EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000002061 (Gene tree)
Gene ID: 100566509
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 8723 bases
Position: chrGL343365.1:501435-510157
Accession: 100566509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000002019	RRM_1	PF00076.22	1.5e-32	1	2
ENSACAP00000002019	RRM_1	PF00076.22	1.5e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000002067	SRSF6-201	1097	XM_003226300	ENSACAP00000002019	349 (aa)	XP_003226348	H9G5X8

Gene Model

Click here to download ENSACAG00000002061's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG
acs05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000002061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000002061	SRSF6	51	64.835	ENSACAG00000029015	-	67	64.045
ENSACAG00000002061	SRSF6	56	43.204	ENSACAG00000005542	-	78	41.791
ENSACAG00000002061	SRSF6	66	54.741	ENSACAG00000005143	SRSF5	66	64.205

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000002061	SRSF6	93	84.923	ENSG00000124193	SRSF6	94	82.407	Homo_sapiens
ENSACAG00000002061	SRSF6	92	73.065	ENSAMEG00000003710	SRSF6	94	69.018	Ailuropoda_melanoleuca
ENSACAG00000002061	SRSF6	85	69.565	ENSACIG00000023658	-	56	87.151	Amphilophus_citrinellus
ENSACAG00000002061	SRSF6	71	74.297	ENSACIG00000020091	-	95	78.740	Amphilophus_citrinellus
ENSACAG00000002061	SRSF6	52	85.635	ENSAOCG00000004309	-	57	85.635	Amphiprion_ocellaris
ENSACAG00000002061	SRSF6	53	81.053	ENSAPEG00000020746	-	65	80.978	Amphiprion_percula
ENSACAG00000002061	SRSF6	52	88.649	ENSAPEG00000013086	-	53	88.649	Amphiprion_percula
ENSACAG00000002061	SRSF6	52	83.333	ENSATEG00000007255	-	71	80.328	Anabas_testudineus
ENSACAG00000002061	SRSF6	82	85.567	ENSAPLG00000014472	SRSF6	93	85.567	Anas_platyrhynchos
ENSACAG00000002061	SRSF6	93	84.615	ENSANAG00000024080	SRSF6	94	82.099	Aotus_nancymaae
ENSACAG00000002061	SRSF6	52	82.796	ENSAMXG00000042692	-	96	79.259	Astyanax_mexicanus
ENSACAG00000002061	SRSF6	92	82.609	ENSBTAG00000008527	SRSF6	94	81.288	Bos_taurus
ENSACAG00000002061	SRSF6	53	91.979	ENSCJAG00000048403	SRSF6	68	94.536	Callithrix_jacchus
ENSACAG00000002061	SRSF6	92	83.230	ENSCAFG00000009289	SRSF6	94	80.000	Canis_familiaris
ENSACAG00000002061	SRSF6	92	83.230	ENSCAFG00020013559	SRSF6	94	80.000	Canis_lupus_dingo
ENSACAG00000002061	SRSF6	92	82.298	ENSCHIG00000009148	-	94	80.982	Capra_hircus
ENSACAG00000002061	SRSF6	92	82.919	ENSCHIG00000015890	-	94	81.595	Capra_hircus
ENSACAG00000002061	SRSF6	91	71.293	ENSTSYG00000026476	SRSF6	93	66.871	Carlito_syrichta
ENSACAG00000002061	SRSF6	98	69.855	ENSCPOG00000011761	SRSF6	58	94.872	Cavia_porcellus
ENSACAG00000002061	SRSF6	66	76.132	ENSCCAG00000018540	-	60	83.152	Cebus_capucinus
ENSACAG00000002061	SRSF6	93	84.615	ENSCCAG00000026018	-	94	82.099	Cebus_capucinus
ENSACAG00000002061	SRSF6	92	85.093	ENSCATG00000030794	SRSF6	94	82.099	Cercocebus_atys
ENSACAG00000002061	SRSF6	92	85.802	ENSCLAG00000010247	SRSF6	94	81.595	Chinchilla_lanigera
ENSACAG00000002061	SRSF6	92	85.093	ENSCSAG00000014022	SRSF6	94	82.099	Chlorocebus_sabaeus
ENSACAG00000002061	SRSF6	78	94.444	ENSCHOG00000000561	SRSF6	77	94.444	Choloepus_hoffmanni
ENSACAG00000002061	SRSF6	91	90.712	ENSCPBG00000018200	SRSF6	94	92.049	Chrysemys_picta_bellii
ENSACAG00000002061	SRSF6	92	84.783	ENSCANG00000037774	-	94	81.790	Colobus_angolensis_palliatus
ENSACAG00000002061	SRSF6	92	70.312	ENSCANG00000042529	-	93	67.183	Colobus_angolensis_palliatus
ENSACAG00000002061	SRSF6	98	83.478	ENSCGRG00001022339	Srsf6	100	82.319	Cricetulus_griseus_chok1gshd
ENSACAG00000002061	SRSF6	62	80.093	ENSCGRG00000006618	Srsf6	100	76.389	Cricetulus_griseus_crigri
ENSACAG00000002061	SRSF6	52	82.353	ENSDARG00000016783	srsf6b	82	88.462	Danio_rerio
ENSACAG00000002061	SRSF6	92	84.969	ENSDNOG00000008410	SRSF6	94	80.675	Dasypus_novemcinctus
ENSACAG00000002061	SRSF6	93	85.321	ENSDORG00000028378	Srsf6	94	81.595	Dipodomys_ordii
ENSACAG00000002061	SRSF6	91	83.699	ENSETEG00000006221	SRSF6	94	83.591	Echinops_telfairi
ENSACAG00000002061	SRSF6	92	69.565	ENSEASG00005023429	SRSF6	53	93.443	Equus_asinus_asinus
ENSACAG00000002061	SRSF6	92	69.565	ENSECAG00000023932	SRSF6	56	93.443	Equus_caballus
ENSACAG00000002061	SRSF6	87	63.636	ENSELUG00000013506	SRSF6	70	85.897	Esox_lucius
ENSACAG00000002061	SRSF6	92	83.230	ENSFCAG00000032814	SRSF6	94	80.000	Felis_catus
ENSACAG00000002061	SRSF6	66	86.207	ENSFALG00000012776	SRSF6	87	88.261	Ficedula_albicollis
ENSACAG00000002061	SRSF6	92	70.497	ENSFDAG00000012191	SRSF6	93	66.769	Fukomys_damarensis
ENSACAG00000002061	SRSF6	86	69.967	ENSFHEG00000023065	srsf6a	54	86.813	Fundulus_heteroclitus
ENSACAG00000002061	SRSF6	51	83.333	ENSGMOG00000014458	srsf6a	51	80.526	Gadus_morhua
ENSACAG00000002061	SRSF6	64	65.179	ENSGMOG00000006105	srsf6a	88	54.472	Gadus_morhua
ENSACAG00000002061	SRSF6	91	85.583	ENSGALG00000000990	SRSF6	94	84.848	Gallus_gallus
ENSACAG00000002061	SRSF6	86	60.947	ENSGACG00000006084	srsf6a	53	83.243	Gasterosteus_aculeatus
ENSACAG00000002061	SRSF6	91	90.712	ENSGAGG00000003238	SRSF6	94	92.049	Gopherus_agassizii
ENSACAG00000002061	SRSF6	93	84.923	ENSGGOG00000009808	SRSF6	94	82.407	Gorilla_gorilla
ENSACAG00000002061	SRSF6	62	73.451	ENSHBUG00000006386	-	57	86.188	Haplochromis_burtoni
ENSACAG00000002061	SRSF6	89	69.775	ENSHGLG00000007701	-	57	72.376	Heterocephalus_glaber_female
ENSACAG00000002061	SRSF6	92	85.802	ENSHGLG00000007348	SRSF6	94	81.595	Heterocephalus_glaber_female
ENSACAG00000002061	SRSF6	92	70.625	ENSHGLG00100005043	SRSF6	93	67.077	Heterocephalus_glaber_male
ENSACAG00000002061	SRSF6	52	85.083	ENSHCOG00000002740	srsf6a	57	85.083	Hippocampus_comes
ENSACAG00000002061	SRSF6	52	87.363	ENSIPUG00000004776	-	63	86.740	Ictalurus_punctatus
ENSACAG00000002061	SRSF6	93	84.923	ENSSTOG00000010866	SRSF6	94	82.407	Ictidomys_tridecemlineatus
ENSACAG00000002061	SRSF6	52	85.870	ENSLBEG00000007356	srsf6a	51	85.870	Labrus_bergylta
ENSACAG00000002061	SRSF6	87	83.871	ENSLACG00000005466	SRSF6	54	90.710	Latimeria_chalumnae
ENSACAG00000002061	SRSF6	67	84.810	ENSLAFG00000006682	SRSF6	89	85.281	Loxodonta_africana
ENSACAG00000002061	SRSF6	92	85.093	ENSMFAG00000036925	SRSF6	94	82.099	Macaca_fascicularis
ENSACAG00000002061	SRSF6	92	85.093	ENSMMUG00000006742	SRSF6	94	82.099	Macaca_mulatta
ENSACAG00000002061	SRSF6	92	84.472	ENSMNEG00000027392	-	94	81.481	Macaca_nemestrina
ENSACAG00000002061	SRSF6	92	83.851	ENSMNEG00000038270	-	94	80.864	Macaca_nemestrina
ENSACAG00000002061	SRSF6	55	81.347	ENSMLEG00000031524	SRSF6	90	74.359	Mandrillus_leucophaeus
ENSACAG00000002061	SRSF6	52	88.108	ENSMAMG00000017161	srsf6a	53	88.108	Mastacembelus_armatus
ENSACAG00000002061	SRSF6	66	76.856	ENSMZEG00005008032	-	57	86.188	Maylandia_zebra
ENSACAG00000002061	SRSF6	66	79.565	ENSMGAG00000000888	SRSF6	84	87.826	Meleagris_gallopavo
ENSACAG00000002061	SRSF6	93	82.769	ENSMICG00000008537	SRSF6	94	80.308	Microcebus_murinus
ENSACAG00000002061	SRSF6	62	80.093	ENSMOCG00000018738	Srsf6	100	76.389	Microtus_ochrogaster
ENSACAG00000002061	SRSF6	52	91.398	ENSMODG00000003107	SRSF6	95	89.846	Monodelphis_domestica
ENSACAG00000002061	SRSF6	98	83.188	MGP_CAROLIEiJ_G0024606	Srsf6	100	82.029	Mus_caroli
ENSACAG00000002061	SRSF6	98	83.188	ENSMUSG00000016921	Srsf6	100	82.029	Mus_musculus
ENSACAG00000002061	SRSF6	98	83.478	MGP_PahariEiJ_G0026050	Srsf6	100	82.319	Mus_pahari
ENSACAG00000002061	SRSF6	98	83.188	MGP_SPRETEiJ_G0025528	Srsf6	100	82.029	Mus_spretus
ENSACAG00000002061	SRSF6	53	90.909	ENSMPUG00000017692	SRSF6	64	93.443	Mustela_putorius_furo
ENSACAG00000002061	SRSF6	92	66.282	ENSMLUG00000016618	SRSF6	94	63.818	Myotis_lucifugus
ENSACAG00000002061	SRSF6	92	84.161	ENSNGAG00000017560	Srsf6	95	80.556	Nannospalax_galili
ENSACAG00000002061	SRSF6	52	82.873	ENSNBRG00000014709	-	57	86.188	Neolamprologus_brichardi
ENSACAG00000002061	SRSF6	51	88.525	ENSNBRG00000001846	-	52	88.108	Neolamprologus_brichardi
ENSACAG00000002061	SRSF6	93	84.923	ENSNLEG00000006524	SRSF6	94	82.407	Nomascus_leucogenys
ENSACAG00000002061	SRSF6	52	91.398	ENSMEUG00000014615	SRSF6	61	94.022	Notamacropus_eugenii
ENSACAG00000002061	SRSF6	68	81.857	ENSOPRG00000002017	-	89	78.355	Ochotona_princeps
ENSACAG00000002061	SRSF6	70	70.312	ENSONIG00000020247	-	53	83.978	Oreochromis_niloticus
ENSACAG00000002061	SRSF6	86	72.549	ENSONIG00000001925	-	71	63.529	Oreochromis_niloticus
ENSACAG00000002061	SRSF6	51	59.322	ENSOCUG00000023999	-	70	54.190	Oryctolagus_cuniculus
ENSACAG00000002061	SRSF6	53	73.196	ENSOCUG00000009785	-	63	71.958	Oryctolagus_cuniculus
ENSACAG00000002061	SRSF6	93	82.769	ENSOGAG00000014468	SRSF6	53	93.989	Otolemur_garnettii
ENSACAG00000002061	SRSF6	92	81.308	ENSOARG00000003117	SRSF6	94	78.769	Ovis_aries
ENSACAG00000002061	SRSF6	89	74.434	ENSPPAG00000043131	-	57	79.558	Pan_paniscus
ENSACAG00000002061	SRSF6	93	84.615	ENSPPAG00000034327	-	94	82.099	Pan_paniscus
ENSACAG00000002061	SRSF6	92	83.230	ENSPPRG00000008917	SRSF6	94	80.000	Panthera_pardus
ENSACAG00000002061	SRSF6	89	74.434	ENSPTRG00000046274	-	57	79.558	Pan_troglodytes
ENSACAG00000002061	SRSF6	93	85.231	ENSPTRG00000044686	-	94	82.716	Pan_troglodytes
ENSACAG00000002061	SRSF6	92	85.093	ENSPANG00000035224	SRSF6	94	82.099	Papio_anubis
ENSACAG00000002061	SRSF6	77	75.362	ENSPKIG00000015703	-	95	62.585	Paramormyrops_kingsleyae
ENSACAG00000002061	SRSF6	89	69.620	ENSPKIG00000018463	-	77	92.308	Paramormyrops_kingsleyae
ENSACAG00000002061	SRSF6	85	72.667	ENSPMGG00000014963	srsf6a	55	87.978	Periophthalmus_magnuspinnatus
ENSACAG00000002061	SRSF6	52	91.398	ENSPCIG00000003820	SRSF6	95	89.538	Phascolarctos_cinereus
ENSACAG00000002061	SRSF6	52	91.379	ENSPFOG00000006437	srsf6a	50	84.656	Poecilia_formosa
ENSACAG00000002061	SRSF6	86	64.465	ENSPLAG00000009243	srsf6a	80	80.315	Poecilia_latipinna
ENSACAG00000002061	SRSF6	52	85.326	ENSPMEG00000006042	SRSF6	53	86.413	Poecilia_mexicana
ENSACAG00000002061	SRSF6	93	84.923	ENSPPYG00000011019	SRSF6	94	82.407	Pongo_abelii
ENSACAG00000002061	SRSF6	52	91.351	ENSPCAG00000010954	SRSF6	55	93.989	Procavia_capensis
ENSACAG00000002061	SRSF6	93	82.769	ENSPCOG00000026364	SRSF6	94	80.000	Propithecus_coquereli
ENSACAG00000002061	SRSF6	92	85.093	ENSPVAG00000015232	SRSF6	94	82.099	Pteropus_vampyrus
ENSACAG00000002061	SRSF6	51	88.525	ENSPNYG00000011272	-	51	88.108	Pundamilia_nyererei
ENSACAG00000002061	SRSF6	52	82.873	ENSPNYG00000004944	-	57	86.188	Pundamilia_nyererei
ENSACAG00000002061	SRSF6	98	83.188	ENSRNOG00000006380	Srsf6	100	82.029	Rattus_norvegicus
ENSACAG00000002061	SRSF6	92	82.500	ENSRBIG00000041414	SRSF6	60	94.872	Rhinopithecus_bieti
ENSACAG00000002061	SRSF6	92	85.093	ENSRROG00000029989	SRSF6	58	94.872	Rhinopithecus_roxellana
ENSACAG00000002061	SRSF6	51	75.138	ENSSBOG00000034078	-	54	74.860	Saimiri_boliviensis_boliviensis
ENSACAG00000002061	SRSF6	93	84.615	ENSSBOG00000033708	-	94	82.099	Saimiri_boliviensis_boliviensis
ENSACAG00000002061	SRSF6	52	91.398	ENSSHAG00000012805	SRSF6	95	89.846	Sarcophilus_harrisii
ENSACAG00000002061	SRSF6	91	65.352	ENSSFOG00015019681	-	53	82.383	Scleropages_formosus
ENSACAG00000002061	SRSF6	66	75.862	ENSSMAG00000017447	-	55	81.667	Scophthalmus_maximus
ENSACAG00000002061	SRSF6	52	88.108	ENSSDUG00000016097	srsf6a	53	88.108	Seriola_dumerili
ENSACAG00000002061	SRSF6	52	88.108	ENSSLDG00000022841	srsf6a	57	85.427	Seriola_lalandi_dorsalis
ENSACAG00000002061	SRSF6	67	81.624	ENSSARG00000001602	SRSF6	88	74.348	Sorex_araneus
ENSACAG00000002061	SRSF6	52	98.343	ENSSPUG00000004967	SRSF6	94	88.509	Sphenodon_punctatus
ENSACAG00000002061	SRSF6	69	72.308	ENSSPAG00000002362	srsf6a	66	86.170	Stegastes_partitus
ENSACAG00000002061	SRSF6	92	82.609	ENSSSCG00000007362	SRSF6	94	82.209	Sus_scrofa
ENSACAG00000002061	SRSF6	91	87.307	ENSTGUG00000003455	SRSF6	94	86.850	Taeniopygia_guttata
ENSACAG00000002061	SRSF6	86	72.277	ENSTNIG00000001692	srsf6a	56	86.486	Tetraodon_nigroviridis
ENSACAG00000002061	SRSF6	83	80.479	ENSTBEG00000013448	SRSF6	92	77.663	Tupaia_belangeri
ENSACAG00000002061	SRSF6	66	82.759	ENSTTRG00000015410	SRSF6	88	77.922	Tursiops_truncatus
ENSACAG00000002061	SRSF6	92	83.230	ENSUAMG00000003559	SRSF6	94	80.000	Ursus_americanus
ENSACAG00000002061	SRSF6	74	92.593	ENSVPAG00000003016	SRSF6	74	92.593	Vicugna_pacos
ENSACAG00000002061	SRSF6	52	88.398	ENSXMAG00000021849	srsf6a	55	88.398	Xiphophorus_maculatus