EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACAG00000002544 (Gene tree)
Gene ID
100556539
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Anolis_carolinensis
Status
putative
Strand
Plus strand
Length
9716 bases
Position
chrGL343481.1:234483-244198
Accession
100556539
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACAP00000002571PABPPF00658.184e-3111
ENSACAP00000002571RRM_5PF13893.63.5e-0812
ENSACAP00000002571RRM_5PF13893.63.5e-0822
ENSACAP00000002571RRM_1PF00076.223.5e-6813
ENSACAP00000002571RRM_1PF00076.223.5e-6823
ENSACAP00000002571RRM_1PF00076.223.5e-6833
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACAT00000002636PABPC4-2012338XM_008120584ENSACAP00000002571558 (aa)XP_008118791H9G6I5
Gene Model
Click here to download ENSACAG00000002544's gene model file
Pathways
Pathway IDPathway NameSource
acs03013RNA transportKEGG
acs03015mRNA surveillance pathwayKEGG
acs03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000002544's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACAG00000002544PABPC45034.940ENSACAG00000004527ELAVL48734.940
ENSACAG00000002544PABPC49868.873ENSACAG00000011841PABPC1L9768.873
ENSACAG00000002544PABPC49972.529ENSACAG00000016470PABPC19872.529
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACAG00000002544PABPC410090.161ENSG00000090621PABPC498100.000Homo_sapiens
ENSACAG00000002544PABPC49984.050ENSAPOG00000001161pabpc49884.752Acanthochromis_polyacanthus
ENSACAG00000002544PABPC49952.518ENSAMEG00000015083-8852.518Ailuropoda_melanoleuca
ENSACAG00000002544PABPC410085.544ENSAMEG00000011535-9985.544Ailuropoda_melanoleuca
ENSACAG00000002544PABPC410084.574ENSACIG00000023343pabpc49885.284Amphilophus_citrinellus
ENSACAG00000002544PABPC49984.409ENSAOCG00000021529pabpc49885.106Amphiprion_ocellaris
ENSACAG00000002544PABPC49984.409ENSAPEG00000019196pabpc49885.106Amphiprion_percula
ENSACAG00000002544PABPC49984.079ENSATEG00000007402pabpc49884.956Anabas_testudineus
ENSACAG00000002544PABPC410095.528ENSAPLG00000009729-10095.528Anas_platyrhynchos
ENSACAG00000002544PABPC410090.161ENSANAG00000025079PABPC49990.161Aotus_nancymaae
ENSACAG00000002544PABPC410084.220ENSACLG00000019558pabpc49884.929Astatotilapia_calliptera
ENSACAG00000002544PABPC410079.715ENSAMXG00000018779pabpc49880.427Astyanax_mexicanus
ENSACAG00000002544PABPC410086.213ENSBTAG00000017125PABPC49986.736Bos_taurus
ENSACAG00000002544PABPC45290.722ENSBTAG00000048536-8690.722Bos_taurus
ENSACAG00000002544PABPC410090.161ENSCJAG00000002512-9990.161Callithrix_jacchus
ENSACAG00000002544PABPC47576.894ENSCJAG00000045953-9776.894Callithrix_jacchus
ENSACAG00000002544PABPC410089.982ENSCAFG00000003081PABPC49989.982Canis_familiaris
ENSACAG00000002544PABPC410085.544ENSCAFG00020004161PABPC49985.544Canis_lupus_dingo
ENSACAG00000002544PABPC410069.056ENSCHIG00000023385-9869.056Capra_hircus
ENSACAG00000002544PABPC410085.884ENSCHIG00000019398-9985.884Capra_hircus
ENSACAG00000002544PABPC410090.161ENSTSYG00000006532PABPC49990.161Carlito_syrichta
ENSACAG00000002544PABPC410090.161ENSCAPG00000015984PABPC49990.161Cavia_aperea
ENSACAG00000002544PABPC410090.519ENSCPOG00000009552PABPC49990.519Cavia_porcellus
ENSACAG00000002544PABPC410089.982ENSCCAG00000037306PABPC49989.982Cebus_capucinus
ENSACAG00000002544PABPC410090.161ENSCATG00000042164PABPC49990.161Cercocebus_atys
ENSACAG00000002544PABPC410090.161ENSCLAG00000011899PABPC49990.161Chinchilla_lanigera
ENSACAG00000002544PABPC410085.714ENSCSAG00000001135PABPC49985.714Chlorocebus_sabaeus
ENSACAG00000002544PABPC48591.153ENSCHOG00000005327PABPC48091.153Choloepus_hoffmanni
ENSACAG00000002544PABPC410095.170ENSCPBG00000001038PABPC49995.170Chrysemys_picta_bellii
ENSACAG00000002544PABPC410090.161ENSCANG00000034177PABPC49990.161Colobus_angolensis_palliatus
ENSACAG00000002544PABPC49987.477ENSCGRG00001018166Pabpc49986.702Cricetulus_griseus_chok1gshd
ENSACAG00000002544PABPC49987.477ENSCGRG00000009777Pabpc410086.702Cricetulus_griseus_crigri
ENSACAG00000002544PABPC49984.192ENSCSEG00000000130pabpc49884.902Cynoglossus_semilaevis
ENSACAG00000002544PABPC410083.865ENSCVAG00000019246pabpc49985.461Cyprinodon_variegatus
ENSACAG00000002544PABPC49986.762ENSDARG00000059259pabpc49987.500Danio_rerio
ENSACAG00000002544PABPC410090.161ENSDNOG00000018444-9990.161Dasypus_novemcinctus
ENSACAG00000002544PABPC410087.063ENSDORG00000011581Pabpc49987.063Dipodomys_ordii
ENSACAG00000002544PABPC49859.450ENSETEG00000009172-9959.450Echinops_telfairi
ENSACAG00000002544PABPC49681.911ENSETEG00000018453-7483.130Echinops_telfairi
ENSACAG00000002544PABPC49776.277ENSEBUG00000013782pabpc49976.114Eptatretus_burgeri
ENSACAG00000002544PABPC49975.224ENSEBUG00000000992pabpc49875.224Eptatretus_burgeri
ENSACAG00000002544PABPC410090.161ENSEASG00005014119PABPC49985.714Equus_asinus_asinus
ENSACAG00000002544PABPC410090.161ENSECAG00000009396PABPC49985.714Equus_caballus
ENSACAG00000002544PABPC49883.507ENSEEUG00000002962PABPC49983.163Erinaceus_europaeus
ENSACAG00000002544PABPC49984.973ENSELUG00000003195pabpc49885.461Esox_lucius
ENSACAG00000002544PABPC410089.982ENSFCAG00000015254-9989.982Felis_catus
ENSACAG00000002544PABPC410094.812ENSFALG00000000543PABPC49994.812Ficedula_albicollis
ENSACAG00000002544PABPC410085.714ENSFDAG00000020016-9985.714Fukomys_damarensis
ENSACAG00000002544PABPC49957.569ENSFDAG00000010581-9954.991Fukomys_damarensis
ENSACAG00000002544PABPC410084.574ENSFHEG00000007548pabpc49885.284Fundulus_heteroclitus
ENSACAG00000002544PABPC410083.156ENSGMOG00000019025pabpc49883.865Gadus_morhua
ENSACAG00000002544PABPC410095.170ENSGALG00000003800PABPC49995.170Gallus_gallus
ENSACAG00000002544PABPC410092.328ENSGAFG00000018195pabpc49897.458Gambusia_affinis
ENSACAG00000002544PABPC49982.092ENSGACG00000007179pabpc49883.333Gasterosteus_aculeatus
ENSACAG00000002544PABPC410095.528ENSGAGG00000001888PABPC49995.528Gopherus_agassizii
ENSACAG00000002544PABPC410090.161ENSGGOG00000004002PABPC49990.161Gorilla_gorilla
ENSACAG00000002544PABPC410084.043ENSHBUG00000020206pabpc49884.752Haplochromis_burtoni
ENSACAG00000002544PABPC410090.340ENSHGLG00000011162PABPC49990.340Heterocephalus_glaber_female
ENSACAG00000002544PABPC410090.340ENSHGLG00100001580PABPC49990.340Heterocephalus_glaber_male
ENSACAG00000002544PABPC49984.698ENSHCOG00000012694pabpc49885.409Hippocampus_comes
ENSACAG00000002544PABPC49884.239ENSIPUG00000016620pabpc49984.397Ictalurus_punctatus
ENSACAG00000002544PABPC410088.193ENSSTOG00000010416PABPC49988.193Ictidomys_tridecemlineatus
ENSACAG00000002544PABPC410084.965ENSJJAG00000007781Pabpc49985.315Jaculus_jaculus
ENSACAG00000002544PABPC410083.717ENSKMAG00000013597pabpc49884.425Kryptolebias_marmoratus
ENSACAG00000002544PABPC410083.717ENSLBEG00000013654pabpc49884.425Labrus_bergylta
ENSACAG00000002544PABPC410090.053ENSLACG00000011907PABPC49990.053Latimeria_chalumnae
ENSACAG00000002544PABPC410087.456ENSLOCG00000001877pabpc49988.339Lepisosteus_oculatus
ENSACAG00000002544PABPC410087.835ENSLAFG00000000151PABPC49987.835Loxodonta_africana
ENSACAG00000002544PABPC410090.161ENSMFAG00000041481PABPC49990.161Macaca_fascicularis
ENSACAG00000002544PABPC410085.714ENSMMUG00000007497PABPC49985.714Macaca_mulatta
ENSACAG00000002544PABPC410089.982ENSMNEG00000043054PABPC49989.982Macaca_nemestrina
ENSACAG00000002544PABPC410090.161ENSMLEG00000040716PABPC49990.161Mandrillus_leucophaeus
ENSACAG00000002544PABPC49983.871ENSMAMG00000010025pabpc49884.929Mastacembelus_armatus
ENSACAG00000002544PABPC410084.043ENSMZEG00005006141pabpc49884.752Maylandia_zebra
ENSACAG00000002544PABPC410091.034ENSMGAG00000005408PABPC49991.034Meleagris_gallopavo
ENSACAG00000002544PABPC46783.654ENSMAUG00000001295-9783.654Mesocricetus_auratus
ENSACAG00000002544PABPC45581.416ENSMAUG00000004089-8881.416Mesocricetus_auratus
ENSACAG00000002544PABPC46894.792ENSMAUG00000019763-6589.394Mesocricetus_auratus
ENSACAG00000002544PABPC48787.526ENSMICG00000016633-9790.213Microcebus_murinus
ENSACAG00000002544PABPC410078.114ENSMICG00000036729-9978.114Microcebus_murinus
ENSACAG00000002544PABPC49990.416ENSMOCG00000006763Pabpc49989.624Microtus_ochrogaster
ENSACAG00000002544PABPC410081.283ENSMMOG00000002363pabpc49882.740Mola_mola
ENSACAG00000002544PABPC45675.241ENSMODG00000018051-8975.241Monodelphis_domestica
ENSACAG00000002544PABPC410088.034ENSMODG00000017657-9988.034Monodelphis_domestica
ENSACAG00000002544PABPC49983.393ENSMALG00000011017pabpc49884.099Monopterus_albus
ENSACAG00000002544PABPC410075.699MGP_CAROLIEiJ_G0024864-9975.699Mus_caroli
ENSACAG00000002544PABPC410085.204MGP_CAROLIEiJ_G0026435-10097.938Mus_caroli
ENSACAG00000002544PABPC410089.267ENSMUSG00000011257Pabpc49896.907Mus_musculus
ENSACAG00000002544PABPC410084.524MGP_PahariEiJ_G0028765Pabpc410097.938Mus_pahari
ENSACAG00000002544PABPC410074.826MGP_SPRETEiJ_G0027415Pabpc410096.907Mus_spretus
ENSACAG00000002544PABPC49649.628ENSMPUG00000006836-9049.628Mustela_putorius_furo
ENSACAG00000002544PABPC410085.544ENSMPUG00000014414-9985.544Mustela_putorius_furo
ENSACAG00000002544PABPC410088.014ENSMLUG00000012068PABPC49988.014Myotis_lucifugus
ENSACAG00000002544PABPC410087.657ENSNGAG00000018292Pabpc49987.657Nannospalax_galili
ENSACAG00000002544PABPC45697.260ENSNBRG00000009708pabpc49897.260Neolamprologus_brichardi
ENSACAG00000002544PABPC46088.136ENSNBRG00000010047-7588.136Neolamprologus_brichardi
ENSACAG00000002544PABPC410090.161ENSNLEG00000011928PABPC49990.161Nomascus_leucogenys
ENSACAG00000002544PABPC48492.063ENSOPRG00000011984PABPC48692.063Ochotona_princeps
ENSACAG00000002544PABPC410089.803ENSODEG00000006592-9989.803Octodon_degus
ENSACAG00000002544PABPC45381.373ENSODEG00000013457-9981.373Octodon_degus
ENSACAG00000002544PABPC49680.761ENSODEG00000017434-9981.395Octodon_degus
ENSACAG00000002544PABPC410084.220ENSONIG00000008176pabpc49884.929Oreochromis_niloticus
ENSACAG00000002544PABPC410094.812ENSOANG00000010001PABPC49994.812Ornithorhynchus_anatinus
ENSACAG00000002544PABPC49585.561ENSOCUG00000000562PABPC48885.561Oryctolagus_cuniculus
ENSACAG00000002544PABPC49992.885ENSORLG00000017479pabpc49892.885Oryzias_latipes
ENSACAG00000002544PABPC49992.885ENSORLG00020018644pabpc49892.885Oryzias_latipes_hni
ENSACAG00000002544PABPC49992.885ENSORLG00015015042pabpc49892.885Oryzias_latipes_hsok
ENSACAG00000002544PABPC49984.050ENSOMEG00000014410pabpc49884.248Oryzias_melastigma
ENSACAG00000002544PABPC410086.087ENSOGAG00000004067PABPC49986.609Otolemur_garnettii
ENSACAG00000002544PABPC410085.884ENSOARG00000020060PABPC49985.884Ovis_aries
ENSACAG00000002544PABPC410090.161ENSPPAG00000043625PABPC49990.161Pan_paniscus
ENSACAG00000002544PABPC410089.982ENSPPRG00000024727PABPC49989.982Panthera_pardus
ENSACAG00000002544PABPC410089.982ENSPTIG00000005829PABPC49989.982Panthera_tigris_altaica
ENSACAG00000002544PABPC410090.161ENSPTRG00000000573PABPC49990.161Pan_troglodytes
ENSACAG00000002544PABPC410090.161ENSPANG00000009484PABPC49990.161Papio_anubis
ENSACAG00000002544PABPC49985.765ENSPKIG00000025356pabpc49886.477Paramormyrops_kingsleyae
ENSACAG00000002544PABPC410095.349ENSPSIG00000016892PABPC49995.349Pelodiscus_sinensis
ENSACAG00000002544PABPC410081.851ENSPMGG00000009073pabpc49881.851Periophthalmus_magnuspinnatus
ENSACAG00000002544PABPC410084.014ENSPEMG00000024193-9984.014Peromyscus_maniculatus_bairdii
ENSACAG00000002544PABPC410089.267ENSPEMG00000023569-9989.267Peromyscus_maniculatus_bairdii
ENSACAG00000002544PABPC48772.530ENSPMAG00000002836pabpc49973.518Petromyzon_marinus
ENSACAG00000002544PABPC49272.131ENSPMAG00000007885pabpc49971.912Petromyzon_marinus
ENSACAG00000002544PABPC410095.722ENSPCIG00000020674PABPC49995.722Phascolarctos_cinereus
ENSACAG00000002544PABPC410083.688ENSPFOG00000002682pabpc49885.106Poecilia_formosa
ENSACAG00000002544PABPC410083.688ENSPLAG00000010112pabpc49885.106Poecilia_latipinna
ENSACAG00000002544PABPC49984.409ENSPMEG00000019739pabpc49885.106Poecilia_mexicana
ENSACAG00000002544PABPC410084.574ENSPREG00000001589pabpc49885.284Poecilia_reticulata
ENSACAG00000002544PABPC410085.714ENSPPYG00000001506PABPC49985.714Pongo_abelii
ENSACAG00000002544PABPC410080.272ENSPCAG00000003341PABPC49980.272Procavia_capensis
ENSACAG00000002544PABPC410077.686ENSPCOG00000025882-9972.855Propithecus_coquereli
ENSACAG00000002544PABPC410089.643ENSPCOG00000023725-9990.179Propithecus_coquereli
ENSACAG00000002544PABPC410085.544ENSPVAG00000002187PABPC49985.544Pteropus_vampyrus
ENSACAG00000002544PABPC410084.220ENSPNYG00000006134pabpc49884.929Pundamilia_nyererei
ENSACAG00000002544PABPC410085.185ENSPNAG00000024355pabpc49985.891Pygocentrus_nattereri
ENSACAG00000002544PABPC410086.189ENSRNOG00000015642Pabpc49986.189Rattus_norvegicus
ENSACAG00000002544PABPC410084.266ENSRNOG00000028592AABR07035074.19984.266Rattus_norvegicus
ENSACAG00000002544PABPC410090.161ENSRBIG00000039761PABPC49990.161Rhinopithecus_bieti
ENSACAG00000002544PABPC410090.161ENSRROG00000033355PABPC49990.161Rhinopithecus_roxellana
ENSACAG00000002544PABPC410089.982ENSSBOG00000026193PABPC49989.982Saimiri_boliviensis_boliviensis
ENSACAG00000002544PABPC410091.950ENSSHAG00000018139PABPC49991.950Sarcophilus_harrisii
ENSACAG00000002544PABPC49986.833ENSSFOG00015023514pabpc49986.833Scleropages_formosus
ENSACAG00000002544PABPC49983.630ENSSMAG00000009007pabpc49885.053Scophthalmus_maximus
ENSACAG00000002544PABPC49984.588ENSSDUG00000012683pabpc49884.574Seriola_dumerili
ENSACAG00000002544PABPC49984.588ENSSLDG00000013025pabpc49884.574Seriola_lalandi_dorsalis
ENSACAG00000002544PABPC410084.864ENSSARG00000000310PABPC49384.864Sorex_araneus
ENSACAG00000002544PABPC410093.023ENSSPUG00000003204PABPC49993.023Sphenodon_punctatus
ENSACAG00000002544PABPC49984.050ENSSPAG00000009252pabpc49884.752Stegastes_partitus
ENSACAG00000002544PABPC410089.982ENSSSCG00000003660-9989.982Sus_scrofa
ENSACAG00000002544PABPC410044.991ENSSSCG00000036170-9347.984Sus_scrofa
ENSACAG00000002544PABPC410088.814ENSTGUG00000001266PABPC49990.169Taeniopygia_guttata
ENSACAG00000002544PABPC49983.779ENSTRUG00000005907pabpc49884.492Takifugu_rubripes
ENSACAG00000002544PABPC49979.751ENSTNIG00000016902pabpc49879.751Tetraodon_nigroviridis
ENSACAG00000002544PABPC410076.020ENSTBEG00000009035PABPC49976.020Tupaia_belangeri
ENSACAG00000002544PABPC410070.058ENSTTRG00000014340PABPC49974.490Tursiops_truncatus
ENSACAG00000002544PABPC410089.982ENSUAMG00000000303PABPC49989.982Ursus_americanus
ENSACAG00000002544PABPC410090.617ENSUMAG00000019585PABPC49990.617Ursus_maritimus
ENSACAG00000002544PABPC47183.486ENSVPAG00000010041PABPC45483.486Vicugna_pacos
ENSACAG00000002544PABPC410089.982ENSVVUG00000005215PABPC49989.982Vulpes_vulpes
ENSACAG00000002544PABPC410086.047ENSXETG00000010946pabpc49986.047Xenopus_tropicalis
ENSACAG00000002544PABPC459100.000ENSXETG00000027221-98100.000Xenopus_tropicalis
ENSACAG00000002544PABPC410091.270ENSXCOG00000013190pabpc49692.925Xiphophorus_couchianus
ENSACAG00000002544PABPC410084.397ENSXMAG00000019007pabpc49885.106Xiphophorus_maculatus

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