EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000002674 (Gene tree)
Gene ID: 100567270
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 19208 bases
Position: chr6:69422393-69441600
Accession: 100567270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000002654	Btz	PF09405.10	3.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000002721	CASC3-201	2246	XM_008113352	ENSACAP00000002654	723 (aa)	XP_008111559	G1KB37

Gene Model

Click here to download ENSACAG00000002674's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03013	RNA transport	KEGG
acs03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000002674's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000002674	CASC3	99	66.758	ENSG00000108349	CASC3	89	77.966	Homo_sapiens
ENSACAG00000002674	CASC3	71	51.603	ENSAPOG00000008467	casc3	68	51.887	Acanthochromis_polyacanthus
ENSACAG00000002674	CASC3	99	67.852	ENSAMEG00000007764	CASC3	91	72.811	Ailuropoda_melanoleuca
ENSACAG00000002674	CASC3	75	55.656	ENSATEG00000017196	casc3	75	52.479	Anabas_testudineus
ENSACAG00000002674	CASC3	88	64.407	ENSANAG00000034820	-	91	65.023	Aotus_nancymaae
ENSACAG00000002674	CASC3	66	82.407	ENSANAG00000031954	-	86	81.720	Aotus_nancymaae
ENSACAG00000002674	CASC3	92	45.384	ENSAMXG00000032452	casc3	94	44.772	Astyanax_mexicanus
ENSACAG00000002674	CASC3	99	68.219	ENSBTAG00000006250	CASC3	91	73.077	Bos_taurus
ENSACAG00000002674	CASC3	99	65.750	ENSCJAG00000016032	CASC3	91	70.706	Callithrix_jacchus
ENSACAG00000002674	CASC3	99	67.442	ENSCAFG00000016141	CASC3	91	72.811	Canis_familiaris
ENSACAG00000002674	CASC3	99	66.530	ENSCAFG00020018882	CASC3	91	71.779	Canis_lupus_dingo
ENSACAG00000002674	CASC3	99	66.804	ENSCHIG00000006338	CASC3	91	71.649	Capra_hircus
ENSACAG00000002674	CASC3	87	73.028	ENSTSYG00000002975	CASC3	89	73.228	Carlito_syrichta
ENSACAG00000002674	CASC3	85	68.910	ENSCAPG00000010514	CASC3	99	69.378	Cavia_aperea
ENSACAG00000002674	CASC3	99	64.039	ENSCPOG00000015139	CASC3	91	69.278	Cavia_porcellus
ENSACAG00000002674	CASC3	88	70.706	ENSCCAG00000033620	CASC3	91	71.626	Cebus_capucinus
ENSACAG00000002674	CASC3	99	66.896	ENSCATG00000033593	CASC3	91	72.265	Cercocebus_atys
ENSACAG00000002674	CASC3	99	65.021	ENSCLAG00000013730	CASC3	91	69.846	Chinchilla_lanigera
ENSACAG00000002674	CASC3	99	66.896	ENSCSAG00000002777	CASC3	91	72.265	Chlorocebus_sabaeus
ENSACAG00000002674	CASC3	98	75.139	ENSCPBG00000004750	CASC3	95	78.730	Chrysemys_picta_bellii
ENSACAG00000002674	CASC3	99	67.308	ENSCANG00000008814	CASC3	91	72.265	Colobus_angolensis_palliatus
ENSACAG00000002674	CASC3	99	66.207	ENSCGRG00001014706	Casc3	99	66.207	Cricetulus_griseus_chok1gshd
ENSACAG00000002674	CASC3	87	71.541	ENSCGRG00000001952	Casc3	96	71.541	Cricetulus_griseus_crigri
ENSACAG00000002674	CASC3	73	50.476	ENSCSEG00000010047	casc3	54	70.504	Cynoglossus_semilaevis
ENSACAG00000002674	CASC3	98	43.602	ENSDARG00000029911	casc3	94	45.232	Danio_rerio
ENSACAG00000002674	CASC3	99	67.350	ENSDNOG00000017249	CASC3	86	72.713	Dasypus_novemcinctus
ENSACAG00000002674	CASC3	99	62.621	ENSETEG00000013720	CASC3	91	67.127	Echinops_telfairi
ENSACAG00000002674	CASC3	87	36.705	ENSEBUG00000010654	casc3	90	35.942	Eptatretus_burgeri
ENSACAG00000002674	CASC3	99	66.939	ENSEASG00005002909	CASC3	91	71.669	Equus_asinus_asinus
ENSACAG00000002674	CASC3	99	67.804	ENSECAG00000019947	CASC3	80	72.811	Equus_caballus
ENSACAG00000002674	CASC3	72	61.869	ENSEEUG00000014253	CASC3	88	67.396	Erinaceus_europaeus
ENSACAG00000002674	CASC3	87	45.148	ENSELUG00000015093	casc3	92	44.444	Esox_lucius
ENSACAG00000002674	CASC3	99	67.715	ENSFCAG00000014998	CASC3	91	72.657	Felis_catus
ENSACAG00000002674	CASC3	86	74.375	ENSFALG00000000412	CASC3	98	73.750	Ficedula_albicollis
ENSACAG00000002674	CASC3	88	67.284	ENSFDAG00000020696	CASC3	97	67.593	Fukomys_damarensis
ENSACAG00000002674	CASC3	87	77.044	ENSGALG00000031813	CASC3	95	76.378	Gallus_gallus
ENSACAG00000002674	CASC3	87	77.273	ENSGAGG00000008432	CASC3	95	78.667	Gopherus_agassizii
ENSACAG00000002674	CASC3	99	66.393	ENSGGOG00000005067	CASC3	91	71.957	Gorilla_gorilla
ENSACAG00000002674	CASC3	86	71.136	ENSHGLG00000012117	CASC3	91	70.353	Heterocephalus_glaber_female
ENSACAG00000002674	CASC3	87	71.272	ENSHGLG00100002268	CASC3	99	70.958	Heterocephalus_glaber_male
ENSACAG00000002674	CASC3	98	45.594	ENSIPUG00000002679	casc3	92	47.051	Ictalurus_punctatus
ENSACAG00000002674	CASC3	99	67.031	ENSSTOG00000006374	CASC3	91	71.736	Ictidomys_tridecemlineatus
ENSACAG00000002674	CASC3	89	70.606	ENSJJAG00000023525	Casc3	91	71.385	Jaculus_jaculus
ENSACAG00000002674	CASC3	56	79.787	ENSKMAG00000019507	casc3	60	71.818	Kryptolebias_marmoratus
ENSACAG00000002674	CASC3	61	68.939	ENSLBEG00000005435	casc3	53	67.626	Labrus_bergylta
ENSACAG00000002674	CASC3	85	62.500	ENSLACG00000013200	CASC3	89	61.810	Latimeria_chalumnae
ENSACAG00000002674	CASC3	64	63.424	ENSLOCG00000013518	casc3	61	68.396	Lepisosteus_oculatus
ENSACAG00000002674	CASC3	99	66.209	ENSLAFG00000000606	CASC3	91	71.121	Loxodonta_africana
ENSACAG00000002674	CASC3	99	66.896	ENSMFAG00000041496	CASC3	91	72.265	Macaca_fascicularis
ENSACAG00000002674	CASC3	99	66.896	ENSMMUG00000045187	CASC3	91	72.265	Macaca_mulatta
ENSACAG00000002674	CASC3	87	72.713	ENSMLEG00000029049	CASC3	99	72.913	Mandrillus_leucophaeus
ENSACAG00000002674	CASC3	67	56.459	ENSMAMG00000005235	casc3	67	54.148	Mastacembelus_armatus
ENSACAG00000002674	CASC3	84	77.110	ENSMGAG00000013247	CASC3	99	75.362	Meleagris_gallopavo
ENSACAG00000002674	CASC3	69	69.472	ENSMAUG00000006023	Casc3	80	69.396	Mesocricetus_auratus
ENSACAG00000002674	CASC3	99	67.260	ENSMICG00000003321	CASC3	99	67.125	Microcebus_murinus
ENSACAG00000002674	CASC3	99	66.621	ENSMOCG00000013644	Casc3	99	65.427	Microtus_ochrogaster
ENSACAG00000002674	CASC3	86	68.254	ENSMODG00000013044	CASC3	83	70.872	Monodelphis_domestica
ENSACAG00000002674	CASC3	57	77.228	ENSMALG00000019771	casc3	83	45.471	Monopterus_albus
ENSACAG00000002674	CASC3	99	66.805	MGP_CAROLIEiJ_G0017099	Casc3	99	65.975	Mus_caroli
ENSACAG00000002674	CASC3	99	66.113	ENSMUSG00000078676	Casc3	99	65.284	Mus_musculus
ENSACAG00000002674	CASC3	86	71.632	MGP_SPRETEiJ_G0017943	Casc3	91	70.370	Mus_spretus
ENSACAG00000002674	CASC3	99	67.579	ENSMPUG00000014903	CASC3	91	72.504	Mustela_putorius_furo
ENSACAG00000002674	CASC3	99	66.988	ENSMLUG00000010520	CASC3	99	67.675	Myotis_lucifugus
ENSACAG00000002674	CASC3	99	65.616	ENSNGAG00000023121	Casc3	99	65.193	Nannospalax_galili
ENSACAG00000002674	CASC3	99	65.385	ENSNLEG00000001598	CASC3	91	71.032	Nomascus_leucogenys
ENSACAG00000002674	CASC3	60	56.689	ENSMEUG00000015662	CASC3	87	62.069	Notamacropus_eugenii
ENSACAG00000002674	CASC3	72	59.142	ENSOPRG00000007240	-	66	64.488	Ochotona_princeps
ENSACAG00000002674	CASC3	99	65.342	ENSODEG00000017858	CASC3	90	69.846	Octodon_degus
ENSACAG00000002674	CASC3	77	51.295	ENSOANG00000003499	-	96	50.692	Ornithorhynchus_anatinus
ENSACAG00000002674	CASC3	99	66.758	ENSOCUG00000002954	CASC3	91	70.814	Oryctolagus_cuniculus
ENSACAG00000002674	CASC3	98	65.978	ENSOGAG00000034486	CASC3	89	71.032	Otolemur_garnettii
ENSACAG00000002674	CASC3	99	68.313	ENSOARG00000013239	CASC3	91	73.385	Ovis_aries
ENSACAG00000002674	CASC3	99	66.758	ENSPPAG00000035069	CASC3	91	72.111	Pan_paniscus
ENSACAG00000002674	CASC3	99	67.715	ENSPPRG00000023670	CASC3	91	72.657	Panthera_pardus
ENSACAG00000002674	CASC3	86	73.344	ENSPTIG00000010891	CASC3	90	72.981	Panthera_tigris_altaica
ENSACAG00000002674	CASC3	99	67.078	ENSPANG00000021708	CASC3	91	72.419	Papio_anubis
ENSACAG00000002674	CASC3	85	47.479	ENSPKIG00000023186	casc3	91	46.271	Paramormyrops_kingsleyae
ENSACAG00000002674	CASC3	99	65.793	ENSPEMG00000009774	Casc3	99	66.069	Peromyscus_maniculatus_bairdii
ENSACAG00000002674	CASC3	88	71.252	ENSPCIG00000025678	CASC3	91	71.914	Phascolarctos_cinereus
ENSACAG00000002674	CASC3	88	45.524	ENSPFOG00000017632	casc3	93	45.889	Poecilia_formosa
ENSACAG00000002674	CASC3	72	51.440	ENSPLAG00000005268	casc3	94	41.699	Poecilia_latipinna
ENSACAG00000002674	CASC3	60	43.805	ENSPMEG00000010299	casc3	73	45.022	Poecilia_mexicana
ENSACAG00000002674	CASC3	60	69.919	ENSPREG00000011856	casc3	82	47.735	Poecilia_reticulata
ENSACAG00000002674	CASC3	99	66.071	ENSPPYG00000008467	CASC3	91	71.649	Pongo_abelii
ENSACAG00000002674	CASC3	99	67.033	ENSPCOG00000008183	CASC3	99	66.667	Propithecus_coquereli
ENSACAG00000002674	CASC3	86	72.266	ENSPVAG00000008556	CASC3	99	67.125	Pteropus_vampyrus
ENSACAG00000002674	CASC3	99	62.845	ENSRNOG00000009716	Casc3	99	61.878	Rattus_norvegicus
ENSACAG00000002674	CASC3	99	65.797	ENSRBIG00000033289	CASC3	91	70.878	Rhinopithecus_bieti
ENSACAG00000002674	CASC3	99	66.896	ENSRROG00000022337	CASC3	91	72.265	Rhinopithecus_roxellana
ENSACAG00000002674	CASC3	85	72.019	ENSSBOG00000031406	CASC3	97	71.701	Saimiri_boliviensis_boliviensis
ENSACAG00000002674	CASC3	87	72.354	ENSSHAG00000013338	CASC3	99	72.871	Sarcophilus_harrisii
ENSACAG00000002674	CASC3	85	47.257	ENSSFOG00015002645	casc3	92	47.172	Scleropages_formosus
ENSACAG00000002674	CASC3	66	66.429	ENSSMAG00000016096	casc3	63	59.524	Scophthalmus_maximus
ENSACAG00000002674	CASC3	82	62.687	ENSSARG00000010378	CASC3	98	62.729	Sorex_araneus
ENSACAG00000002674	CASC3	87	73.502	ENSSSCG00000017477	CASC3	99	73.469	Sus_scrofa
ENSACAG00000002674	CASC3	73	74.157	ENSTGUG00000002300	CASC3	100	73.783	Taeniopygia_guttata
ENSACAG00000002674	CASC3	87	46.547	ENSTNIG00000003208	casc3	91	46.401	Tetraodon_nigroviridis
ENSACAG00000002674	CASC3	66	82.407	ENSTBEG00000017459	CASC3	57	80.214	Tupaia_belangeri
ENSACAG00000002674	CASC3	84	62.908	ENSTTRG00000016896	CASC3	98	62.687	Tursiops_truncatus
ENSACAG00000002674	CASC3	99	67.077	ENSUAMG00000015116	CASC3	91	71.933	Ursus_americanus
ENSACAG00000002674	CASC3	87	73.312	ENSUMAG00000017697	CASC3	99	72.998	Ursus_maritimus
ENSACAG00000002674	CASC3	59	85.366	ENSVPAG00000000799	CASC3	60	82.927	Vicugna_pacos
ENSACAG00000002674	CASC3	99	67.579	ENSVVUG00000000997	CASC3	91	72.965	Vulpes_vulpes
ENSACAG00000002674	CASC3	86	60.348	ENSXETG00000024395	casc3	90	59.591	Xenopus_tropicalis