EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSACAG00000003120 (Gene tree)
Gene ID
100565966
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Anolis_carolinensis
Status
putative
Strand
Minus strand
Length
26653 bases
Position
chr4:130396386-130423038
Accession
100565966
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACAP00000003175CSDPF00313.221.4e-8515
ENSACAP00000003175CSDPF00313.221.4e-8525
ENSACAP00000003175CSDPF00313.221.4e-8535
ENSACAP00000003175CSDPF00313.221.4e-8545
ENSACAP00000003175CSDPF00313.221.4e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACAT00000003256CSDE1-2012510XM_008109862ENSACAP00000003175796 (aa)XP_008108069G1KBQ5
Gene Model
Click here to download ENSACAG00000003120's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000003120's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACAG00000003120CSDE110092.231ENSG00000009307CSDE110097.826Homo_sapiens
ENSACAG00000003120CSDE110077.534ENSAPOG00000015538csde110077.157Acanthochromis_polyacanthus
ENSACAG00000003120CSDE110087.343ENSAMEG00000017129CSDE19487.343Ailuropoda_melanoleuca
ENSACAG00000003120CSDE18780.541ENSACIG00000015175csde110080.541Amphilophus_citrinellus
ENSACAG00000003120CSDE110077.656ENSAOCG00000011510csde110076.875Amphiprion_ocellaris
ENSACAG00000003120CSDE110079.500ENSAPEG00000007194csde110077.656Amphiprion_percula
ENSACAG00000003120CSDE110076.404ENSATEG00000003864csde110076.404Anabas_testudineus
ENSACAG00000003120CSDE110091.709ENSAPLG00000008797CSDE110091.709Anas_platyrhynchos
ENSACAG00000003120CSDE110092.231ENSANAG00000024665CSDE19592.231Aotus_nancymaae
ENSACAG00000003120CSDE17872.109ENSANAG00000028396-9172.109Aotus_nancymaae
ENSACAG00000003120CSDE110079.125ENSACLG00000013296csde110079.125Astatotilapia_calliptera
ENSACAG00000003120CSDE110075.810ENSAMXG00000007436csde110075.810Astyanax_mexicanus
ENSACAG00000003120CSDE110091.855ENSBTAG00000000678CSDE110087.970Bos_taurus
ENSACAG00000003120CSDE110092.356ENSCJAG00000012565CSDE19592.356Callithrix_jacchus
ENSACAG00000003120CSDE19887.980ENSCAFG00000009618CSDE19487.980Canis_familiaris
ENSACAG00000003120CSDE110088.095ENSCAFG00020000481CSDE110088.095Canis_lupus_dingo
ENSACAG00000003120CSDE110091.980ENSCHIG00000017250CSDE110088.095Capra_hircus
ENSACAG00000003120CSDE110092.607ENSTSYG00000003747CSDE110092.607Carlito_syrichta
ENSACAG00000003120CSDE110093.865ENSCAPG00000015128CSDE110093.865Cavia_aperea
ENSACAG00000003120CSDE110086.842ENSCPOG00000040388CSDE110086.842Cavia_porcellus
ENSACAG00000003120CSDE110092.356ENSCCAG00000036794CSDE110092.356Cebus_capucinus
ENSACAG00000003120CSDE19865.772ENSCCAG00000030878-9165.772Cebus_capucinus
ENSACAG00000003120CSDE19567.574ENSCCAG00000033677-9967.458Cebus_capucinus
ENSACAG00000003120CSDE110092.231ENSCATG00000036962CSDE19592.231Cercocebus_atys
ENSACAG00000003120CSDE110091.980ENSCLAG00000006618CSDE110091.980Chinchilla_lanigera
ENSACAG00000003120CSDE110092.231ENSCSAG00000001658CSDE19592.231Chlorocebus_sabaeus
ENSACAG00000003120CSDE110093.252ENSCHOG00000000918CSDE18593.252Choloepus_hoffmanni
ENSACAG00000003120CSDE110096.231ENSCPBG00000016547CSDE110096.231Chrysemys_picta_bellii
ENSACAG00000003120CSDE19743.505ENSCING00000014465-9843.505Ciona_intestinalis
ENSACAG00000003120CSDE19643.159ENSCSAVG00000008100-9843.159Ciona_savignyi
ENSACAG00000003120CSDE110092.231ENSCANG00000035096CSDE19592.231Colobus_angolensis_palliatus
ENSACAG00000003120CSDE19986.004ENSCANG00000031069-9393.585Colobus_angolensis_palliatus
ENSACAG00000003120CSDE110072.807ENSCGRG00001014011-10072.807Cricetulus_griseus_chok1gshd
ENSACAG00000003120CSDE110091.729ENSCGRG00001016833-10091.729Cricetulus_griseus_chok1gshd
ENSACAG00000003120CSDE110072.414ENSCGRG00000005831-10072.414Cricetulus_griseus_crigri
ENSACAG00000003120CSDE19788.196ENSCGRG00000002225-10088.196Cricetulus_griseus_crigri
ENSACAG00000003120CSDE110076.185ENSCSEG00000002620csde110075.875Cynoglossus_semilaevis
ENSACAG00000003120CSDE110079.125ENSCVAG00000001344csde110078.758Cyprinodon_variegatus
ENSACAG00000003120CSDE110079.900ENSDARG00000074758csde110079.900Danio_rerio
ENSACAG00000003120CSDE110088.235ENSDNOG00000010287-9388.235Dasypus_novemcinctus
ENSACAG00000003120CSDE110091.604ENSDORG00000011609Csde110091.604Dipodomys_ordii
ENSACAG00000003120CSDE19549.793FBgn0263352Unr7548.594Drosophila_melanogaster
ENSACAG00000003120CSDE19968.970ENSETEG00000013678-9968.970Echinops_telfairi
ENSACAG00000003120CSDE19395.868ENSETEG00000002491-7495.868Echinops_telfairi
ENSACAG00000003120CSDE19078.130ENSETEG00000006280-10078.130Echinops_telfairi
ENSACAG00000003120CSDE19564.735ENSETEG00000007109-9964.735Echinops_telfairi
ENSACAG00000003120CSDE19955.528ENSEBUG00000008647csde19953.810Eptatretus_burgeri
ENSACAG00000003120CSDE110092.231ENSEASG00005006284CSDE110092.231Equus_asinus_asinus
ENSACAG00000003120CSDE110092.231ENSECAG00000020885CSDE110092.231Equus_caballus
ENSACAG00000003120CSDE19292.670ENSEEUG00000006286CSDE16892.670Erinaceus_europaeus
ENSACAG00000003120CSDE110075.966ENSELUG00000015507csde110074.751Esox_lucius
ENSACAG00000003120CSDE110092.105ENSFCAG00000029266CSDE110088.221Felis_catus
ENSACAG00000003120CSDE110095.854ENSFALG00000003407CSDE110095.854Ficedula_albicollis
ENSACAG00000003120CSDE110091.855ENSFDAG00000007882CSDE110091.855Fukomys_damarensis
ENSACAG00000003120CSDE110079.026ENSFHEG00000010799csde110079.026Fundulus_heteroclitus
ENSACAG00000003120CSDE19978.348ENSGMOG00000012731csde110078.348Gadus_morhua
ENSACAG00000003120CSDE19895.391ENSGALG00000002139CSDE19895.391Gallus_gallus
ENSACAG00000003120CSDE19376.128ENSGAFG00000005241csde19576.128Gambusia_affinis
ENSACAG00000003120CSDE19979.625ENSGACG00000004544csde110079.625Gasterosteus_aculeatus
ENSACAG00000003120CSDE110096.106ENSGAGG00000017685CSDE110096.106Gopherus_agassizii
ENSACAG00000003120CSDE110092.231ENSGGOG00000002164CSDE110088.346Gorilla_gorilla
ENSACAG00000003120CSDE110078.358ENSHBUG00000020315csde110076.500Haplochromis_burtoni
ENSACAG00000003120CSDE19977.399ENSHGLG00000007471-9877.399Heterocephalus_glaber_female
ENSACAG00000003120CSDE19981.777ENSHGLG00000008555-9981.777Heterocephalus_glaber_female
ENSACAG00000003120CSDE110077.068ENSHGLG00000019549-10077.068Heterocephalus_glaber_female
ENSACAG00000003120CSDE19679.955ENSHGLG00000010039-10079.955Heterocephalus_glaber_female
ENSACAG00000003120CSDE110082.957ENSHGLG00000009620-10083.459Heterocephalus_glaber_female
ENSACAG00000003120CSDE110079.323ENSHGLG00000003829-10079.323Heterocephalus_glaber_female
ENSACAG00000003120CSDE19974.153ENSHGLG00000000650-9974.153Heterocephalus_glaber_female
ENSACAG00000003120CSDE19679.955ENSHGLG00100006910-10079.955Heterocephalus_glaber_male
ENSACAG00000003120CSDE19773.051ENSHGLG00100004833-10073.051Heterocephalus_glaber_male
ENSACAG00000003120CSDE19978.598ENSHGLG00100002245-9978.598Heterocephalus_glaber_male
ENSACAG00000003120CSDE19474.799ENSHGLG00100004195-10074.799Heterocephalus_glaber_male
ENSACAG00000003120CSDE110092.105ENSHGLG00100019438-10092.105Heterocephalus_glaber_male
ENSACAG00000003120CSDE19975.410ENSHGLG00100007287-9875.410Heterocephalus_glaber_male
ENSACAG00000003120CSDE110074.937ENSHGLG00100012072-10075.523Heterocephalus_glaber_male
ENSACAG00000003120CSDE110071.930ENSHGLG00100001846-10071.930Heterocephalus_glaber_male
ENSACAG00000003120CSDE110077.625ENSHCOG00000004158csde110075.000Hippocampus_comes
ENSACAG00000003120CSDE110075.187ENSIPUG00000000355csde110075.187Ictalurus_punctatus
ENSACAG00000003120CSDE110075.373ENSSTOG00000030994-10075.373Ictidomys_tridecemlineatus
ENSACAG00000003120CSDE18677.756ENSSTOG00000032722-9877.756Ictidomys_tridecemlineatus
ENSACAG00000003120CSDE110091.604ENSJJAG00000019571Csde110091.604Jaculus_jaculus
ENSACAG00000003120CSDE110078.261ENSKMAG00000005685csde110077.874Kryptolebias_marmoratus
ENSACAG00000003120CSDE110077.927ENSLBEG00000014770csde110077.154Labrus_bergylta
ENSACAG00000003120CSDE110081.017ENSLACG00000018452CSDE19481.017Latimeria_chalumnae
ENSACAG00000003120CSDE110081.932ENSLOCG00000010413csde19481.932Lepisosteus_oculatus
ENSACAG00000003120CSDE110087.218ENSLAFG00000007150CSDE19687.218Loxodonta_africana
ENSACAG00000003120CSDE110092.231ENSMFAG00000003674CSDE110088.346Macaca_fascicularis
ENSACAG00000003120CSDE110092.231ENSMMUG00000001974CSDE110088.346Macaca_mulatta
ENSACAG00000003120CSDE110092.231ENSMNEG00000045247CSDE19592.231Macaca_nemestrina
ENSACAG00000003120CSDE110091.980ENSMLEG00000038673CSDE19591.980Mandrillus_leucophaeus
ENSACAG00000003120CSDE110078.266ENSMAMG00000008821csde110077.375Mastacembelus_armatus
ENSACAG00000003120CSDE110079.125ENSMZEG00005021675csde110076.500Maylandia_zebra
ENSACAG00000003120CSDE19895.391ENSMGAG00000016381CSDE19895.391Meleagris_gallopavo
ENSACAG00000003120CSDE110091.729ENSMAUG00000014031Csde110091.729Mesocricetus_auratus
ENSACAG00000003120CSDE110091.604ENSMICG00000002050CSDE19988.616Microcebus_murinus
ENSACAG00000003120CSDE110091.604ENSMOCG00000018960Csde110091.604Microtus_ochrogaster
ENSACAG00000003120CSDE110076.529ENSMMOG00000015075csde110076.529Mola_mola
ENSACAG00000003120CSDE110093.108ENSMODG00000004685CSDE110093.108Monodelphis_domestica
ENSACAG00000003120CSDE110076.654ENSMALG00000007132csde110076.654Monopterus_albus
ENSACAG00000003120CSDE110091.855MGP_CAROLIEiJ_G0025444Csde19795.890Mus_caroli
ENSACAG00000003120CSDE110091.729ENSMUSG00000068823Csde19795.890Mus_musculus
ENSACAG00000003120CSDE110091.729MGP_PahariEiJ_G0026888Csde19795.890Mus_pahari
ENSACAG00000003120CSDE110091.729MGP_SPRETEiJ_G0026394Csde19795.890Mus_spretus
ENSACAG00000003120CSDE19892.072ENSMPUG00000005753CSDE19992.072Mustela_putorius_furo
ENSACAG00000003120CSDE110087.845ENSMLUG00000005681CSDE19487.845Myotis_lucifugus
ENSACAG00000003120CSDE19763.697ENSNGAG00000012599-10063.697Nannospalax_galili
ENSACAG00000003120CSDE110091.604ENSNGAG00000021929Csde110091.604Nannospalax_galili
ENSACAG00000003120CSDE110076.500ENSNBRG00000020808csde110076.500Neolamprologus_brichardi
ENSACAG00000003120CSDE110092.105ENSNLEG00000004842CSDE19592.105Nomascus_leucogenys
ENSACAG00000003120CSDE19895.146ENSMEUG00000002677CSDE19595.146Notamacropus_eugenii
ENSACAG00000003120CSDE19894.175ENSOPRG00000005002CSDE17694.175Ochotona_princeps
ENSACAG00000003120CSDE110091.855ENSODEG00000007383-10091.855Octodon_degus
ENSACAG00000003120CSDE19761.726ENSODEG00000005979-9861.726Octodon_degus
ENSACAG00000003120CSDE110077.289ENSONIG00000009309csde110077.289Oreochromis_niloticus
ENSACAG00000003120CSDE110077.556ENSOANG00000003346-10077.556Ornithorhynchus_anatinus
ENSACAG00000003120CSDE110091.729ENSOCUG00000016438CSDE19591.729Oryctolagus_cuniculus
ENSACAG00000003120CSDE110077.262ENSORLG00000000707csde110077.262Oryzias_latipes
ENSACAG00000003120CSDE110078.849ENSORLG00020005148csde110077.017Oryzias_latipes_hni
ENSACAG00000003120CSDE110078.849ENSORLG00015019415csde110077.017Oryzias_latipes_hsok
ENSACAG00000003120CSDE110078.875ENSOMEG00000015656csde110077.045Oryzias_melastigma
ENSACAG00000003120CSDE110088.346ENSOGAG00000012127CSDE19488.346Otolemur_garnettii
ENSACAG00000003120CSDE110088.095ENSOARG00000020034CSDE19488.095Ovis_aries
ENSACAG00000003120CSDE110092.231ENSPPAG00000025861CSDE110088.346Pan_paniscus
ENSACAG00000003120CSDE110092.105ENSPPRG00000006747CSDE19592.105Panthera_pardus
ENSACAG00000003120CSDE110092.105ENSPTIG00000015468CSDE110092.105Panthera_tigris_altaica
ENSACAG00000003120CSDE110092.231ENSPTRG00000033721CSDE110092.231Pan_troglodytes
ENSACAG00000003120CSDE110092.231ENSPANG00000018873CSDE110088.346Papio_anubis
ENSACAG00000003120CSDE110075.845ENSPKIG00000009459csde110075.845Paramormyrops_kingsleyae
ENSACAG00000003120CSDE19697.333ENSPSIG00000003823CSDE19697.333Pelodiscus_sinensis
ENSACAG00000003120CSDE110076.250ENSPMGG00000000772csde110076.250Periophthalmus_magnuspinnatus
ENSACAG00000003120CSDE110091.855ENSPEMG00000020357-10091.855Peromyscus_maniculatus_bairdii
ENSACAG00000003120CSDE110093.358ENSPCIG00000022587CSDE110093.358Phascolarctos_cinereus
ENSACAG00000003120CSDE19978.582ENSPFOG00000012664csde110079.193Poecilia_formosa
ENSACAG00000003120CSDE19774.540ENSPLAG00000017680csde19374.540Poecilia_latipinna
ENSACAG00000003120CSDE19874.203ENSPMEG00000005094csde19674.203Poecilia_mexicana
ENSACAG00000003120CSDE110078.889ENSPREG00000011631csde110076.711Poecilia_reticulata
ENSACAG00000003120CSDE110092.105ENSPPYG00000000996CSDE110092.105Pongo_abelii
ENSACAG00000003120CSDE110094.175ENSPCAG00000014368CSDE19094.175Procavia_capensis
ENSACAG00000003120CSDE110091.855ENSPCOG00000017893CSDE110091.855Propithecus_coquereli
ENSACAG00000003120CSDE19082.463ENSPCOG00000008223-9082.463Propithecus_coquereli
ENSACAG00000003120CSDE110082.957ENSPVAG00000008225CSDE19582.957Pteropus_vampyrus
ENSACAG00000003120CSDE110078.358ENSPNYG00000013745csde110076.500Pundamilia_nyererei
ENSACAG00000003120CSDE110078.777ENSPNAG00000001958csde110076.030Pygocentrus_nattereri
ENSACAG00000003120CSDE110091.604ENSRNOG00000061058Csde110091.604Rattus_norvegicus
ENSACAG00000003120CSDE110088.847ENSRBIG00000038088-9988.235Rhinopithecus_bieti
ENSACAG00000003120CSDE110086.859ENSRBIG00000038966-9486.859Rhinopithecus_bieti
ENSACAG00000003120CSDE110092.231ENSRROG00000043101CSDE19592.231Rhinopithecus_roxellana
ENSACAG00000003120CSDE110092.356ENSSBOG00000035592CSDE19592.356Saimiri_boliviensis_boliviensis
ENSACAG00000003120CSDE110089.348ENSSHAG00000009831CSDE110089.348Sarcophilus_harrisii
ENSACAG00000003120CSDE110079.379ENSSFOG00015007498csde110079.726Scleropages_formosus
ENSACAG00000003120CSDE110077.411ENSSMAG00000007203csde110077.411Scophthalmus_maximus
ENSACAG00000003120CSDE110077.900ENSSDUG00000015380csde110077.125Seriola_dumerili
ENSACAG00000003120CSDE110079.750ENSSLDG00000008819csde110079.750Seriola_lalandi_dorsalis
ENSACAG00000003120CSDE110088.596ENSSARG00000000738CSDE19488.596Sorex_araneus
ENSACAG00000003120CSDE110096.482ENSSPUG00000008714CSDE110096.482Sphenodon_punctatus
ENSACAG00000003120CSDE110079.750ENSSPAG00000000716csde110077.125Stegastes_partitus
ENSACAG00000003120CSDE110092.231ENSSSCG00000006752CSDE110088.346Sus_scrofa
ENSACAG00000003120CSDE110094.737ENSTGUG00000000972CSDE110094.737Taeniopygia_guttata
ENSACAG00000003120CSDE110073.935ENSTRUG00000007996csde110073.935Takifugu_rubripes
ENSACAG00000003120CSDE19382.890ENSTNIG00000010878csde110082.890Tetraodon_nigroviridis
ENSACAG00000003120CSDE19397.436ENSTBEG00000011880-6097.436Tupaia_belangeri
ENSACAG00000003120CSDE110087.845ENSTTRG00000015583CSDE19487.845Tursiops_truncatus
ENSACAG00000003120CSDE19082.975ENSUAMG00000024289-9982.975Ursus_americanus
ENSACAG00000003120CSDE19496.040ENSUAMG00000021779-9796.040Ursus_americanus
ENSACAG00000003120CSDE110081.454ENSUMAG00000009720-9781.454Ursus_maritimus
ENSACAG00000003120CSDE19788.124ENSUMAG00000011714-9988.124Ursus_maritimus
ENSACAG00000003120CSDE110091.080ENSVPAG00000000749CSDE17991.080Vicugna_pacos
ENSACAG00000003120CSDE19091.667ENSVVUG00000009890CSDE19491.667Vulpes_vulpes
ENSACAG00000003120CSDE110087.266ENSXETG00000021448csde110087.266Xenopus_tropicalis
ENSACAG00000003120CSDE19487.273ENSXCOG00000000035csde19987.273Xiphophorus_couchianus
ENSACAG00000003120CSDE110079.775ENSXMAG00000009080csde110077.549Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us