EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000002823 (Gene tree)
Gene ID: 100554467
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 62196 bases
Position: chr1:61511002-61573197
Accession: 100554467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000002921	Suf	PF05843.14	1.6e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000002995	CSTF3-201	3829	XM_003214701	ENSACAP00000002921	718 (aa)	XP_003214749	G1KBE9

Gene Model

Click here to download ENSACAG00000002823's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000002823's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000002823	CSTF3	100	95.682	ENSG00000176102	CSTF3	100	95.682	Homo_sapiens
ENSACAG00000002823	CSTF3	100	91.783	ENSAPOG00000014054	cstf3	100	91.783	Acanthochromis_polyacanthus
ENSACAG00000002823	CSTF3	99	96.192	ENSAMEG00000007187	CSTF3	98	96.192	Ailuropoda_melanoleuca
ENSACAG00000002823	CSTF3	87	86.400	ENSACIG00000005539	cstf3	100	86.400	Amphilophus_citrinellus
ENSACAG00000002823	CSTF3	100	91.643	ENSAOCG00000010930	cstf3	100	91.643	Amphiprion_ocellaris
ENSACAG00000002823	CSTF3	100	91.643	ENSAPEG00000007903	cstf3	100	91.643	Amphiprion_percula
ENSACAG00000002823	CSTF3	100	91.643	ENSATEG00000000190	cstf3	100	91.643	Anabas_testudineus
ENSACAG00000002823	CSTF3	99	97.316	ENSAPLG00000007217	CSTF3	100	97.316	Anas_platyrhynchos
ENSACAG00000002823	CSTF3	100	95.682	ENSANAG00000020699	CSTF3	100	95.840	Aotus_nancymaae
ENSACAG00000002823	CSTF3	98	92.057	ENSACLG00000007820	cstf3	100	91.365	Astatotilapia_calliptera
ENSACAG00000002823	CSTF3	100	90.264	ENSAMXG00000014198	cstf3	100	90.542	Astyanax_mexicanus
ENSACAG00000002823	CSTF3	100	95.682	ENSBTAG00000008617	CSTF3	100	96.142	Bos_taurus
ENSACAG00000002823	CSTF3	97	49.178	WBGene00006307	suf-1	99	49.178	Caenorhabditis_elegans
ENSACAG00000002823	CSTF3	100	95.682	ENSCJAG00000005533	CSTF3	100	95.840	Callithrix_jacchus
ENSACAG00000002823	CSTF3	100	95.682	ENSCAFG00000007264	CSTF3	100	95.682	Canis_familiaris
ENSACAG00000002823	CSTF3	99	96.333	ENSCAFG00020002715	CSTF3	99	96.333	Canis_lupus_dingo
ENSACAG00000002823	CSTF3	98	94.737	ENSCHIG00000016418	CSTF3	100	95.840	Capra_hircus
ENSACAG00000002823	CSTF3	99	96.192	ENSTSYG00000000451	CSTF3	99	99.111	Carlito_syrichta
ENSACAG00000002823	CSTF3	83	90.995	ENSCAPG00000010958	CSTF3	98	90.995	Cavia_aperea
ENSACAG00000002823	CSTF3	100	95.543	ENSCPOG00000005545	CSTF3	100	95.543	Cavia_porcellus
ENSACAG00000002823	CSTF3	100	95.682	ENSCCAG00000024790	CSTF3	100	95.840	Cebus_capucinus
ENSACAG00000002823	CSTF3	100	95.682	ENSCATG00000007080	CSTF3	100	95.840	Cercocebus_atys
ENSACAG00000002823	CSTF3	100	95.682	ENSCLAG00000016179	CSTF3	100	95.682	Chinchilla_lanigera
ENSACAG00000002823	CSTF3	78	99.248	ENSCHOG00000002497	CSTF3	79	99.248	Choloepus_hoffmanni
ENSACAG00000002823	CSTF3	100	96.797	ENSCPBG00000006753	CSTF3	100	96.797	Chrysemys_picta_bellii
ENSACAG00000002823	CSTF3	99	61.911	ENSCING00000006401	-	99	61.773	Ciona_intestinalis
ENSACAG00000002823	CSTF3	98	61.711	ENSCSAVG00000004851	-	100	61.711	Ciona_savignyi
ENSACAG00000002823	CSTF3	100	95.682	ENSCANG00000035468	CSTF3	100	95.840	Colobus_angolensis_palliatus
ENSACAG00000002823	CSTF3	100	95.543	ENSCGRG00001014773	Cstf3	100	95.543	Cricetulus_griseus_chok1gshd
ENSACAG00000002823	CSTF3	100	95.543	ENSCGRG00000004142	Cstf3	100	95.543	Cricetulus_griseus_crigri
ENSACAG00000002823	CSTF3	100	91.504	ENSCSEG00000014283	cstf3	100	91.504	Cynoglossus_semilaevis
ENSACAG00000002823	CSTF3	100	90.947	ENSCVAG00000019739	cstf3	100	90.947	Cyprinodon_variegatus
ENSACAG00000002823	CSTF3	100	92.618	ENSDARG00000018904	cstf3	100	92.618	Danio_rerio
ENSACAG00000002823	CSTF3	99	96.051	ENSDNOG00000007366	CSTF3	99	96.051	Dasypus_novemcinctus
ENSACAG00000002823	CSTF3	99	88.575	ENSDORG00000005898	Cstf3	99	88.575	Dipodomys_ordii
ENSACAG00000002823	CSTF3	98	57.123	FBgn0003559	su(f)	98	57.123	Drosophila_melanogaster
ENSACAG00000002823	CSTF3	89	90.654	ENSETEG00000017097	CSTF3	90	90.654	Echinops_telfairi
ENSACAG00000002823	CSTF3	84	74.050	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSACAG00000002823	CSTF3	99	95.063	ENSEASG00005019884	CSTF3	100	96.429	Equus_asinus_asinus
ENSACAG00000002823	CSTF3	99	95.063	ENSECAG00000023338	CSTF3	100	96.429	Equus_caballus
ENSACAG00000002823	CSTF3	100	90.251	ENSEEUG00000015167	CSTF3	100	90.251	Erinaceus_europaeus
ENSACAG00000002823	CSTF3	100	90.390	ENSELUG00000023393	cstf3	100	90.390	Esox_lucius
ENSACAG00000002823	CSTF3	100	95.682	ENSFCAG00000030711	CSTF3	100	95.682	Felis_catus
ENSACAG00000002823	CSTF3	93	97.744	ENSFALG00000010764	CSTF3	100	95.545	Ficedula_albicollis
ENSACAG00000002823	CSTF3	100	95.682	ENSFDAG00000012082	CSTF3	100	95.682	Fukomys_damarensis
ENSACAG00000002823	CSTF3	100	90.808	ENSFHEG00000020623	cstf3	100	90.808	Fundulus_heteroclitus
ENSACAG00000002823	CSTF3	100	89.708	ENSGMOG00000012275	cstf3	100	89.708	Gadus_morhua
ENSACAG00000002823	CSTF3	100	96.379	ENSGALG00000011685	CSTF3	100	96.379	Gallus_gallus
ENSACAG00000002823	CSTF3	100	90.947	ENSGAFG00000002181	cstf3	100	90.947	Gambusia_affinis
ENSACAG00000002823	CSTF3	100	90.947	ENSGACG00000015997	cstf3	100	90.947	Gasterosteus_aculeatus
ENSACAG00000002823	CSTF3	100	96.797	ENSGAGG00000006200	CSTF3	100	96.797	Gopherus_agassizii
ENSACAG00000002823	CSTF3	99	90.409	ENSGGOG00000026591	CSTF3	96	94.222	Gorilla_gorilla
ENSACAG00000002823	CSTF3	98	92.057	ENSHBUG00000016656	cstf3	100	91.365	Haplochromis_burtoni
ENSACAG00000002823	CSTF3	100	95.543	ENSHGLG00000017834	CSTF3	100	95.543	Heterocephalus_glaber_female
ENSACAG00000002823	CSTF3	100	95.543	ENSHGLG00100018042	CSTF3	100	95.543	Heterocephalus_glaber_male
ENSACAG00000002823	CSTF3	100	88.440	ENSHCOG00000015218	cstf3	100	88.440	Hippocampus_comes
ENSACAG00000002823	CSTF3	100	90.808	ENSIPUG00000013170	CSTF3	100	90.808	Ictalurus_punctatus
ENSACAG00000002823	CSTF3	100	95.682	ENSSTOG00000013306	CSTF3	100	95.682	Ictidomys_tridecemlineatus
ENSACAG00000002823	CSTF3	99	84.240	ENSJJAG00000018430	Cstf3	99	84.240	Jaculus_jaculus
ENSACAG00000002823	CSTF3	100	90.390	ENSKMAG00000010916	cstf3	100	90.390	Kryptolebias_marmoratus
ENSACAG00000002823	CSTF3	100	90.947	ENSLBEG00000002306	cstf3	100	90.947	Labrus_bergylta
ENSACAG00000002823	CSTF3	100	92.618	ENSLACG00000017296	CSTF3	100	92.618	Latimeria_chalumnae
ENSACAG00000002823	CSTF3	100	92.340	ENSLOCG00000004415	cstf3	100	92.340	Lepisosteus_oculatus
ENSACAG00000002823	CSTF3	100	95.822	ENSLAFG00000008712	CSTF3	100	95.822	Loxodonta_africana
ENSACAG00000002823	CSTF3	100	95.682	ENSMFAG00000029516	CSTF3	100	95.840	Macaca_fascicularis
ENSACAG00000002823	CSTF3	100	95.682	ENSMMUG00000002542	CSTF3	100	95.682	Macaca_mulatta
ENSACAG00000002823	CSTF3	100	95.682	ENSMNEG00000021807	CSTF3	100	95.840	Macaca_nemestrina
ENSACAG00000002823	CSTF3	100	95.682	ENSMLEG00000039594	CSTF3	100	95.840	Mandrillus_leucophaeus
ENSACAG00000002823	CSTF3	100	91.365	ENSMAMG00000020423	cstf3	100	91.365	Mastacembelus_armatus
ENSACAG00000002823	CSTF3	98	92.057	ENSMZEG00005012082	cstf3	100	91.365	Maylandia_zebra
ENSACAG00000002823	CSTF3	100	96.240	ENSMGAG00000001383	CSTF3	100	96.240	Meleagris_gallopavo
ENSACAG00000002823	CSTF3	100	95.404	ENSMAUG00000002487	Cstf3	100	95.404	Mesocricetus_auratus
ENSACAG00000002823	CSTF3	100	95.404	ENSMICG00000004784	CSTF3	100	95.520	Microcebus_murinus
ENSACAG00000002823	CSTF3	100	95.543	ENSMOCG00000017583	Cstf3	100	95.543	Microtus_ochrogaster
ENSACAG00000002823	CSTF3	99	91.949	ENSMMOG00000016026	cstf3	94	91.949	Mola_mola
ENSACAG00000002823	CSTF3	99	83.287	ENSMODG00000025205	-	99	83.287	Monodelphis_domestica
ENSACAG00000002823	CSTF3	100	96.240	ENSMODG00000009745	-	100	96.240	Monodelphis_domestica
ENSACAG00000002823	CSTF3	100	91.643	ENSMALG00000012050	cstf3	100	91.643	Monopterus_albus
ENSACAG00000002823	CSTF3	100	95.543	MGP_CAROLIEiJ_G0024026	Cstf3	100	95.543	Mus_caroli
ENSACAG00000002823	CSTF3	100	95.543	ENSMUSG00000027176	Cstf3	100	95.543	Mus_musculus
ENSACAG00000002823	CSTF3	100	95.543	MGP_PahariEiJ_G0025464	Cstf3	100	95.543	Mus_pahari
ENSACAG00000002823	CSTF3	100	95.543	MGP_SPRETEiJ_G0024939	Cstf3	100	95.543	Mus_spretus
ENSACAG00000002823	CSTF3	100	95.543	ENSMPUG00000011457	CSTF3	100	95.543	Mustela_putorius_furo
ENSACAG00000002823	CSTF3	99	95.781	ENSMLUG00000003073	-	99	95.781	Myotis_lucifugus
ENSACAG00000002823	CSTF3	100	92.897	ENSMLUG00000026022	-	100	92.897	Myotis_lucifugus
ENSACAG00000002823	CSTF3	100	95.543	ENSNGAG00000010677	Cstf3	100	95.543	Nannospalax_galili
ENSACAG00000002823	CSTF3	87	91.360	ENSNBRG00000007345	cstf3	100	91.360	Neolamprologus_brichardi
ENSACAG00000002823	CSTF3	100	95.682	ENSNLEG00000017901	CSTF3	100	95.840	Nomascus_leucogenys
ENSACAG00000002823	CSTF3	73	93.881	ENSMEUG00000005640	-	100	93.881	Notamacropus_eugenii
ENSACAG00000002823	CSTF3	67	93.421	ENSOPRG00000000199	-	67	93.421	Ochotona_princeps
ENSACAG00000002823	CSTF3	89	83.648	ENSODEG00000006311	-	97	83.648	Octodon_degus
ENSACAG00000002823	CSTF3	100	95.682	ENSODEG00000016737	-	100	95.682	Octodon_degus
ENSACAG00000002823	CSTF3	98	92.057	ENSONIG00000005563	cstf3	100	91.365	Oreochromis_niloticus
ENSACAG00000002823	CSTF3	90	95.846	ENSOANG00000015140	CSTF3	100	95.846	Ornithorhynchus_anatinus
ENSACAG00000002823	CSTF3	100	95.404	ENSOCUG00000015417	CSTF3	100	95.404	Oryctolagus_cuniculus
ENSACAG00000002823	CSTF3	99	90.756	ENSORLG00000009762	cstf3	99	90.756	Oryzias_latipes
ENSACAG00000002823	CSTF3	99	90.756	ENSORLG00020005540	cstf3	99	90.756	Oryzias_latipes_hni
ENSACAG00000002823	CSTF3	99	90.616	ENSORLG00015003551	cstf3	99	90.616	Oryzias_latipes_hsok
ENSACAG00000002823	CSTF3	99	91.152	ENSOMEG00000003848	cstf3	99	91.152	Oryzias_melastigma
ENSACAG00000002823	CSTF3	100	95.146	ENSOGAG00000010229	CSTF3	100	95.146	Otolemur_garnettii
ENSACAG00000002823	CSTF3	90	95.801	ENSOARG00000017271	CSTF3	99	95.801	Ovis_aries
ENSACAG00000002823	CSTF3	99	92.807	ENSPPAG00000027358	CSTF3	99	92.807	Pan_paniscus
ENSACAG00000002823	CSTF3	100	95.682	ENSPPRG00000016852	CSTF3	100	95.682	Panthera_pardus
ENSACAG00000002823	CSTF3	100	95.682	ENSPTIG00000008716	CSTF3	100	95.682	Panthera_tigris_altaica
ENSACAG00000002823	CSTF3	100	95.682	ENSPTRG00000003485	CSTF3	100	95.682	Pan_troglodytes
ENSACAG00000002823	CSTF3	100	95.682	ENSPANG00000013722	CSTF3	100	95.682	Papio_anubis
ENSACAG00000002823	CSTF3	100	91.643	ENSPKIG00000023648	cstf3	100	91.643	Paramormyrops_kingsleyae
ENSACAG00000002823	CSTF3	100	96.936	ENSPSIG00000009173	CSTF3	100	96.936	Pelodiscus_sinensis
ENSACAG00000002823	CSTF3	76	94.708	ENSPMGG00000000164	cstf3	99	94.708	Periophthalmus_magnuspinnatus
ENSACAG00000002823	CSTF3	100	95.543	ENSPEMG00000011481	Cstf3	100	95.543	Peromyscus_maniculatus_bairdii
ENSACAG00000002823	CSTF3	99	80.028	ENSPMAG00000007282	cstf3	100	79.444	Petromyzon_marinus
ENSACAG00000002823	CSTF3	99	80.224	ENSPCIG00000030419	-	89	80.645	Phascolarctos_cinereus
ENSACAG00000002823	CSTF3	99	94.366	ENSPCIG00000026406	-	100	96.320	Phascolarctos_cinereus
ENSACAG00000002823	CSTF3	100	91.226	ENSPFOG00000017239	cstf3	100	91.226	Poecilia_formosa
ENSACAG00000002823	CSTF3	100	91.226	ENSPLAG00000009456	cstf3	100	91.226	Poecilia_latipinna
ENSACAG00000002823	CSTF3	100	91.226	ENSPMEG00000010320	cstf3	100	91.226	Poecilia_mexicana
ENSACAG00000002823	CSTF3	100	91.226	ENSPREG00000013549	cstf3	100	91.226	Poecilia_reticulata
ENSACAG00000002823	CSTF3	100	95.682	ENSPPYG00000003375	CSTF3	100	95.682	Pongo_abelii
ENSACAG00000002823	CSTF3	71	98.955	ENSPCAG00000008025	-	71	98.955	Procavia_capensis
ENSACAG00000002823	CSTF3	100	90.390	ENSPCOG00000014417	CSTF3	100	90.390	Propithecus_coquereli
ENSACAG00000002823	CSTF3	100	90.251	ENSPVAG00000002350	CSTF3	100	90.251	Pteropus_vampyrus
ENSACAG00000002823	CSTF3	98	92.057	ENSPNYG00000018259	cstf3	100	91.365	Pundamilia_nyererei
ENSACAG00000002823	CSTF3	100	91.922	ENSPNAG00000020182	cstf3	100	91.922	Pygocentrus_nattereri
ENSACAG00000002823	CSTF3	87	95.360	ENSRNOG00000012089	Cstf3	100	95.360	Rattus_norvegicus
ENSACAG00000002823	CSTF3	99	94.922	ENSRBIG00000044258	CSTF3	100	95.840	Rhinopithecus_bieti
ENSACAG00000002823	CSTF3	100	95.682	ENSRROG00000043450	CSTF3	100	95.840	Rhinopithecus_roxellana
ENSACAG00000002823	CSTF3	100	95.682	ENSSBOG00000024764	CSTF3	98	99.111	Saimiri_boliviensis_boliviensis
ENSACAG00000002823	CSTF3	99	95.810	ENSSHAG00000018128	-	99	95.810	Sarcophilus_harrisii
ENSACAG00000002823	CSTF3	99	85.493	ENSSHAG00000003135	-	98	85.493	Sarcophilus_harrisii
ENSACAG00000002823	CSTF3	100	92.479	ENSSFOG00015022133	cstf3	100	92.479	Scleropages_formosus
ENSACAG00000002823	CSTF3	100	90.947	ENSSMAG00000002197	cstf3	100	90.947	Scophthalmus_maximus
ENSACAG00000002823	CSTF3	100	91.783	ENSSDUG00000020426	cstf3	100	91.783	Seriola_dumerili
ENSACAG00000002823	CSTF3	100	91.783	ENSSLDG00000025649	cstf3	100	91.783	Seriola_lalandi_dorsalis
ENSACAG00000002823	CSTF3	100	95.265	ENSSARG00000000391	CSTF3	100	95.265	Sorex_araneus
ENSACAG00000002823	CSTF3	96	96.961	ENSSPUG00000010546	CSTF3	100	96.961	Sphenodon_punctatus
ENSACAG00000002823	CSTF3	100	91.643	ENSSPAG00000004958	cstf3	100	91.643	Stegastes_partitus
ENSACAG00000002823	CSTF3	99	95.787	ENSSSCG00000040954	CSTF3	99	95.787	Sus_scrofa
ENSACAG00000002823	CSTF3	99	96.469	ENSTGUG00000005010	CSTF3	100	96.469	Taeniopygia_guttata
ENSACAG00000002823	CSTF3	100	89.833	ENSTRUG00000004959	cstf3	100	89.833	Takifugu_rubripes
ENSACAG00000002823	CSTF3	99	91.102	ENSTNIG00000013811	cstf3	98	91.102	Tetraodon_nigroviridis
ENSACAG00000002823	CSTF3	89	92.835	ENSTBEG00000001544	CSTF3	90	92.835	Tupaia_belangeri
ENSACAG00000002823	CSTF3	100	92.758	ENSTTRG00000016366	CSTF3	100	92.758	Tursiops_truncatus
ENSACAG00000002823	CSTF3	99	96.051	ENSUMAG00000018971	CSTF3	100	95.520	Ursus_maritimus
ENSACAG00000002823	CSTF3	100	95.543	ENSVPAG00000007800	CSTF3	100	95.543	Vicugna_pacos
ENSACAG00000002823	CSTF3	99	96.333	ENSVVUG00000014938	CSTF3	100	95.840	Vulpes_vulpes
ENSACAG00000002823	CSTF3	88	79.688	ENSXETG00000021399	cstf3	100	80.744	Xenopus_tropicalis
ENSACAG00000002823	CSTF3	66	43.892	ENSXETG00000017946	-	99	43.892	Xenopus_tropicalis
ENSACAG00000002823	CSTF3	87	90.720	ENSXCOG00000011741	cstf3	100	90.720	Xiphophorus_couchianus
ENSACAG00000002823	CSTF3	100	90.947	ENSXMAG00000009545	cstf3	100	90.947	Xiphophorus_maculatus