ENSOCUG00000026813	-	60	66.667	Oryctolagus_cuniculus
ENSACAG00000002053	SNRPB	77	92.179	ENSORLG00000021862	snrpb	66	95.625	Oryzias_latipes
ENSACAG00000002053	SNRPB	92	95.305	ENSOGAG00000016149	SNRPB	89	95.305	Otolemur_garnettii
ENSACAG00000002053	SNRPB	92	94.836	ENSOARG00000006740	SNRPB	92	94.836	Ovis_aries
ENSACAG00000002053	SNRPB	92	95.305	ENSPPAG00000036314	SNRPB	92	95.305	Pan_paniscus
ENSACAG00000002053	SNRPB	92	95.305	ENSPPRG00000003233	-	92	95.305	Panthera_pardus
ENSACAG00000002053	SNRPB	92	95.305	ENSPTIG00000007468	SNRPB	92	95.305	Panthera_tigris_altaica
ENSACAG00000002053	SNRPB	92	95.305	ENSPTRG00000013176	SNRPB	92	95.305	Pan_troglodytes
ENSACAG00000002053	SNRPB	92	95.305	ENSPANG00000020362	SNRPB	89	95.305	Papio_anubis
ENSACAG00000002053	SNRPB	69	93.750	ENSPKIG00000002865	snrpb	66	95.000	Paramormyrops_kingsleyae
ENSACAG00000002053	SNRPB	100	98.276	ENSPSIG00000014125	SNRPB	95	98.276	Pelodiscus_sinensis
ENSACAG00000002053	SNRPB	75	90.805	ENSPMGG00000016349	snrpb	68	93.125	Periophthalmus_magnuspinnatus
ENSACAG00000002053	SNRPB	92	95.305	ENSPEMG00000007948	Snrpb	92	95.305	Peromyscus_maniculatus_bairdii
ENSACAG00000002053	SNRPB	92	94.836	ENSPCIG00000004694	SNRPB	88	94.836	Phascolarctos_cinereus
ENSACAG00000002053	SNRPB	66	87.582	ENSPLAG00000014130	snrpb	58	97.744	Poecilia_latipinna
ENSACAG00000002053	SNRPB	92	95.305	ENSPPYG00000010841	SNRPB	92	95.305	Pongo_abelii
ENSACAG00000002053	SNRPB	92	95.305	ENSPCOG00000013686	SNRPB	92	95.305	Propithecus_coquereli
ENSACAG00000002053	SNRPB	92	94.366	ENSPVAG00000017013	SNRPB	75	94.366	Pteropus_vampyrus
ENSACAG00000002053	SNRPB	75	93.064	ENSPNYG00000014788	snrpb	66	95.625	Pundamilia_nyererei
ENSACAG00000002053	SNRPB	69	93.750	ENSPNAG00000016126	snrpb	66	95.625	Pygocentrus_nattereri
ENSACAG00000002053	SNRPB	92	95.305	ENSRNOG00000006961	Snrpb	92	95.305	Rattus_norvegicus
ENSACAG00000002053	SNRPB	69	96.250	ENSRBIG00000040505	SNRPB	70	96.250	Rhinopithecus_bieti
ENSACAG00000002053	SNRPB	92	95.305	ENSRROG00000036094	SNRPB	92	95.305	Rhinopithecus_roxellana
ENSACAG00000002053	SNRPB	92	95.305	ENSSBOG00000027310	SNRPB	92	95.305	Saimiri_boliviensis_boliviensis
ENSACAG00000002053	SNRPB	100	96.121	ENSSHAG00000010394	SNRPB	97	96.121	Sarcophilus_harrisii
ENSACAG00000002053	SNRPB	69	93.125	ENSSFOG00015002870	snrpb	67	94.375	Scleropages_formosus
ENSACAG00000002053	SNRPB	75	91.954	ENSSMAG00000006766	snrpb	66	95.000	Scophthalmus_maximus
ENSACAG00000002053	SNRPB	75	93.064	ENSSDUG00000018539	snrpb	66	95.625	Seriola_dumerili
ENSACAG00000002053	SNRPB	75	93.064	ENSSLDG00000022391	snrpb	66	95.625	Seriola_lalandi_dorsalis
ENSACAG00000002053	SNRPB	92	83.099	ENSSARG00000003084	SNRPB	91	83.099	Sorex_araneus
ENSACAG00000002053	SNRPB	100	98.276	ENSSPUG00000015659	SNRPB	97	98.276	Sphenodon_punctatus
ENSACAG00000002053	SNRPB	75	93.064	ENSSPAG00000021992	snrpb	66	95.625	Stegastes_partitus
ENSACAG00000002053	SNRPB	92	94.836	ENSSSCG00000040857	-	92	94.836	Sus_scrofa
ENSACAG00000002053	SNRPB	95	75.566	ENSSSCG00000011966	-	91	72.300	Sus_scrofa
ENSACAG00000002053	SNRPB	75	79.429	ENSTGUG00000005684	SNRPB	56	99.248	Taeniopygia_guttata
ENSACAG00000002053	SNRPB	75	91.954	ENSTRUG00000023094	snrpb	69	95.000	Takifugu_rubripes
ENSACAG00000002053	SNRPB	75	91.954	ENSTNIG00000002991	snrpb	66	95.000	Tetraodon_nigroviridis
ENSACAG00000002053	SNRPB	92	76.056	ENSUAMG00000005984	-	80	95.808	Ursus_americanus
ENSACAG00000002053	SNRPB	57	96.241	ENSUMAG00000002123	-	61	96.241	Ursus_maritimus
ENSACAG00000002053	SNRPB	100	72.845	ENSVVUG00000010086	-	81	77.660	Vulpes_vulpes
ENSACAG00000002053	SNRPB	92	94.836	ENSVVUG00000025654	-	89	94.836	Vulpes_vulpes
ENSACAG00000002053	SNRPB	92	96.244	ENSXETG00000027266	snrpb	90	96.244	Xenopus_tropicalis
ENSACAG00000002053	SNRPB	73	80.473	ENSXMAG00000028767	snrpb	57	97.744	Xiphophorus_maculatus