EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000002811 (Gene tree)
Gene ID: 100557948
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 14082 bases
Position: chr4:66560017-66574098
Accession: 100557948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000002699	zf-U11-48K	PF05253.12	5.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000002767	SNRNP48-201	1296	XM_003219809	ENSACAP00000002699	317 (aa)	XP_003219857	G1KB63

Gene Model

Click here to download ENSACAG00000002811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000002811's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000002811	SNRNP48	89	64.828	ENSG00000168566	SNRNP48	83	65.068	Homo_sapiens
ENSACAG00000002811	SNRNP48	73	53.165	ENSAPOG00000021430	snrnp48	81	49.829	Acanthochromis_polyacanthus
ENSACAG00000002811	SNRNP48	90	64.384	ENSAMEG00000017349	SNRNP48	84	64.384	Ailuropoda_melanoleuca
ENSACAG00000002811	SNRNP48	80	48.235	ENSACIG00000002032	snrnp48	81	46.875	Amphilophus_citrinellus
ENSACAG00000002811	SNRNP48	73	52.340	ENSAOCG00000010562	snrnp48	81	49.141	Amphiprion_ocellaris
ENSACAG00000002811	SNRNP48	73	51.489	ENSAPEG00000003231	snrnp48	81	48.454	Amphiprion_percula
ENSACAG00000002811	SNRNP48	62	56.219	ENSATEG00000020210	snrnp48	84	49.301	Anabas_testudineus
ENSACAG00000002811	SNRNP48	89	64.483	ENSANAG00000033538	SNRNP48	83	64.726	Aotus_nancymaae
ENSACAG00000002811	SNRNP48	87	48.057	ENSAMXG00000015309	snrnp48	88	47.697	Astyanax_mexicanus
ENSACAG00000002811	SNRNP48	89	63.103	ENSBTAG00000001123	SNRNP48	86	60.855	Bos_taurus
ENSACAG00000002811	SNRNP48	89	65.517	ENSCJAG00000021330	SNRNP48	83	65.411	Callithrix_jacchus
ENSACAG00000002811	SNRNP48	90	64.041	ENSCAFG00000009574	SNRNP48	69	64.041	Canis_familiaris
ENSACAG00000002811	SNRNP48	90	64.041	ENSCAFG00020013203	SNRNP48	83	64.041	Canis_lupus_dingo
ENSACAG00000002811	SNRNP48	89	64.483	ENSCHIG00000015216	SNRNP48	86	61.639	Capra_hircus
ENSACAG00000002811	SNRNP48	90	63.014	ENSTSYG00000000698	SNRNP48	83	63.356	Carlito_syrichta
ENSACAG00000002811	SNRNP48	90	63.699	ENSCAPG00000006768	SNRNP48	92	63.699	Cavia_aperea
ENSACAG00000002811	SNRNP48	89	63.448	ENSCPOG00000007910	SNRNP48	85	62.416	Cavia_porcellus
ENSACAG00000002811	SNRNP48	89	64.828	ENSCCAG00000035652	SNRNP48	83	65.068	Cebus_capucinus
ENSACAG00000002811	SNRNP48	89	63.793	ENSCATG00000033947	SNRNP48	83	64.041	Cercocebus_atys
ENSACAG00000002811	SNRNP48	89	63.448	ENSCLAG00000003765	SNRNP48	85	62.416	Chinchilla_lanigera
ENSACAG00000002811	SNRNP48	90	64.726	ENSCSAG00000007409	SNRNP48	83	65.068	Chlorocebus_sabaeus
ENSACAG00000002811	SNRNP48	94	74.516	ENSCPBG00000019146	SNRNP48	94	74.516	Chrysemys_picta_bellii
ENSACAG00000002811	SNRNP48	89	64.483	ENSCANG00000030017	SNRNP48	83	64.726	Colobus_angolensis_palliatus
ENSACAG00000002811	SNRNP48	89	64.931	ENSCGRG00001001076	-	82	64.931	Cricetulus_griseus_chok1gshd
ENSACAG00000002811	SNRNP48	89	53.846	ENSCGRG00001008805	-	81	53.846	Cricetulus_griseus_chok1gshd
ENSACAG00000002811	SNRNP48	89	64.931	ENSCGRG00000007781	Snrnp48	82	64.931	Cricetulus_griseus_crigri
ENSACAG00000002811	SNRNP48	66	49.065	ENSCSEG00000000722	snrnp48	74	45.588	Cynoglossus_semilaevis
ENSACAG00000002811	SNRNP48	85	50.542	ENSCVAG00000019829	snrnp48	76	48.185	Cyprinodon_variegatus
ENSACAG00000002811	SNRNP48	76	51.852	ENSDARG00000039989	snrnp48	83	49.653	Danio_rerio
ENSACAG00000002811	SNRNP48	90	65.068	ENSDNOG00000014978	SNRNP48	83	65.753	Dasypus_novemcinctus
ENSACAG00000002811	SNRNP48	91	62.752	ENSDORG00000015140	Snrnp48	84	62.752	Dipodomys_ordii
ENSACAG00000002811	SNRNP48	90	63.014	ENSEASG00005012021	SNRNP48	83	63.014	Equus_asinus_asinus
ENSACAG00000002811	SNRNP48	90	63.356	ENSECAG00000026937	SNRNP48	83	63.356	Equus_caballus
ENSACAG00000002811	SNRNP48	90	46.575	ENSEEUG00000015437	SNRNP48	83	46.575	Erinaceus_europaeus
ENSACAG00000002811	SNRNP48	80	49.618	ENSELUG00000009766	snrnp48	85	47.419	Esox_lucius
ENSACAG00000002811	SNRNP48	90	64.726	ENSFCAG00000018853	SNRNP48	83	64.726	Felis_catus
ENSACAG00000002811	SNRNP48	94	67.314	ENSFALG00000007797	SNRNP48	97	68.608	Ficedula_albicollis
ENSACAG00000002811	SNRNP48	91	60.333	ENSFDAG00000009231	SNRNP48	85	61.409	Fukomys_damarensis
ENSACAG00000002811	SNRNP48	62	56.436	ENSFHEG00000014647	snrnp48	96	49.653	Fundulus_heteroclitus
ENSACAG00000002811	SNRNP48	62	56.000	ENSGMOG00000018599	-	87	48.913	Gadus_morhua
ENSACAG00000002811	SNRNP48	88	69.580	ENSGALG00000013005	SNRNP48	95	69.580	Gallus_gallus
ENSACAG00000002811	SNRNP48	71	54.113	ENSGAFG00000021639	snrnp48	81	49.660	Gambusia_affinis
ENSACAG00000002811	SNRNP48	62	52.736	ENSGACG00000017756	-	84	47.458	Gasterosteus_aculeatus
ENSACAG00000002811	SNRNP48	92	74.013	ENSGAGG00000000865	SNRNP48	98	74.013	Gopherus_agassizii
ENSACAG00000002811	SNRNP48	89	64.828	ENSGGOG00000013220	SNRNP48	83	65.068	Gorilla_gorilla
ENSACAG00000002811	SNRNP48	62	53.960	ENSHBUG00000017066	snrnp48	80	48.299	Haplochromis_burtoni
ENSACAG00000002811	SNRNP48	91	62.416	ENSHGLG00000015241	SNRNP48	85	62.416	Heterocephalus_glaber_female
ENSACAG00000002811	SNRNP48	91	62.416	ENSHGLG00100010027	SNRNP48	85	62.416	Heterocephalus_glaber_male
ENSACAG00000002811	SNRNP48	62	52.736	ENSHCOG00000014066	snrnp48	81	46.713	Hippocampus_comes
ENSACAG00000002811	SNRNP48	90	64.384	ENSSTOG00000014635	SNRNP48	83	64.384	Ictidomys_tridecemlineatus
ENSACAG00000002811	SNRNP48	90	62.329	ENSJJAG00000011495	Snrnp48	83	62.329	Jaculus_jaculus
ENSACAG00000002811	SNRNP48	87	47.500	ENSKMAG00000016514	snrnp48	80	48.797	Kryptolebias_marmoratus
ENSACAG00000002811	SNRNP48	67	52.074	ENSLBEG00000026249	snrnp48	81	49.141	Labrus_bergylta
ENSACAG00000002811	SNRNP48	91	57.285	ENSLACG00000003958	SNRNP48	88	57.285	Latimeria_chalumnae
ENSACAG00000002811	SNRNP48	77	58.871	ENSLOCG00000004187	snrnp48	82	56.701	Lepisosteus_oculatus
ENSACAG00000002811	SNRNP48	89	63.103	ENSLAFG00000011152	SNRNP48	83	63.356	Loxodonta_africana
ENSACAG00000002811	SNRNP48	89	64.828	ENSMFAG00000045216	SNRNP48	83	65.068	Macaca_fascicularis
ENSACAG00000002811	SNRNP48	89	64.828	ENSMMUG00000014785	SNRNP48	83	65.068	Macaca_mulatta
ENSACAG00000002811	SNRNP48	89	64.828	ENSMNEG00000042269	SNRNP48	83	65.068	Macaca_nemestrina
ENSACAG00000002811	SNRNP48	89	64.828	ENSMLEG00000034004	SNRNP48	83	65.068	Mandrillus_leucophaeus
ENSACAG00000002811	SNRNP48	65	53.081	ENSMAMG00000018673	snrnp48	71	50.173	Mastacembelus_armatus
ENSACAG00000002811	SNRNP48	89	69.625	ENSMGAG00000006037	SNRNP48	99	69.625	Meleagris_gallopavo
ENSACAG00000002811	SNRNP48	89	65.278	ENSMAUG00000011944	Snrnp48	82	65.278	Mesocricetus_auratus
ENSACAG00000002811	SNRNP48	89	64.828	ENSMICG00000012497	SNRNP48	83	65.068	Microcebus_murinus
ENSACAG00000002811	SNRNP48	89	63.889	ENSMOCG00000015555	Snrnp48	82	63.889	Microtus_ochrogaster
ENSACAG00000002811	SNRNP48	58	54.167	ENSMMOG00000003072	-	60	54.167	Mola_mola
ENSACAG00000002811	SNRNP48	77	73.387	ENSMODG00000009996	SNRNP48	79	71.088	Monodelphis_domestica
ENSACAG00000002811	SNRNP48	64	54.545	ENSMALG00000005725	snrnp48	81	49.141	Monopterus_albus
ENSACAG00000002811	SNRNP48	90	64.828	MGP_CAROLIEiJ_G0018441	Snrnp48	83	64.828	Mus_caroli
ENSACAG00000002811	SNRNP48	89	65.278	ENSMUSG00000021431	Snrnp48	82	65.278	Mus_musculus
ENSACAG00000002811	SNRNP48	89	65.625	MGP_PahariEiJ_G0019509	Snrnp48	82	65.625	Mus_pahari
ENSACAG00000002811	SNRNP48	89	65.278	MGP_SPRETEiJ_G0019321	Snrnp48	82	65.278	Mus_spretus
ENSACAG00000002811	SNRNP48	90	63.699	ENSNGAG00000004849	Snrnp48	83	63.699	Nannospalax_galili
ENSACAG00000002811	SNRNP48	62	53.960	ENSNBRG00000012127	snrnp48	80	48.639	Neolamprologus_brichardi
ENSACAG00000002811	SNRNP48	89	64.828	ENSNLEG00000011667	SNRNP48	83	65.068	Nomascus_leucogenys
ENSACAG00000002811	SNRNP48	85	59.431	ENSOPRG00000015471	SNRNP48	83	59.859	Ochotona_princeps
ENSACAG00000002811	SNRNP48	85	48.540	ENSONIG00000001520	snrnp48	80	48.639	Oreochromis_niloticus
ENSACAG00000002811	SNRNP48	77	66.260	ENSOCUG00000005168	SNRNP48	82	66.667	Oryctolagus_cuniculus
ENSACAG00000002811	SNRNP48	80	50.379	ENSORLG00000015654	snrnp48	81	49.492	Oryzias_latipes
ENSACAG00000002811	SNRNP48	80	50.579	ENSORLG00020015976	snrnp48	66	51.579	Oryzias_latipes_hni
ENSACAG00000002811	SNRNP48	80	51.737	ENSORLG00015022379	snrnp48	69	50.512	Oryzias_latipes_hsok
ENSACAG00000002811	SNRNP48	74	54.772	ENSOMEG00000022007	snrnp48	80	50.515	Oryzias_melastigma
ENSACAG00000002811	SNRNP48	88	63.345	ENSOGAG00000005275	SNRNP48	81	62.718	Otolemur_garnettii
ENSACAG00000002811	SNRNP48	89	64.138	ENSOARG00000017319	SNRNP48	97	64.138	Ovis_aries
ENSACAG00000002811	SNRNP48	89	64.828	ENSPPAG00000032873	SNRNP48	83	65.068	Pan_paniscus
ENSACAG00000002811	SNRNP48	90	64.726	ENSPPRG00000004283	SNRNP48	83	64.726	Panthera_pardus
ENSACAG00000002811	SNRNP48	90	64.726	ENSPTIG00000013502	SNRNP48	98	64.726	Panthera_tigris_altaica
ENSACAG00000002811	SNRNP48	89	64.828	ENSPTRG00000017703	SNRNP48	83	65.068	Pan_troglodytes
ENSACAG00000002811	SNRNP48	89	64.828	ENSPANG00000000771	SNRNP48	83	65.068	Papio_anubis
ENSACAG00000002811	SNRNP48	88	49.650	ENSPKIG00000013703	snrnp48	60	49.477	Paramormyrops_kingsleyae
ENSACAG00000002811	SNRNP48	90	75.168	ENSPSIG00000002213	SNRNP48	94	75.168	Pelodiscus_sinensis
ENSACAG00000002811	SNRNP48	64	53.302	ENSPMGG00000008120	snrnp48	73	53.302	Periophthalmus_magnuspinnatus
ENSACAG00000002811	SNRNP48	89	64.931	ENSPEMG00000008872	Snrnp48	82	64.931	Peromyscus_maniculatus_bairdii
ENSACAG00000002811	SNRNP48	87	45.302	ENSPFOG00000003578	snrnp48	81	49.320	Poecilia_formosa
ENSACAG00000002811	SNRNP48	56	54.891	ENSPLAG00000002290	snrnp48	63	54.891	Poecilia_latipinna
ENSACAG00000002811	SNRNP48	87	45.638	ENSPMEG00000018033	snrnp48	81	49.660	Poecilia_mexicana
ENSACAG00000002811	SNRNP48	62	56.219	ENSPREG00000018541	snrnp48	81	50.345	Poecilia_reticulata
ENSACAG00000002811	SNRNP48	89	63.793	ENSPPYG00000016209	SNRNP48	83	64.041	Pongo_abelii
ENSACAG00000002811	SNRNP48	64	52.381	ENSPCAG00000011991	SNRNP48	78	52.358	Procavia_capensis
ENSACAG00000002811	SNRNP48	89	65.517	ENSPVAG00000002854	SNRNP48	83	65.411	Pteropus_vampyrus
ENSACAG00000002811	SNRNP48	62	53.960	ENSPNYG00000015399	snrnp48	83	49.638	Pundamilia_nyererei
ENSACAG00000002811	SNRNP48	89	64.931	ENSRNOG00000013756	Snrnp48	82	64.931	Rattus_norvegicus
ENSACAG00000002811	SNRNP48	81	67.433	ENSRBIG00000043856	SNRNP48	80	67.300	Rhinopithecus_bieti
ENSACAG00000002811	SNRNP48	89	64.483	ENSRROG00000043229	SNRNP48	83	64.726	Rhinopithecus_roxellana
ENSACAG00000002811	SNRNP48	89	64.828	ENSSBOG00000019486	SNRNP48	83	65.068	Saimiri_boliviensis_boliviensis
ENSACAG00000002811	SNRNP48	77	72.984	ENSSHAG00000014483	SNRNP48	84	71.429	Sarcophilus_harrisii
ENSACAG00000002811	SNRNP48	62	56.931	ENSSFOG00015006610	snrnp48	68	50.853	Scleropages_formosus
ENSACAG00000002811	SNRNP48	80	50.385	ENSSDUG00000014953	snrnp48	81	50.171	Seriola_dumerili
ENSACAG00000002811	SNRNP48	80	50.385	ENSSLDG00000005989	snrnp48	81	50.171	Seriola_lalandi_dorsalis
ENSACAG00000002811	SNRNP48	99	71.131	ENSSPUG00000006257	SNRNP48	97	71.131	Sphenodon_punctatus
ENSACAG00000002811	SNRNP48	73	51.915	ENSSPAG00000006454	snrnp48	81	49.660	Stegastes_partitus
ENSACAG00000002811	SNRNP48	91	67.442	ENSTGUG00000007575	SNRNP48	97	66.774	Taeniopygia_guttata
ENSACAG00000002811	SNRNP48	62	55.721	ENSTRUG00000007031	snrnp48	80	49.485	Takifugu_rubripes
ENSACAG00000002811	SNRNP48	63	49.515	ENSTNIG00000012977	-	77	44.565	Tetraodon_nigroviridis
ENSACAG00000002811	SNRNP48	65	70.335	ENSTBEG00000015620	SNRNP48	62	70.335	Tupaia_belangeri
ENSACAG00000002811	SNRNP48	89	65.517	ENSTTRG00000016715	SNRNP48	82	65.517	Tursiops_truncatus
ENSACAG00000002811	SNRNP48	90	63.699	ENSUAMG00000003690	SNRNP48	83	63.699	Ursus_americanus
ENSACAG00000002811	SNRNP48	90	63.356	ENSVPAG00000003557	SNRNP48	98	63.014	Vicugna_pacos
ENSACAG00000002811	SNRNP48	90	64.726	ENSVVUG00000004996	SNRNP48	83	64.726	Vulpes_vulpes
ENSACAG00000002811	SNRNP48	82	62.264	ENSXETG00000020447	snrnp48	85	60.204	Xenopus_tropicalis
ENSACAG00000002811	SNRNP48	57	55.676	ENSXCOG00000004478	snrnp48	83	43.421	Xiphophorus_couchianus
ENSACAG00000002811	SNRNP48	87	48.239	ENSXMAG00000013595	snrnp48	81	50.000	Xiphophorus_maculatus