EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000002545 (Gene tree)
Gene ID: 100557265
Gene Symbol: -
Alias: -
Full Name: exosome component 10
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 7648 bases
Position: chrAAWZ02038788:2764-10411
Accession: 100557265
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000002519	HRDC	PF00570.23	4.1e-10	1	1
ENSACAP00000002519	DNA_pol_A_exo1	PF01612.20	8.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000002584	-	1164	XM_003230597	ENSACAP00000002519	333 (aa)	XP_003230645	H9G6F9

Gene Model

Click here to download ENSACAG00000002545's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000002545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000002545	-	100	81.138	ENSCATG00000039000	EXOSC10	50	81.138	Cercocebus_atys
ENSACAG00000002545	-	74	60.000	ENSCING00000002381	-	85	60.000	Ciona_intestinalis
ENSACAG00000002545	-	59	48.485	ENSCING00000018374	-	73	48.485	Ciona_intestinalis
ENSACAG00000002545	-	93	50.473	ENSCSAVG00000009049	-	54	50.473	Ciona_savignyi
ENSACAG00000002545	-	100	79.641	ENSMAUG00000019261	Exosc10	54	79.641	Mesocricetus_auratus
ENSACAG00000002545	-	100	79.341	ENSMOCG00000016509	Exosc10	54	79.341	Microtus_ochrogaster
ENSACAG00000002545	-	100	79.341	MGP_CAROLIEiJ_G0026802	Exosc10	54	79.341	Mus_caroli
ENSACAG00000002545	-	100	79.341	ENSMUSG00000017264	Exosc10	54	79.341	Mus_musculus
ENSACAG00000002545	-	100	79.641	MGP_PahariEiJ_G0029150	Exosc10	54	79.641	Mus_pahari
ENSACAG00000002545	-	100	79.341	MGP_SPRETEiJ_G0027795	Exosc10	54	79.341	Mus_spretus
ENSACAG00000002545	-	100	69.670	ENSPMGG00000022241	exosc10	56	69.670	Periophthalmus_magnuspinnatus
ENSACAG00000002545	-	64	64.953	ENSPMAG00000006451	-	100	64.953	Petromyzon_marinus
ENSACAG00000002545	-	64	59.459	ENSPMAG00000000112	-	100	59.459	Petromyzon_marinus
ENSACAG00000002545	-	64	65.581	ENSPMAG00000006448	-	100	65.581	Petromyzon_marinus
ENSACAG00000002545	-	92	54.902	ENSPMAG00000006909	exosc10	62	54.902	Petromyzon_marinus
ENSACAG00000002545	-	64	63.551	ENSPMAG00000009696	-	100	63.551	Petromyzon_marinus
ENSACAG00000002545	-	73	59.144	ENSPMAG00000006928	-	99	59.144	Petromyzon_marinus
ENSACAG00000002545	-	99	80.060	ENSPCIG00000004840	EXOSC10	54	80.060	Phascolarctos_cinereus
ENSACAG00000002545	-	100	83.784	ENSSPUG00000006844	EXOSC10	54	84.404	Sphenodon_punctatus