EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000003640 (Gene tree)
Gene ID: 100552179
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 29692 bases
Position: chr2:52118715-52148406
Accession: 100552179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000003555	RTC	PF01137.21	4.1e-62	1	1
ENSACAP00000003555	RTC_insert	PF05189.13	5.3e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000003643	RCL1-201	2683	XM_003216491	ENSACAP00000003555	373 (aa)	XP_003216539	G1KC43

Gene Model

Click here to download ENSACAG00000003640's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000003640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000003640	RCL1	100	85.255	ENSG00000120158	RCL1	100	85.581	Homo_sapiens
ENSACAG00000003640	RCL1	100	74.599	ENSAPOG00000015666	rcl1	100	74.599	Acanthochromis_polyacanthus
ENSACAG00000003640	RCL1	100	85.255	ENSAMEG00000002631	RCL1	100	85.255	Ailuropoda_melanoleuca
ENSACAG00000003640	RCL1	99	74.595	ENSACIG00000021195	rcl1	99	74.595	Amphilophus_citrinellus
ENSACAG00000003640	RCL1	100	73.529	ENSAOCG00000002223	rcl1	100	73.529	Amphiprion_ocellaris
ENSACAG00000003640	RCL1	100	73.797	ENSAPEG00000006905	rcl1	100	73.797	Amphiprion_percula
ENSACAG00000003640	RCL1	99	72.162	ENSATEG00000020026	rcl1	99	72.162	Anabas_testudineus
ENSACAG00000003640	RCL1	88	85.671	ENSAPLG00000006031	RCL1	100	85.671	Anas_platyrhynchos
ENSACAG00000003640	RCL1	100	84.718	ENSANAG00000037372	RCL1	100	84.718	Aotus_nancymaae
ENSACAG00000003640	RCL1	99	74.054	ENSACLG00000021724	rcl1	99	74.054	Astatotilapia_calliptera
ENSACAG00000003640	RCL1	98	74.457	ENSAMXG00000033394	rcl1	99	74.457	Astyanax_mexicanus
ENSACAG00000003640	RCL1	99	43.351	WBGene00022852	ZK1127.5	99	43.351	Caenorhabditis_elegans
ENSACAG00000003640	RCL1	100	84.987	ENSCJAG00000011202	RCL1	100	84.987	Callithrix_jacchus
ENSACAG00000003640	RCL1	100	85.255	ENSCAFG00000002091	RCL1	100	85.255	Canis_familiaris
ENSACAG00000003640	RCL1	100	84.987	ENSCAFG00020000638	RCL1	78	84.987	Canis_lupus_dingo
ENSACAG00000003640	RCL1	100	86.059	ENSCHIG00000012407	RCL1	100	86.059	Capra_hircus
ENSACAG00000003640	RCL1	88	86.239	ENSTSYG00000009592	RCL1	97	86.740	Carlito_syrichta
ENSACAG00000003640	RCL1	66	72.222	ENSCAPG00000013575	RCL1	100	72.222	Cavia_aperea
ENSACAG00000003640	RCL1	100	84.718	ENSCPOG00000015354	RCL1	100	84.718	Cavia_porcellus
ENSACAG00000003640	RCL1	100	84.987	ENSCCAG00000033505	RCL1	100	84.987	Cebus_capucinus
ENSACAG00000003640	RCL1	100	84.718	ENSCATG00000034721	RCL1	100	84.718	Cercocebus_atys
ENSACAG00000003640	RCL1	100	84.718	ENSCLAG00000007445	RCL1	100	84.718	Chinchilla_lanigera
ENSACAG00000003640	RCL1	100	84.987	ENSCSAG00000008811	RCL1	100	84.987	Chlorocebus_sabaeus
ENSACAG00000003640	RCL1	87	72.446	ENSCHOG00000007216	RCL1	100	72.446	Choloepus_hoffmanni
ENSACAG00000003640	RCL1	100	87.399	ENSCPBG00000025481	RCL1	94	86.930	Chrysemys_picta_bellii
ENSACAG00000003640	RCL1	98	58.108	ENSCING00000019565	-	98	58.108	Ciona_intestinalis
ENSACAG00000003640	RCL1	100	84.987	ENSCANG00000027099	RCL1	100	84.987	Colobus_angolensis_palliatus
ENSACAG00000003640	RCL1	100	85.523	ENSCGRG00001013748	Rcl1	100	85.523	Cricetulus_griseus_chok1gshd
ENSACAG00000003640	RCL1	88	86.280	ENSCGRG00000005843	Rcl1	99	86.280	Cricetulus_griseus_crigri
ENSACAG00000003640	RCL1	99	73.514	ENSCSEG00000000712	rcl1	97	73.514	Cynoglossus_semilaevis
ENSACAG00000003640	RCL1	99	75.135	ENSCVAG00000011536	rcl1	99	75.135	Cyprinodon_variegatus
ENSACAG00000003640	RCL1	98	71.662	ENSDARG00000038312	rcl1	100	71.662	Danio_rerio
ENSACAG00000003640	RCL1	71	84.528	ENSDNOG00000019911	RCL1	100	85.581	Dasypus_novemcinctus
ENSACAG00000003640	RCL1	100	84.718	ENSDORG00000015645	Rcl1	100	84.718	Dipodomys_ordii
ENSACAG00000003640	RCL1	99	52.632	FBgn0020909	Rtc1	99	52.632	Drosophila_melanogaster
ENSACAG00000003640	RCL1	72	91.304	ENSETEG00000014087	-	82	91.304	Echinops_telfairi
ENSACAG00000003640	RCL1	98	52.174	ENSEBUG00000016621	-	98	52.174	Eptatretus_burgeri
ENSACAG00000003640	RCL1	100	85.523	ENSEASG00005010653	RCL1	100	85.523	Equus_asinus_asinus
ENSACAG00000003640	RCL1	100	85.523	ENSECAG00000015973	RCL1	100	85.523	Equus_caballus
ENSACAG00000003640	RCL1	100	73.458	ENSEEUG00000009801	RCL1	100	73.458	Erinaceus_europaeus
ENSACAG00000003640	RCL1	100	70.321	ENSELUG00000007353	rcl1	100	70.321	Esox_lucius
ENSACAG00000003640	RCL1	100	85.255	ENSFCAG00000014557	RCL1	100	85.255	Felis_catus
ENSACAG00000003640	RCL1	95	79.437	ENSFALG00000010553	RCL1	94	79.437	Ficedula_albicollis
ENSACAG00000003640	RCL1	88	83.792	ENSFDAG00000004209	RCL1	100	83.792	Fukomys_damarensis
ENSACAG00000003640	RCL1	99	75.135	ENSFHEG00000011228	rcl1	99	75.135	Fundulus_heteroclitus
ENSACAG00000003640	RCL1	99	73.243	ENSGMOG00000004677	rcl1	99	73.243	Gadus_morhua
ENSACAG00000003640	RCL1	99	84.553	ENSGALG00000015024	RCL1	99	84.553	Gallus_gallus
ENSACAG00000003640	RCL1	99	73.514	ENSGAFG00000007257	rcl1	99	73.514	Gambusia_affinis
ENSACAG00000003640	RCL1	100	71.925	ENSGACG00000017474	rcl1	100	71.925	Gasterosteus_aculeatus
ENSACAG00000003640	RCL1	100	87.399	ENSGAGG00000003689	RCL1	100	87.399	Gopherus_agassizii
ENSACAG00000003640	RCL1	100	85.255	ENSGGOG00000015041	RCL1	100	85.255	Gorilla_gorilla
ENSACAG00000003640	RCL1	99	73.784	ENSHBUG00000001393	rcl1	99	73.784	Haplochromis_burtoni
ENSACAG00000003640	RCL1	100	84.182	ENSHGLG00000016452	RCL1	100	84.182	Heterocephalus_glaber_female
ENSACAG00000003640	RCL1	100	71.314	ENSHGLG00000005368	-	100	71.314	Heterocephalus_glaber_female
ENSACAG00000003640	RCL1	100	72.118	ENSHGLG00100018010	-	100	72.118	Heterocephalus_glaber_male
ENSACAG00000003640	RCL1	100	78.016	ENSHGLG00100008718	-	100	78.016	Heterocephalus_glaber_male
ENSACAG00000003640	RCL1	99	74.054	ENSHCOG00000020170	rcl1	99	74.054	Hippocampus_comes
ENSACAG00000003640	RCL1	98	74.457	ENSIPUG00000018054	RCL1	99	74.457	Ictalurus_punctatus
ENSACAG00000003640	RCL1	100	86.059	ENSSTOG00000000023	RCL1	100	86.059	Ictidomys_tridecemlineatus
ENSACAG00000003640	RCL1	100	74.263	ENSJJAG00000015632	-	100	74.263	Jaculus_jaculus
ENSACAG00000003640	RCL1	100	84.450	ENSJJAG00000022803	-	100	84.450	Jaculus_jaculus
ENSACAG00000003640	RCL1	54	63.184	ENSJJAG00000000764	-	98	63.184	Jaculus_jaculus
ENSACAG00000003640	RCL1	99	73.784	ENSKMAG00000011946	rcl1	99	73.784	Kryptolebias_marmoratus
ENSACAG00000003640	RCL1	99	69.730	ENSLBEG00000003957	rcl1	99	69.730	Labrus_bergylta
ENSACAG00000003640	RCL1	91	77.126	ENSLACG00000004594	RCL1	99	80.938	Latimeria_chalumnae
ENSACAG00000003640	RCL1	100	78.820	ENSLOCG00000010148	rcl1	98	78.820	Lepisosteus_oculatus
ENSACAG00000003640	RCL1	100	83.646	ENSLAFG00000017495	RCL1	100	83.646	Loxodonta_africana
ENSACAG00000003640	RCL1	100	84.987	ENSMFAG00000037906	RCL1	100	84.987	Macaca_fascicularis
ENSACAG00000003640	RCL1	100	84.987	ENSMNEG00000012288	RCL1	100	84.987	Macaca_nemestrina
ENSACAG00000003640	RCL1	100	84.987	ENSMLEG00000043088	RCL1	100	84.987	Mandrillus_leucophaeus
ENSACAG00000003640	RCL1	99	74.054	ENSMAMG00000008311	rcl1	99	74.054	Mastacembelus_armatus
ENSACAG00000003640	RCL1	99	74.054	ENSMZEG00005017292	rcl1	99	74.054	Maylandia_zebra
ENSACAG00000003640	RCL1	58	82.648	ENSMGAG00000002245	RCL1	100	82.648	Meleagris_gallopavo
ENSACAG00000003640	RCL1	58	86.977	ENSMAUG00000008922	Rcl1	100	86.977	Mesocricetus_auratus
ENSACAG00000003640	RCL1	100	85.255	ENSMICG00000015562	RCL1	100	85.255	Microcebus_murinus
ENSACAG00000003640	RCL1	100	85.255	ENSMOCG00000012145	Rcl1	100	85.255	Microtus_ochrogaster
ENSACAG00000003640	RCL1	99	70.350	ENSMMOG00000021264	rcl1	99	70.350	Mola_mola
ENSACAG00000003640	RCL1	95	86.197	ENSMODG00000015377	RCL1	94	86.197	Monodelphis_domestica
ENSACAG00000003640	RCL1	99	72.703	ENSMALG00000018618	rcl1	99	72.703	Monopterus_albus
ENSACAG00000003640	RCL1	100	85.523	MGP_CAROLIEiJ_G0022853	Rcl1	100	85.523	Mus_caroli
ENSACAG00000003640	RCL1	100	85.523	ENSMUSG00000024785	Rcl1	100	85.523	Mus_musculus
ENSACAG00000003640	RCL1	100	85.523	MGP_PahariEiJ_G0014346	Rcl1	100	89.412	Mus_pahari
ENSACAG00000003640	RCL1	100	85.523	MGP_SPRETEiJ_G0023771	Rcl1	100	88.824	Mus_spretus
ENSACAG00000003640	RCL1	100	84.182	ENSMPUG00000004998	RCL1	100	84.182	Mustela_putorius_furo
ENSACAG00000003640	RCL1	100	85.523	ENSMLUG00000009654	RCL1	100	85.523	Myotis_lucifugus
ENSACAG00000003640	RCL1	100	84.182	ENSNGAG00000015327	Rcl1	100	84.182	Nannospalax_galili
ENSACAG00000003640	RCL1	92	72.886	ENSNBRG00000019854	rcl1	96	70.670	Neolamprologus_brichardi
ENSACAG00000003640	RCL1	100	82.306	ENSNLEG00000008891	RCL1	100	82.306	Nomascus_leucogenys
ENSACAG00000003640	RCL1	100	80.697	ENSMEUG00000007653	RCL1	100	80.697	Notamacropus_eugenii
ENSACAG00000003640	RCL1	100	85.523	ENSOPRG00000010965	RCL1	100	85.523	Ochotona_princeps
ENSACAG00000003640	RCL1	88	70.732	ENSODEG00000004151	RCL1	96	70.732	Octodon_degus
ENSACAG00000003640	RCL1	99	73.784	ENSONIG00000003871	rcl1	99	73.784	Oreochromis_niloticus
ENSACAG00000003640	RCL1	67	82.609	ENSOANG00000013193	-	100	82.609	Ornithorhynchus_anatinus
ENSACAG00000003640	RCL1	100	85.255	ENSOCUG00000008161	RCL1	100	85.255	Oryctolagus_cuniculus
ENSACAG00000003640	RCL1	100	72.995	ENSORLG00000010443	rcl1	100	72.995	Oryzias_latipes
ENSACAG00000003640	RCL1	100	72.995	ENSORLG00020012211	rcl1	100	72.995	Oryzias_latipes_hni
ENSACAG00000003640	RCL1	100	72.727	ENSORLG00015001122	rcl1	100	72.727	Oryzias_latipes_hsok
ENSACAG00000003640	RCL1	100	73.797	ENSOMEG00000022976	rcl1	88	73.797	Oryzias_melastigma
ENSACAG00000003640	RCL1	100	83.646	ENSOGAG00000007480	RCL1	100	83.646	Otolemur_garnettii
ENSACAG00000003640	RCL1	100	85.791	ENSOARG00000013463	RCL1	100	85.791	Ovis_aries
ENSACAG00000003640	RCL1	100	85.523	ENSPPAG00000037958	RCL1	100	85.523	Pan_paniscus
ENSACAG00000003640	RCL1	100	84.450	ENSPPRG00000022645	RCL1	100	84.450	Panthera_pardus
ENSACAG00000003640	RCL1	87	85.583	ENSPTIG00000019031	RCL1	100	85.116	Panthera_tigris_altaica
ENSACAG00000003640	RCL1	100	85.255	ENSPTRG00000020743	RCL1	100	85.255	Pan_troglodytes
ENSACAG00000003640	RCL1	100	84.987	ENSPANG00000025151	RCL1	100	84.987	Papio_anubis
ENSACAG00000003640	RCL1	100	73.529	ENSPKIG00000021022	rcl1	100	73.529	Paramormyrops_kingsleyae
ENSACAG00000003640	RCL1	88	87.195	ENSPSIG00000012302	RCL1	100	87.195	Pelodiscus_sinensis
ENSACAG00000003640	RCL1	100	72.460	ENSPMGG00000024007	rcl1	100	72.460	Periophthalmus_magnuspinnatus
ENSACAG00000003640	RCL1	100	85.791	ENSPEMG00000023275	Rcl1	100	85.791	Peromyscus_maniculatus_bairdii
ENSACAG00000003640	RCL1	100	86.863	ENSPCIG00000000188	RCL1	100	86.863	Phascolarctos_cinereus
ENSACAG00000003640	RCL1	99	73.784	ENSPFOG00000019682	rcl1	99	73.784	Poecilia_formosa
ENSACAG00000003640	RCL1	99	73.784	ENSPLAG00000022354	rcl1	99	73.784	Poecilia_latipinna
ENSACAG00000003640	RCL1	99	73.784	ENSPMEG00000008131	rcl1	99	73.784	Poecilia_mexicana
ENSACAG00000003640	RCL1	99	73.514	ENSPREG00000008032	rcl1	99	73.514	Poecilia_reticulata
ENSACAG00000003640	RCL1	100	85.523	ENSPPYG00000019244	RCL1	100	85.523	Pongo_abelii
ENSACAG00000003640	RCL1	100	77.748	ENSPCAG00000001440	RCL1	100	77.748	Procavia_capensis
ENSACAG00000003640	RCL1	100	85.523	ENSPCOG00000009611	RCL1	100	85.523	Propithecus_coquereli
ENSACAG00000003640	RCL1	100	86.059	ENSPVAG00000015752	RCL1	100	86.059	Pteropus_vampyrus
ENSACAG00000003640	RCL1	99	74.054	ENSPNYG00000012910	rcl1	99	74.054	Pundamilia_nyererei
ENSACAG00000003640	RCL1	99	74.394	ENSPNAG00000028307	rcl1	91	74.394	Pygocentrus_nattereri
ENSACAG00000003640	RCL1	100	84.718	ENSRNOG00000015491	Rcl1	100	84.718	Rattus_norvegicus
ENSACAG00000003640	RCL1	100	84.718	ENSRBIG00000035818	RCL1	100	84.718	Rhinopithecus_bieti
ENSACAG00000003640	RCL1	100	84.987	ENSRROG00000029781	RCL1	100	84.987	Rhinopithecus_roxellana
ENSACAG00000003640	RCL1	98	36.702	YOL010W	-	97	36.702	Saccharomyces_cerevisiae
ENSACAG00000003640	RCL1	100	84.987	ENSSBOG00000026369	RCL1	100	84.987	Saimiri_boliviensis_boliviensis
ENSACAG00000003640	RCL1	88	86.364	ENSSHAG00000014086	RCL1	100	86.364	Sarcophilus_harrisii
ENSACAG00000003640	RCL1	100	74.599	ENSSFOG00015023020	rcl1	100	74.599	Scleropages_formosus
ENSACAG00000003640	RCL1	99	73.784	ENSSMAG00000019751	rcl1	85	73.784	Scophthalmus_maximus
ENSACAG00000003640	RCL1	100	73.797	ENSSDUG00000006349	rcl1	100	73.797	Seriola_dumerili
ENSACAG00000003640	RCL1	100	73.529	ENSSLDG00000022076	rcl1	100	73.529	Seriola_lalandi_dorsalis
ENSACAG00000003640	RCL1	100	85.255	ENSSARG00000009260	RCL1	100	85.255	Sorex_araneus
ENSACAG00000003640	RCL1	100	87.131	ENSSPUG00000016330	RCL1	100	87.131	Sphenodon_punctatus
ENSACAG00000003640	RCL1	100	74.332	ENSSPAG00000018038	rcl1	100	74.332	Stegastes_partitus
ENSACAG00000003640	RCL1	100	85.791	ENSSSCG00000005217	RCL1	83	85.791	Sus_scrofa
ENSACAG00000003640	RCL1	100	82.667	ENSTGUG00000005138	RCL1	100	82.667	Taeniopygia_guttata
ENSACAG00000003640	RCL1	99	74.054	ENSTRUG00000010493	rcl1	99	74.054	Takifugu_rubripes
ENSACAG00000003640	RCL1	99	74.054	ENSTNIG00000013214	rcl1	99	74.054	Tetraodon_nigroviridis
ENSACAG00000003640	RCL1	100	80.429	ENSTBEG00000016339	RCL1	100	80.429	Tupaia_belangeri
ENSACAG00000003640	RCL1	100	84.718	ENSTTRG00000016525	RCL1	100	84.718	Tursiops_truncatus
ENSACAG00000003640	RCL1	100	85.255	ENSUAMG00000005598	RCL1	100	85.802	Ursus_americanus
ENSACAG00000003640	RCL1	88	85.015	ENSUMAG00000017890	RCL1	97	85.015	Ursus_maritimus
ENSACAG00000003640	RCL1	88	86.544	ENSVPAG00000009188	RCL1	100	86.544	Vicugna_pacos
ENSACAG00000003640	RCL1	88	85.976	ENSVVUG00000007304	RCL1	89	85.976	Vulpes_vulpes
ENSACAG00000003640	RCL1	100	72.727	ENSXETG00000000592	rcl1	100	72.727	Xenopus_tropicalis
ENSACAG00000003640	RCL1	99	73.784	ENSXCOG00000004922	rcl1	99	73.784	Xiphophorus_couchianus
ENSACAG00000003640	RCL1	99	73.784	ENSXMAG00000022366	RCL1	99	73.784	Xiphophorus_maculatus