EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000002817 (Gene tree)
Gene ID: 100567776
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 73199 bases
Position: chr3:145292596-145365794
Accession: 100567776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000002797	Npa1	PF11707.8	3.4e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000002867	URB1-201	7510	XM_008107604	ENSACAP00000002797	2286 (aa)	XP_008105811	G1KBA1

Gene Model

Click here to download ENSACAG00000002817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000002817's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000002817	URB1	98	53.656	ENSG00000142207	URB1	99	53.704	Homo_sapiens
ENSACAG00000002817	URB1	99	43.918	ENSAPOG00000020308	urb1	99	51.031	Acanthochromis_polyacanthus
ENSACAG00000002817	URB1	99	51.831	ENSAMEG00000011998	URB1	99	51.658	Ailuropoda_melanoleuca
ENSACAG00000002817	URB1	94	44.736	ENSACIG00000003248	urb1	97	44.786	Amphilophus_citrinellus
ENSACAG00000002817	URB1	99	41.482	ENSAOCG00000010364	urb1	99	41.396	Amphiprion_ocellaris
ENSACAG00000002817	URB1	99	42.888	ENSAPEG00000010758	urb1	99	42.845	Amphiprion_percula
ENSACAG00000002817	URB1	99	43.809	ENSATEG00000011790	urb1	97	44.768	Anabas_testudineus
ENSACAG00000002817	URB1	96	64.386	ENSAPLG00000012791	URB1	99	64.386	Anas_platyrhynchos
ENSACAG00000002817	URB1	98	53.589	ENSANAG00000024617	URB1	99	53.642	Aotus_nancymaae
ENSACAG00000002817	URB1	97	45.583	ENSACLG00000024865	urb1	99	45.009	Astatotilapia_calliptera
ENSACAG00000002817	URB1	99	40.416	ENSAMXG00000012306	urb1	99	40.259	Astyanax_mexicanus
ENSACAG00000002817	URB1	99	51.675	ENSBTAG00000012412	URB1	99	51.965	Bos_taurus
ENSACAG00000002817	URB1	98	53.207	ENSCJAG00000009118	URB1	99	53.260	Callithrix_jacchus
ENSACAG00000002817	URB1	99	53.328	ENSCAFG00000008892	URB1	99	53.284	Canis_familiaris
ENSACAG00000002817	URB1	99	53.075	ENSCAFG00020025987	-	99	53.075	Canis_lupus_dingo
ENSACAG00000002817	URB1	99	52.400	ENSCAFG00020025994	-	99	52.312	Canis_lupus_dingo
ENSACAG00000002817	URB1	99	51.876	ENSCHIG00000015645	URB1	99	51.543	Capra_hircus
ENSACAG00000002817	URB1	98	53.751	ENSTSYG00000013286	URB1	98	53.856	Carlito_syrichta
ENSACAG00000002817	URB1	97	51.183	ENSCAPG00000015589	URB1	99	51.272	Cavia_aperea
ENSACAG00000002817	URB1	99	51.850	ENSCPOG00000006748	URB1	99	52.343	Cavia_porcellus
ENSACAG00000002817	URB1	98	53.789	ENSCCAG00000021299	URB1	99	53.843	Cebus_capucinus
ENSACAG00000002817	URB1	98	53.843	ENSCATG00000042630	URB1	99	54.200	Cercocebus_atys
ENSACAG00000002817	URB1	98	52.799	ENSCLAG00000005262	URB1	99	52.850	Chinchilla_lanigera
ENSACAG00000002817	URB1	98	52.537	ENSCSAG00000009584	URB1	98	52.731	Chlorocebus_sabaeus
ENSACAG00000002817	URB1	99	67.393	ENSCPBG00000006454	URB1	99	67.393	Chrysemys_picta_bellii
ENSACAG00000002817	URB1	98	53.630	ENSCANG00000031088	URB1	99	53.958	Colobus_angolensis_palliatus
ENSACAG00000002817	URB1	98	52.467	ENSCGRG00001010616	Urb1	99	52.379	Cricetulus_griseus_chok1gshd
ENSACAG00000002817	URB1	97	52.646	ENSCGRG00000015840	Urb1	99	52.512	Cricetulus_griseus_crigri
ENSACAG00000002817	URB1	99	42.714	ENSCSEG00000012616	urb1	98	43.084	Cynoglossus_semilaevis
ENSACAG00000002817	URB1	92	52.653	ENSCVAG00000009076	urb1	98	52.923	Cyprinodon_variegatus
ENSACAG00000002817	URB1	99	44.133	ENSDARG00000060308	urb1	99	44.401	Danio_rerio
ENSACAG00000002817	URB1	84	57.684	ENSDNOG00000015586	URB1	98	57.821	Dasypus_novemcinctus
ENSACAG00000002817	URB1	98	52.402	ENSDORG00000006735	Urb1	98	52.501	Dipodomys_ordii
ENSACAG00000002817	URB1	90	61.381	ENSETEG00000009080	URB1	89	64.542	Echinops_telfairi
ENSACAG00000002817	URB1	95	60.045	ENSEASG00005007711	URB1	99	52.531	Equus_asinus_asinus
ENSACAG00000002817	URB1	95	63.942	ENSECAG00000013206	URB1	99	63.830	Equus_caballus
ENSACAG00000002817	URB1	53	65.584	ENSEEUG00000003626	-	54	65.560	Erinaceus_europaeus
ENSACAG00000002817	URB1	97	53.646	ENSELUG00000020516	urb1	99	53.646	Esox_lucius
ENSACAG00000002817	URB1	99	52.531	ENSFCAG00000002177	URB1	99	52.423	Felis_catus
ENSACAG00000002817	URB1	97	55.423	ENSFALG00000004636	URB1	99	55.442	Ficedula_albicollis
ENSACAG00000002817	URB1	99	51.805	ENSFDAG00000007288	URB1	95	51.958	Fukomys_damarensis
ENSACAG00000002817	URB1	99	42.034	ENSFHEG00000000202	urb1	99	42.663	Fundulus_heteroclitus
ENSACAG00000002817	URB1	92	45.407	ENSGMOG00000001838	urb1	94	45.439	Gadus_morhua
ENSACAG00000002817	URB1	99	63.359	ENSGALG00000015887	URB1	100	63.359	Gallus_gallus
ENSACAG00000002817	URB1	94	51.095	ENSGAFG00000020694	urb1	98	50.991	Gambusia_affinis
ENSACAG00000002817	URB1	98	45.263	ENSGACG00000011703	urb1	99	45.246	Gasterosteus_aculeatus
ENSACAG00000002817	URB1	99	66.841	ENSGAGG00000022544	URB1	99	66.841	Gopherus_agassizii
ENSACAG00000002817	URB1	98	53.735	ENSGGOG00000000285	URB1	99	53.789	Gorilla_gorilla
ENSACAG00000002817	URB1	97	45.539	ENSHBUG00000001904	urb1	99	44.965	Haplochromis_burtoni
ENSACAG00000002817	URB1	98	51.915	ENSHGLG00000004907	URB1	98	51.965	Heterocephalus_glaber_female
ENSACAG00000002817	URB1	98	52.247	ENSHGLG00100010749	URB1	99	51.895	Heterocephalus_glaber_male
ENSACAG00000002817	URB1	70	52.574	ENSHCOG00000018683	urb1	97	52.574	Hippocampus_comes
ENSACAG00000002817	URB1	98	41.138	ENSIPUG00000014721	urb1	99	41.223	Ictalurus_punctatus
ENSACAG00000002817	URB1	98	53.298	ENSSTOG00000004539	URB1	98	53.257	Ictidomys_tridecemlineatus
ENSACAG00000002817	URB1	97	46.448	ENSKMAG00000006001	urb1	99	47.796	Kryptolebias_marmoratus
ENSACAG00000002817	URB1	97	41.715	ENSLBEG00000027208	urb1	99	41.581	Labrus_bergylta
ENSACAG00000002817	URB1	99	51.418	ENSLACG00000017059	URB1	99	51.096	Latimeria_chalumnae
ENSACAG00000002817	URB1	99	48.658	ENSLOCG00000009190	urb1	99	48.571	Lepisosteus_oculatus
ENSACAG00000002817	URB1	98	54.282	ENSLAFG00000010407	URB1	98	54.481	Loxodonta_africana
ENSACAG00000002817	URB1	99	53.229	ENSMFAG00000034391	URB1	97	53.545	Macaca_fascicularis
ENSACAG00000002817	URB1	98	53.755	ENSMMUG00000010295	URB1	99	54.111	Macaca_mulatta
ENSACAG00000002817	URB1	98	52.824	ENSMNEG00000032981	URB1	98	53.009	Macaca_nemestrina
ENSACAG00000002817	URB1	98	53.711	ENSMLEG00000041435	URB1	99	54.067	Mandrillus_leucophaeus
ENSACAG00000002817	URB1	99	43.583	ENSMAMG00000011238	urb1	99	43.653	Mastacembelus_armatus
ENSACAG00000002817	URB1	95	55.556	ENSMZEG00005011862	urb1	99	52.604	Maylandia_zebra
ENSACAG00000002817	URB1	97	63.782	ENSMGAG00000014512	URB1	99	63.782	Meleagris_gallopavo
ENSACAG00000002817	URB1	91	59.165	ENSMAUG00000010516	Urb1	99	57.349	Mesocricetus_auratus
ENSACAG00000002817	URB1	99	52.774	ENSMICG00000016424	URB1	99	53.089	Microcebus_murinus
ENSACAG00000002817	URB1	99	50.830	ENSMOCG00000012613	Urb1	98	51.145	Microtus_ochrogaster
ENSACAG00000002817	URB1	99	55.332	ENSMODG00000021076	URB1	99	55.070	Monodelphis_domestica
ENSACAG00000002817	URB1	99	42.606	ENSMALG00000017411	urb1	99	42.629	Monopterus_albus
ENSACAG00000002817	URB1	99	51.890	MGP_CAROLIEiJ_G0020948	Urb1	99	51.890	Mus_caroli
ENSACAG00000002817	URB1	99	51.715	ENSMUSG00000039929	Urb1	99	51.715	Mus_musculus
ENSACAG00000002817	URB1	99	51.630	MGP_PahariEiJ_G0016653	Urb1	99	51.499	Mus_pahari
ENSACAG00000002817	URB1	99	51.696	MGP_SPRETEiJ_G0021854	Urb1	98	52.164	Mus_spretus
ENSACAG00000002817	URB1	99	52.470	ENSMPUG00000001123	URB1	99	52.362	Mustela_putorius_furo
ENSACAG00000002817	URB1	99	51.396	ENSNGAG00000001905	Urb1	99	51.309	Nannospalax_galili
ENSACAG00000002817	URB1	81	45.905	ENSNBRG00000001049	urb1	99	45.529	Neolamprologus_brichardi
ENSACAG00000002817	URB1	98	52.685	ENSNLEG00000026872	URB1	99	52.731	Nomascus_leucogenys
ENSACAG00000002817	URB1	92	57.925	ENSMEUG00000010828	URB1	93	57.678	Notamacropus_eugenii
ENSACAG00000002817	URB1	99	50.022	ENSOPRG00000013482	URB1	99	50.221	Ochotona_princeps
ENSACAG00000002817	URB1	99	52.233	ENSODEG00000002587	URB1	98	52.476	Octodon_degus
ENSACAG00000002817	URB1	99	45.788	ENSONIG00000005599	urb1	99	45.593	Oreochromis_niloticus
ENSACAG00000002817	URB1	99	52.487	ENSOCUG00000009381	URB1	98	52.967	Oryctolagus_cuniculus
ENSACAG00000002817	URB1	99	43.641	ENSORLG00000003429	urb1	100	43.554	Oryzias_latipes
ENSACAG00000002817	URB1	99	43.696	ENSORLG00020013785	urb1	100	43.609	Oryzias_latipes_hni
ENSACAG00000002817	URB1	92	53.501	ENSORLG00015019421	urb1	99	52.941	Oryzias_latipes_hsok
ENSACAG00000002817	URB1	75	55.000	ENSOMEG00000002094	urb1	97	54.326	Oryzias_melastigma
ENSACAG00000002817	URB1	98	53.758	ENSOGAG00000017140	URB1	99	54.003	Otolemur_garnettii
ENSACAG00000002817	URB1	95	55.804	ENSOARG00000013679	URB1	99	54.264	Ovis_aries
ENSACAG00000002817	URB1	98	53.826	ENSPPAG00000003423	URB1	99	53.880	Pan_paniscus
ENSACAG00000002817	URB1	99	52.443	ENSPPRG00000023131	URB1	99	52.379	Panthera_pardus
ENSACAG00000002817	URB1	91	54.128	ENSPTIG00000016125	URB1	96	54.129	Panthera_tigris_altaica
ENSACAG00000002817	URB1	98	53.738	ENSPTRG00000013852	URB1	99	53.792	Pan_troglodytes
ENSACAG00000002817	URB1	98	53.782	ENSPANG00000021964	URB1	98	54.091	Papio_anubis
ENSACAG00000002817	URB1	98	45.990	ENSPKIG00000003683	urb1	97	45.915	Paramormyrops_kingsleyae
ENSACAG00000002817	URB1	99	52.193	ENSPEMG00000021205	Urb1	99	51.889	Peromyscus_maniculatus_bairdii
ENSACAG00000002817	URB1	79	33.108	ENSPMAG00000009733	URB1	99	33.437	Petromyzon_marinus
ENSACAG00000002817	URB1	99	55.318	ENSPCIG00000016350	URB1	99	55.610	Phascolarctos_cinereus
ENSACAG00000002817	URB1	96	44.119	ENSPLAG00000004371	urb1	99	44.119	Poecilia_latipinna
ENSACAG00000002817	URB1	99	44.581	ENSPMEG00000006634	urb1	99	44.493	Poecilia_mexicana
ENSACAG00000002817	URB1	99	44.155	ENSPREG00000013453	urb1	99	44.068	Poecilia_reticulata
ENSACAG00000002817	URB1	99	52.936	ENSPPYG00000011359	URB1	99	53.460	Pongo_abelii
ENSACAG00000002817	URB1	99	46.248	ENSPCAG00000007430	URB1	99	46.204	Procavia_capensis
ENSACAG00000002817	URB1	99	53.261	ENSPCOG00000022695	URB1	99	53.261	Propithecus_coquereli
ENSACAG00000002817	URB1	99	52.009	ENSPVAG00000000889	URB1	99	52.033	Pteropus_vampyrus
ENSACAG00000002817	URB1	97	44.518	ENSPNYG00000010589	urb1	99	43.962	Pundamilia_nyererei
ENSACAG00000002817	URB1	99	41.714	ENSPNAG00000019324	urb1	98	42.038	Pygocentrus_nattereri
ENSACAG00000002817	URB1	99	51.804	ENSRNOG00000002080	Urb1	99	51.607	Rattus_norvegicus
ENSACAG00000002817	URB1	98	53.339	ENSRBIG00000033122	URB1	99	53.595	Rhinopithecus_bieti
ENSACAG00000002817	URB1	98	53.427	ENSRROG00000040237	URB1	99	53.683	Rhinopithecus_roxellana
ENSACAG00000002817	URB1	98	53.792	ENSSBOG00000027672	URB1	99	53.846	Saimiri_boliviensis_boliviensis
ENSACAG00000002817	URB1	99	55.062	ENSSHAG00000005140	URB1	99	54.625	Sarcophilus_harrisii
ENSACAG00000002817	URB1	91	47.092	ENSSFOG00015000339	urb1	98	47.366	Scleropages_formosus
ENSACAG00000002817	URB1	98	45.120	ENSSMAG00000003782	urb1	99	44.983	Scophthalmus_maximus
ENSACAG00000002817	URB1	99	45.581	ENSSDUG00000012313	urb1	99	45.407	Seriola_dumerili
ENSACAG00000002817	URB1	99	45.581	ENSSLDG00000023179	urb1	99	45.368	Seriola_lalandi_dorsalis
ENSACAG00000002817	URB1	99	66.055	ENSSPUG00000012447	URB1	99	66.026	Sphenodon_punctatus
ENSACAG00000002817	URB1	99	44.723	ENSSPAG00000006325	urb1	100	50.000	Stegastes_partitus
ENSACAG00000002817	URB1	99	51.858	ENSSSCG00000032024	URB1	99	51.661	Sus_scrofa
ENSACAG00000002817	URB1	73	63.152	ENSTGUG00000013442	URB1	100	63.152	Taeniopygia_guttata
ENSACAG00000002817	URB1	98	44.012	ENSTRUG00000009372	urb1	99	44.012	Takifugu_rubripes
ENSACAG00000002817	URB1	97	43.453	ENSTNIG00000016277	urb1	99	43.428	Tetraodon_nigroviridis
ENSACAG00000002817	URB1	79	59.593	ENSTBEG00000010044	URB1	80	59.593	Tupaia_belangeri
ENSACAG00000002817	URB1	89	58.031	ENSTTRG00000007712	URB1	92	58.135	Tursiops_truncatus
ENSACAG00000002817	URB1	99	52.028	ENSUAMG00000012231	URB1	99	51.963	Ursus_americanus
ENSACAG00000002817	URB1	88	54.197	ENSUMAG00000017419	URB1	94	54.654	Ursus_maritimus
ENSACAG00000002817	URB1	71	71.233	ENSVPAG00000001164	URB1	68	71.233	Vicugna_pacos
ENSACAG00000002817	URB1	99	53.188	ENSVVUG00000000551	URB1	99	53.188	Vulpes_vulpes
ENSACAG00000002817	URB1	99	53.497	ENSXETG00000009895	urb1	99	53.497	Xenopus_tropicalis
ENSACAG00000002817	URB1	97	49.485	ENSXCOG00000005500	urb1	99	48.454	Xiphophorus_couchianus
ENSACAG00000002817	URB1	97	49.485	ENSXMAG00000007253	urb1	99	48.454	Xiphophorus_maculatus