EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000002103 (Gene tree)
Gene ID: 100564559
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 14184 bases
Position: chr2:54574067-54588250
Accession: 100564559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000002171	SRP54	PF00448.22	1.5e-77	1	1
ENSACAP00000002171	SRP54_N	PF02881.19	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000002230	-	1512	XM_008103386	ENSACAP00000002171	503 (aa)	XP_008101593	G1KAG5

Gene Model

Click here to download ENSACAG00000002103's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000002103's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000002103	-	65	83.030	ENSACAG00000001124	-	100	83.030
ENSACAG00000002103	-	86	96.774	ENSACAG00000010631	-	100	96.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000002103	-	100	98.611	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSACAG00000002103	-	100	95.238	ENSAPOG00000011314	srp54	100	95.238	Acanthochromis_polyacanthus
ENSACAG00000002103	-	100	98.611	ENSAMEG00000015544	SRP54	100	98.611	Ailuropoda_melanoleuca
ENSACAG00000002103	-	89	93.541	ENSACIG00000022831	srp54	97	93.541	Amphilophus_citrinellus
ENSACAG00000002103	-	100	95.238	ENSAOCG00000019401	srp54	100	95.238	Amphiprion_ocellaris
ENSACAG00000002103	-	100	95.238	ENSAPEG00000001977	srp54	100	95.238	Amphiprion_percula
ENSACAG00000002103	-	100	95.635	ENSATEG00000013877	srp54	100	95.635	Anabas_testudineus
ENSACAG00000002103	-	94	98.945	ENSAPLG00000010125	SRP54	95	98.945	Anas_platyrhynchos
ENSACAG00000002103	-	100	98.611	ENSANAG00000022133	SRP54	100	98.611	Aotus_nancymaae
ENSACAG00000002103	-	100	95.437	ENSACLG00000015866	srp54	100	95.437	Astatotilapia_calliptera
ENSACAG00000002103	-	100	95.437	ENSAMXG00000032669	SRP54	100	95.437	Astyanax_mexicanus
ENSACAG00000002103	-	100	98.611	ENSBTAG00000019085	SRP54	100	98.611	Bos_taurus
ENSACAG00000002103	-	98	71.084	WBGene00009012	F21D5.7	100	71.084	Caenorhabditis_elegans
ENSACAG00000002103	-	100	98.611	ENSCJAG00000006581	SRP54	100	98.611	Callithrix_jacchus
ENSACAG00000002103	-	100	98.611	ENSCAFG00000013331	SRP54	100	98.611	Canis_familiaris
ENSACAG00000002103	-	100	98.611	ENSCAFG00020023427	SRP54	100	98.611	Canis_lupus_dingo
ENSACAG00000002103	-	100	98.611	ENSCHIG00000026345	SRP54	100	98.611	Capra_hircus
ENSACAG00000002103	-	94	87.158	ENSTSYG00000035333	-	93	87.158	Carlito_syrichta
ENSACAG00000002103	-	100	98.413	ENSTSYG00000002680	-	100	98.413	Carlito_syrichta
ENSACAG00000002103	-	94	63.061	ENSCAPG00000008780	SRP54	100	63.061	Cavia_aperea
ENSACAG00000002103	-	100	98.214	ENSCPOG00000003691	SRP54	100	98.214	Cavia_porcellus
ENSACAG00000002103	-	90	98.095	ENSCCAG00000024179	SRP54	100	98.329	Cebus_capucinus
ENSACAG00000002103	-	100	98.611	ENSCATG00000034083	SRP54	100	98.611	Cercocebus_atys
ENSACAG00000002103	-	100	98.611	ENSCLAG00000015076	SRP54	100	98.611	Chinchilla_lanigera
ENSACAG00000002103	-	100	98.611	ENSCSAG00000015575	SRP54	100	98.611	Chlorocebus_sabaeus
ENSACAG00000002103	-	95	86.486	ENSCHOG00000008986	SRP54	100	86.486	Choloepus_hoffmanni
ENSACAG00000002103	-	100	99.405	ENSCPBG00000026195	SRP54	100	99.405	Chrysemys_picta_bellii
ENSACAG00000002103	-	100	81.151	ENSCING00000007380	-	100	81.151	Ciona_intestinalis
ENSACAG00000002103	-	100	98.611	ENSCANG00000028532	SRP54	100	98.611	Colobus_angolensis_palliatus
ENSACAG00000002103	-	100	98.214	ENSCGRG00001009525	-	100	98.214	Cricetulus_griseus_chok1gshd
ENSACAG00000002103	-	76	98.182	ENSCGRG00000009453	-	89	98.182	Cricetulus_griseus_crigri
ENSACAG00000002103	-	100	94.444	ENSCSEG00000012392	srp54	100	94.444	Cynoglossus_semilaevis
ENSACAG00000002103	-	100	95.238	ENSCVAG00000010395	srp54	100	95.238	Cyprinodon_variegatus
ENSACAG00000002103	-	100	95.437	ENSDARG00000098367	srp54	100	95.437	Danio_rerio
ENSACAG00000002103	-	100	98.611	ENSDNOG00000032525	SRP54	100	98.611	Dasypus_novemcinctus
ENSACAG00000002103	-	89	84.071	ENSDORG00000005159	-	98	84.071	Dipodomys_ordii
ENSACAG00000002103	-	96	76.907	FBgn0010747	Srp54k	98	76.506	Drosophila_melanogaster
ENSACAG00000002103	-	100	97.421	ENSETEG00000016307	-	100	97.421	Echinops_telfairi
ENSACAG00000002103	-	83	56.938	ENSETEG00000012102	-	99	56.938	Echinops_telfairi
ENSACAG00000002103	-	100	87.103	ENSEBUG00000009437	-	100	87.103	Eptatretus_burgeri
ENSACAG00000002103	-	100	98.611	ENSEASG00005002057	SRP54	100	98.611	Equus_asinus_asinus
ENSACAG00000002103	-	99	98.394	ENSECAG00000018042	SRP54	98	98.394	Equus_caballus
ENSACAG00000002103	-	100	81.944	ENSEEUG00000001511	SRP54	100	81.944	Erinaceus_europaeus
ENSACAG00000002103	-	100	94.643	ENSELUG00000003395	srp54	100	94.643	Esox_lucius
ENSACAG00000002103	-	100	98.413	ENSFCAG00000032033	SRP54	100	98.413	Felis_catus
ENSACAG00000002103	-	100	99.008	ENSFALG00000005995	SRP54	100	99.008	Ficedula_albicollis
ENSACAG00000002103	-	100	98.611	ENSFDAG00000016767	SRP54	100	98.611	Fukomys_damarensis
ENSACAG00000002103	-	100	94.841	ENSFHEG00000004263	srp54	100	94.841	Fundulus_heteroclitus
ENSACAG00000002103	-	95	89.540	ENSGMOG00000011391	srp54	100	89.540	Gadus_morhua
ENSACAG00000002103	-	100	99.008	ENSGALG00000023135	SRP54	100	99.008	Gallus_gallus
ENSACAG00000002103	-	100	95.437	ENSGAFG00000011586	srp54	100	95.437	Gambusia_affinis
ENSACAG00000002103	-	100	94.841	ENSGACG00000004181	srp54	100	94.841	Gasterosteus_aculeatus
ENSACAG00000002103	-	100	99.405	ENSGAGG00000014766	SRP54	100	99.405	Gopherus_agassizii
ENSACAG00000002103	-	100	98.611	ENSGGOG00000002926	SRP54	100	98.611	Gorilla_gorilla
ENSACAG00000002103	-	100	95.437	ENSHBUG00000005678	srp54	100	95.437	Haplochromis_burtoni
ENSACAG00000002103	-	100	98.611	ENSHGLG00000002850	SRP54	100	98.611	Heterocephalus_glaber_female
ENSACAG00000002103	-	100	68.119	ENSHGLG00100007281	-	100	68.119	Heterocephalus_glaber_male
ENSACAG00000002103	-	100	98.611	ENSHGLG00100005263	SRP54	100	98.611	Heterocephalus_glaber_male
ENSACAG00000002103	-	100	93.452	ENSHCOG00000021127	srp54	100	93.452	Hippocampus_comes
ENSACAG00000002103	-	100	95.040	ENSIPUG00000001420	srp54	100	95.040	Ictalurus_punctatus
ENSACAG00000002103	-	100	98.611	ENSSTOG00000016023	SRP54	100	98.611	Ictidomys_tridecemlineatus
ENSACAG00000002103	-	100	93.837	ENSJJAG00000013417	-	100	93.837	Jaculus_jaculus
ENSACAG00000002103	-	87	75.909	ENSJJAG00000016404	-	100	75.909	Jaculus_jaculus
ENSACAG00000002103	-	100	94.841	ENSKMAG00000007707	srp54	100	94.841	Kryptolebias_marmoratus
ENSACAG00000002103	-	100	95.238	ENSLBEG00000018690	srp54	100	95.238	Labrus_bergylta
ENSACAG00000002103	-	100	95.238	ENSLBEG00000021122	srp54	100	95.238	Labrus_bergylta
ENSACAG00000002103	-	100	95.437	ENSLACG00000017890	SRP54	100	95.437	Latimeria_chalumnae
ENSACAG00000002103	-	100	96.230	ENSLOCG00000009440	srp54	100	96.230	Lepisosteus_oculatus
ENSACAG00000002103	-	100	98.611	ENSLAFG00000012007	SRP54	100	98.611	Loxodonta_africana
ENSACAG00000002103	-	100	98.611	ENSMFAG00000044371	SRP54	100	98.611	Macaca_fascicularis
ENSACAG00000002103	-	100	98.611	ENSMMUG00000015073	FAM177A1	100	98.611	Macaca_mulatta
ENSACAG00000002103	-	100	98.611	ENSMNEG00000006947	SRP54	100	98.611	Macaca_nemestrina
ENSACAG00000002103	-	100	98.611	ENSMLEG00000042251	SRP54	100	98.611	Mandrillus_leucophaeus
ENSACAG00000002103	-	100	95.437	ENSMAMG00000004803	srp54	100	95.437	Mastacembelus_armatus
ENSACAG00000002103	-	100	95.437	ENSMZEG00005027528	srp54	100	95.437	Maylandia_zebra
ENSACAG00000002103	-	100	94.269	ENSMGAG00000012481	SRP54	100	94.269	Meleagris_gallopavo
ENSACAG00000002103	-	100	98.413	ENSMAUG00000014447	-	100	98.413	Mesocricetus_auratus
ENSACAG00000002103	-	100	98.611	ENSMICG00000010270	SRP54	100	98.611	Microcebus_murinus
ENSACAG00000002103	-	87	98.182	ENSMOCG00000000948	-	100	98.182	Microtus_ochrogaster
ENSACAG00000002103	-	90	92.070	ENSMMOG00000020303	srp54	99	92.070	Mola_mola
ENSACAG00000002103	-	100	98.413	ENSMODG00000012925	-	100	98.413	Monodelphis_domestica
ENSACAG00000002103	-	100	98.413	ENSMODG00000023150	-	100	98.413	Monodelphis_domestica
ENSACAG00000002103	-	88	94.357	ENSMALG00000009163	srp54	98	94.357	Monopterus_albus
ENSACAG00000002103	-	100	98.413	MGP_CAROLIEiJ_G0017754	-	100	98.413	Mus_caroli
ENSACAG00000002103	-	100	98.413	ENSMUSG00000112449	Srp54b	100	98.413	Mus_musculus
ENSACAG00000002103	-	100	97.619	ENSMUSG00000079108	Srp54c	100	97.619	Mus_musculus
ENSACAG00000002103	-	100	98.413	ENSMUSG00000073079	Srp54a	100	99.091	Mus_musculus
ENSACAG00000002103	-	100	98.413	MGP_PahariEiJ_G0029510	-	100	98.413	Mus_pahari
ENSACAG00000002103	-	100	98.611	ENSMPUG00000016302	SRP54	100	98.611	Mustela_putorius_furo
ENSACAG00000002103	-	100	98.016	ENSMLUG00000008958	SRP54	100	98.016	Myotis_lucifugus
ENSACAG00000002103	-	100	88.492	ENSNGAG00000019806	-	100	88.492	Nannospalax_galili
ENSACAG00000002103	-	87	95.000	ENSNBRG00000006000	srp54	100	95.000	Neolamprologus_brichardi
ENSACAG00000002103	-	100	98.611	ENSNLEG00000003496	SRP54	100	98.611	Nomascus_leucogenys
ENSACAG00000002103	-	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSACAG00000002103	-	57	97.222	ENSOPRG00000014502	-	60	97.222	Ochotona_princeps
ENSACAG00000002103	-	100	98.611	ENSODEG00000004865	SRP54	100	98.611	Octodon_degus
ENSACAG00000002103	-	100	95.437	ENSONIG00000011768	srp54	100	95.437	Oreochromis_niloticus
ENSACAG00000002103	-	100	98.611	ENSOANG00000014051	SRP54	100	98.611	Ornithorhynchus_anatinus
ENSACAG00000002103	-	100	98.016	ENSOCUG00000007838	SRP54	100	98.016	Oryctolagus_cuniculus
ENSACAG00000002103	-	100	95.238	ENSORLG00000010027	srp54	100	95.238	Oryzias_latipes
ENSACAG00000002103	-	100	95.238	ENSORLG00020001878	srp54	100	95.238	Oryzias_latipes_hni
ENSACAG00000002103	-	100	95.238	ENSORLG00015021866	srp54	100	95.238	Oryzias_latipes_hsok
ENSACAG00000002103	-	100	95.040	ENSOMEG00000020952	srp54	100	95.040	Oryzias_melastigma
ENSACAG00000002103	-	100	98.611	ENSOGAG00000012188	SRP54	100	98.611	Otolemur_garnettii
ENSACAG00000002103	-	100	98.611	ENSOARG00000007160	SRP54	100	98.611	Ovis_aries
ENSACAG00000002103	-	100	98.611	ENSPPAG00000017434	SRP54	100	98.611	Pan_paniscus
ENSACAG00000002103	-	100	97.421	ENSPPRG00000014047	SRP54	100	97.421	Panthera_pardus
ENSACAG00000002103	-	100	98.413	ENSPTIG00000000744	SRP54	96	98.413	Panthera_tigris_altaica
ENSACAG00000002103	-	100	98.611	ENSPTRG00000006259	FAM177A1	100	98.611	Pan_troglodytes
ENSACAG00000002103	-	100	98.611	ENSPANG00000023853	SRP54	100	98.611	Papio_anubis
ENSACAG00000002103	-	100	95.040	ENSPKIG00000001953	srp54	100	95.040	Paramormyrops_kingsleyae
ENSACAG00000002103	-	100	99.206	ENSPSIG00000006476	SRP54	100	99.206	Pelodiscus_sinensis
ENSACAG00000002103	-	91	91.739	ENSPMGG00000004127	srp54	99	91.739	Periophthalmus_magnuspinnatus
ENSACAG00000002103	-	100	86.680	ENSPEMG00000019634	-	100	86.680	Peromyscus_maniculatus_bairdii
ENSACAG00000002103	-	100	88.294	ENSPMAG00000006078	-	100	88.294	Petromyzon_marinus
ENSACAG00000002103	-	100	98.413	ENSPCIG00000016175	SRP54	100	98.413	Phascolarctos_cinereus
ENSACAG00000002103	-	100	95.437	ENSPFOG00000008870	srp54	100	95.437	Poecilia_formosa
ENSACAG00000002103	-	100	95.437	ENSPLAG00000009889	srp54	100	95.437	Poecilia_latipinna
ENSACAG00000002103	-	100	95.437	ENSPMEG00000008601	srp54	100	95.437	Poecilia_mexicana
ENSACAG00000002103	-	100	95.437	ENSPREG00000004505	srp54	100	95.437	Poecilia_reticulata
ENSACAG00000002103	-	100	93.452	ENSPPYG00000005739	SRP54	100	93.452	Pongo_abelii
ENSACAG00000002103	-	100	94.444	ENSPCAG00000006268	SRP54	100	94.444	Procavia_capensis
ENSACAG00000002103	-	100	96.634	ENSPCOG00000022473	SRP54	100	96.634	Propithecus_coquereli
ENSACAG00000002103	-	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSACAG00000002103	-	100	95.437	ENSPNYG00000009717	srp54	100	95.437	Pundamilia_nyererei
ENSACAG00000002103	-	100	95.635	ENSPNAG00000008544	srp54	100	95.635	Pygocentrus_nattereri
ENSACAG00000002103	-	100	98.214	ENSRNOG00000032776	Srp54a	100	98.214	Rattus_norvegicus
ENSACAG00000002103	-	100	98.611	ENSRROG00000041292	SRP54	100	98.611	Rhinopithecus_roxellana
ENSACAG00000002103	-	86	52.834	YPR088C	SRP54	95	48.276	Saccharomyces_cerevisiae
ENSACAG00000002103	-	94	98.523	ENSSBOG00000035145	SRP54	100	98.523	Saimiri_boliviensis_boliviensis
ENSACAG00000002103	-	68	98.834	ENSSHAG00000000671	SRP54	100	98.834	Sarcophilus_harrisii
ENSACAG00000002103	-	100	95.635	ENSSFOG00015013920	srp54	100	95.635	Scleropages_formosus
ENSACAG00000002103	-	100	89.326	ENSSMAG00000002441	srp54	100	89.326	Scophthalmus_maximus
ENSACAG00000002103	-	100	95.040	ENSSDUG00000018586	srp54	100	95.040	Seriola_dumerili
ENSACAG00000002103	-	100	94.841	ENSSLDG00000010476	srp54	100	94.841	Seriola_lalandi_dorsalis
ENSACAG00000002103	-	100	98.611	ENSSARG00000002744	SRP54	100	98.611	Sorex_araneus
ENSACAG00000002103	-	100	99.405	ENSSPUG00000013101	SRP54	100	99.405	Sphenodon_punctatus
ENSACAG00000002103	-	100	95.238	ENSSPAG00000002354	srp54	100	95.238	Stegastes_partitus
ENSACAG00000002103	-	100	98.611	ENSSSCG00000001955	SRP54	100	98.611	Sus_scrofa
ENSACAG00000002103	-	94	98.945	ENSTGUG00000011945	-	95	98.945	Taeniopygia_guttata
ENSACAG00000002103	-	100	94.444	ENSTRUG00000007057	srp54	100	94.444	Takifugu_rubripes
ENSACAG00000002103	-	100	94.048	ENSTNIG00000002589	srp54	100	94.048	Tetraodon_nigroviridis
ENSACAG00000002103	-	89	90.157	ENSTBEG00000011409	SRP54	100	90.157	Tupaia_belangeri
ENSACAG00000002103	-	100	88.492	ENSTTRG00000000928	SRP54	100	88.492	Tursiops_truncatus
ENSACAG00000002103	-	52	98.855	ENSUAMG00000012385	SRP54	100	98.855	Ursus_americanus
ENSACAG00000002103	-	100	98.611	ENSUMAG00000011234	SRP54	100	98.611	Ursus_maritimus
ENSACAG00000002103	-	94	98.312	ENSVPAG00000005668	SRP54	100	98.312	Vicugna_pacos
ENSACAG00000002103	-	100	98.611	ENSVVUG00000019962	SRP54	100	98.611	Vulpes_vulpes
ENSACAG00000002103	-	100	81.657	ENSXETG00000012290	srp54	100	81.657	Xenopus_tropicalis
ENSACAG00000002103	-	88	94.808	ENSXCOG00000004658	srp54	96	94.808	Xiphophorus_couchianus
ENSACAG00000002103	-	100	95.437	ENSXMAG00000018315	srp54	100	95.437	Xiphophorus_maculatus