EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000002569 (Gene tree)
Gene ID: 100551800
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 45666 bases
Position: chr3:145613751-145659416
Accession: 100551800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000002626	RRM_1	PF00076.22	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000002692	SCAF4-201	3474	XM_008107608	ENSACAP00000002626	1157 (aa)	XP_008105815	G1KB24

Gene Model

Click here to download ENSACAG00000002569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000002569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000002569	SCAF4	52	84.146	ENSG00000156304	SCAF4	96	69.161	Homo_sapiens
ENSACAG00000002569	SCAF4	74	49.227	ENSAPOG00000002946	scaf4a	62	48.655	Acanthochromis_polyacanthus
ENSACAG00000002569	SCAF4	68	49.485	ENSAOCG00000000615	scaf4a	54	62.555	Amphiprion_ocellaris
ENSACAG00000002569	SCAF4	62	57.194	ENSAOCG00000010433	scaf4b	62	62.319	Amphiprion_ocellaris
ENSACAG00000002569	SCAF4	62	57.194	ENSAPEG00000010913	scaf4b	66	59.574	Amphiprion_percula
ENSACAG00000002569	SCAF4	68	49.485	ENSAPEG00000021229	scaf4a	54	62.115	Amphiprion_percula
ENSACAG00000002569	SCAF4	89	78.072	ENSAPLG00000002509	SCAF4	94	78.072	Anas_platyrhynchos
ENSACAG00000002569	SCAF4	52	84.146	ENSANAG00000037494	SCAF4	96	69.231	Aotus_nancymaae
ENSACAG00000002569	SCAF4	80	53.902	ENSAMXG00000008585	scaf4a	53	71.277	Astyanax_mexicanus
ENSACAG00000002569	SCAF4	51	83.537	ENSBTAG00000018855	SCAF4	95	71.394	Bos_taurus
ENSACAG00000002569	SCAF4	59	79.757	ENSCJAG00000008993	SCAF4	96	69.388	Callithrix_jacchus
ENSACAG00000002569	SCAF4	51	84.146	ENSCAFG00000008863	SCAF4	99	64.677	Canis_familiaris
ENSACAG00000002569	SCAF4	52	83.537	ENSCHIG00000008385	SCAF4	100	63.502	Capra_hircus
ENSACAG00000002569	SCAF4	51	84.146	ENSTSYG00000011344	SCAF4	99	62.899	Carlito_syrichta
ENSACAG00000002569	SCAF4	51	84.756	ENSCPOG00000012443	SCAF4	95	69.464	Cavia_porcellus
ENSACAG00000002569	SCAF4	52	84.146	ENSCCAG00000033727	SCAF4	97	72.195	Cebus_capucinus
ENSACAG00000002569	SCAF4	52	84.146	ENSCATG00000030379	SCAF4	96	69.555	Cercocebus_atys
ENSACAG00000002569	SCAF4	51	84.146	ENSCLAG00000006298	SCAF4	95	69.762	Chinchilla_lanigera
ENSACAG00000002569	SCAF4	52	84.146	ENSCSAG00000009438	SCAF4	96	68.623	Chlorocebus_sabaeus
ENSACAG00000002569	SCAF4	52	84.146	ENSCANG00000029847	SCAF4	96	68.707	Colobus_angolensis_palliatus
ENSACAG00000002569	SCAF4	76	54.115	ENSDARG00000077093	scaf4a	50	68.817	Danio_rerio
ENSACAG00000002569	SCAF4	53	80.925	ENSDNOG00000019014	SCAF4	90	66.765	Dasypus_novemcinctus
ENSACAG00000002569	SCAF4	53	68.208	ENSETEG00000000583	SCAF4	95	63.867	Echinops_telfairi
ENSACAG00000002569	SCAF4	52	84.146	ENSEASG00005007756	SCAF4	100	63.718	Equus_asinus_asinus
ENSACAG00000002569	SCAF4	52	84.146	ENSECAG00000014248	SCAF4	100	63.584	Equus_caballus
ENSACAG00000002569	SCAF4	52	84.146	ENSFCAG00000002228	SCAF4	100	63.934	Felis_catus
ENSACAG00000002569	SCAF4	50	82.456	ENSFDAG00000017780	SCAF4	95	65.786	Fukomys_damarensis
ENSACAG00000002569	SCAF4	57	50.865	ENSGMOG00000018812	SCAF8	51	57.838	Gadus_morhua
ENSACAG00000002569	SCAF4	95	76.867	ENSGALG00000033965	SCAF4	94	77.404	Gallus_gallus
ENSACAG00000002569	SCAF4	82	69.318	ENSGGOG00000015557	SCAF4	100	65.147	Gorilla_gorilla
ENSACAG00000002569	SCAF4	51	84.756	ENSHGLG00000010582	SCAF4	95	68.736	Heterocephalus_glaber_female
ENSACAG00000002569	SCAF4	88	63.488	ENSJJAG00000019447	Scaf4	95	69.976	Jaculus_jaculus
ENSACAG00000002569	SCAF4	75	49.637	ENSLBEG00000014675	scaf4a	90	58.685	Labrus_bergylta
ENSACAG00000002569	SCAF4	81	65.470	ENSLACG00000013913	SCAF4	93	63.797	Latimeria_chalumnae
ENSACAG00000002569	SCAF4	86	61.538	ENSLOCG00000009162	scaf4a	93	60.373	Lepisosteus_oculatus
ENSACAG00000002569	SCAF4	52	82.081	ENSLAFG00000010710	SCAF4	100	66.257	Loxodonta_africana
ENSACAG00000002569	SCAF4	52	84.146	ENSMFAG00000037668	SCAF4	95	69.838	Macaca_fascicularis
ENSACAG00000002569	SCAF4	52	84.146	ENSMMUG00000001712	SCAF4	95	69.838	Macaca_mulatta
ENSACAG00000002569	SCAF4	52	84.146	ENSMNEG00000032966	SCAF4	95	69.838	Macaca_nemestrina
ENSACAG00000002569	SCAF4	51	84.146	ENSMLEG00000039674	SCAF4	96	69.838	Mandrillus_leucophaeus
ENSACAG00000002569	SCAF4	72	49.275	ENSMZEG00005024349	scaf4a	50	66.960	Maylandia_zebra
ENSACAG00000002569	SCAF4	99	69.007	ENSMGAG00000014515	SCAF4	95	77.831	Meleagris_gallopavo
ENSACAG00000002569	SCAF4	50	82.081	ENSMAUG00000013307	Scaf4	96	66.511	Mesocricetus_auratus
ENSACAG00000002569	SCAF4	52	84.146	ENSMICG00000005256	SCAF4	96	69.930	Microcebus_murinus
ENSACAG00000002569	SCAF4	90	69.773	ENSMODG00000021040	SCAF4	95	69.773	Monodelphis_domestica
ENSACAG00000002569	SCAF4	55	61.356	ENSMALG00000013825	scaf4a	80	77.124	Monopterus_albus
ENSACAG00000002569	SCAF4	61	67.458	ENSMPUG00000001078	SCAF4	99	64.292	Mustela_putorius_furo
ENSACAG00000002569	SCAF4	62	65.489	ENSMLUG00000011472	SCAF4	99	58.590	Myotis_lucifugus
ENSACAG00000002569	SCAF4	50	84.146	ENSNGAG00000005214	Scaf4	94	73.077	Nannospalax_galili
ENSACAG00000002569	SCAF4	52	84.146	ENSNLEG00000003569	SCAF4	100	63.458	Nomascus_leucogenys
ENSACAG00000002569	SCAF4	73	68.790	ENSOPRG00000007016	SCAF4	78	68.677	Ochotona_princeps
ENSACAG00000002569	SCAF4	74	53.095	ENSONIG00000004687	scaf4a	62	65.106	Oreochromis_niloticus
ENSACAG00000002569	SCAF4	52	85.000	ENSOCUG00000008336	SCAF4	58	77.729	Oryctolagus_cuniculus
ENSACAG00000002569	SCAF4	51	54.737	ENSORLG00000003420	scaf4b	59	64.444	Oryzias_latipes
ENSACAG00000002569	SCAF4	51	84.146	ENSOGAG00000014653	SCAF4	89	66.079	Otolemur_garnettii
ENSACAG00000002569	SCAF4	51	83.537	ENSOARG00000013894	SCAF4	98	63.839	Ovis_aries
ENSACAG00000002569	SCAF4	52	84.146	ENSPPAG00000028535	SCAF4	96	69.161	Pan_paniscus
ENSACAG00000002569	SCAF4	51	84.146	ENSPPRG00000000635	SCAF4	100	64.404	Panthera_pardus
ENSACAG00000002569	SCAF4	51	84.146	ENSPTIG00000021578	SCAF4	99	60.425	Panthera_tigris_altaica
ENSACAG00000002569	SCAF4	52	84.146	ENSPTRG00000013848	SCAF4	96	69.161	Pan_troglodytes
ENSACAG00000002569	SCAF4	52	84.146	ENSPANG00000017332	SCAF4	96	68.707	Papio_anubis
ENSACAG00000002569	SCAF4	57	67.886	ENSPKIG00000022408	scaf4a	87	68.722	Paramormyrops_kingsleyae
ENSACAG00000002569	SCAF4	89	73.721	ENSPSIG00000014242	SCAF4	97	68.868	Pelodiscus_sinensis
ENSACAG00000002569	SCAF4	54	59.231	ENSPMGG00000016741	scaf4a	78	75.974	Periophthalmus_magnuspinnatus
ENSACAG00000002569	SCAF4	55	79.724	ENSPCIG00000028183	SCAF4	91	64.801	Phascolarctos_cinereus
ENSACAG00000002569	SCAF4	70	53.385	ENSPFOG00000017156	scaf4a	57	58.962	Poecilia_formosa
ENSACAG00000002569	SCAF4	55	58.148	ENSPLAG00000001972	scaf4a	67	61.135	Poecilia_latipinna
ENSACAG00000002569	SCAF4	52	84.146	ENSPPYG00000011355	SCAF4	96	70.093	Pongo_abelii
ENSACAG00000002569	SCAF4	66	87.742	ENSPCAG00000009998	SCAF4	94	79.038	Procavia_capensis
ENSACAG00000002569	SCAF4	52	84.146	ENSPCOG00000018710	SCAF4	95	70.163	Propithecus_coquereli
ENSACAG00000002569	SCAF4	52	84.756	ENSPVAG00000005220	SCAF4	100	64.421	Pteropus_vampyrus
ENSACAG00000002569	SCAF4	52	80.226	ENSRBIG00000040007	SCAF4	94	70.070	Rhinopithecus_bieti
ENSACAG00000002569	SCAF4	52	84.146	ENSRROG00000029488	SCAF4	96	68.707	Rhinopithecus_roxellana
ENSACAG00000002569	SCAF4	90	69.091	ENSSHAG00000001581	SCAF4	95	69.136	Sarcophilus_harrisii
ENSACAG00000002569	SCAF4	75	48.960	ENSSFOG00015006338	scaf4a	92	49.687	Scleropages_formosus
ENSACAG00000002569	SCAF4	74	50.000	ENSSDUG00000012918	scaf4a	53	61.842	Seriola_dumerili
ENSACAG00000002569	SCAF4	68	59.140	ENSSLDG00000023152	-	60	60.488	Seriola_lalandi_dorsalis
ENSACAG00000002569	SCAF4	72	52.500	ENSSLDG00000021671	scaf4a	53	61.062	Seriola_lalandi_dorsalis
ENSACAG00000002569	SCAF4	50	87.742	ENSSARG00000009994	SCAF4	96	68.056	Sorex_araneus
ENSACAG00000002569	SCAF4	52	84.146	ENSSSCG00000021023	SCAF4	63	64.994	Sus_scrofa
ENSACAG00000002569	SCAF4	67	77.311	ENSTGUG00000013464	SCAF4	95	75.433	Taeniopygia_guttata
ENSACAG00000002569	SCAF4	55	55.709	ENSTNIG00000009945	scaf4a	57	60.352	Tetraodon_nigroviridis
ENSACAG00000002569	SCAF4	51	84.756	ENSTTRG00000010963	SCAF4	100	63.980	Tursiops_truncatus
ENSACAG00000002569	SCAF4	52	84.756	ENSUAMG00000008860	SCAF4	63	65.584	Ursus_americanus
ENSACAG00000002569	SCAF4	51	84.756	ENSUMAG00000016962	SCAF4	95	72.431	Ursus_maritimus
ENSACAG00000002569	SCAF4	51	84.146	ENSVVUG00000002953	SCAF4	100	64.530	Vulpes_vulpes
ENSACAG00000002569	SCAF4	69	59.080	ENSXETG00000007351	scaf4	67	57.814	Xenopus_tropicalis