EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000003671 (Gene tree)
Gene ID: 100560445
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 39383 bases
Position: chr4:18975516-19014898
Accession: 100560445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000003616	ResIII	PF04851.15	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000003704	-	2943	XM_008108399	ENSACAP00000003616	798 (aa)	-	G1KC65

Gene Model

Click here to download ENSACAG00000003671's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000003671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000003671	-	66	31.729	ENSACAG00000028866	-	75	31.729
ENSACAG00000003671	-	71	31.379	ENSACAG00000012947	ERCC6L2	89	31.379
ENSACAG00000003671	-	66	31.729	ENSACAG00000029354	-	78	31.729
ENSACAG00000003671	-	85	41.571	ENSACAG00000002312	RAD54L	89	41.345

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000003671	-	99	71.106	ENSG00000197275	RAD54B	87	71.106	Homo_sapiens
ENSACAG00000003671	-	90	70.702	ENSG00000265817	FSBP	100	70.702	Homo_sapiens
ENSACAG00000003671	-	99	71.843	ENSAMEG00000005834	-	87	71.843	Ailuropoda_melanoleuca
ENSACAG00000003671	-	98	59.949	ENSACIG00000013005	rad54b	89	59.949	Amphilophus_citrinellus
ENSACAG00000003671	-	98	60.177	ENSAOCG00000008523	rad54b	85	60.177	Amphiprion_ocellaris
ENSACAG00000003671	-	98	58.786	ENSAPEG00000001673	rad54b	89	58.786	Amphiprion_percula
ENSACAG00000003671	-	98	60.606	ENSATEG00000001527	rad54b	91	60.556	Anabas_testudineus
ENSACAG00000003671	-	98	77.904	ENSAPLG00000014366	-	86	77.904	Anas_platyrhynchos
ENSACAG00000003671	-	81	70.769	ENSANAG00000019528	-	100	70.769	Aotus_nancymaae
ENSACAG00000003671	-	98	60.025	ENSACLG00000007826	rad54b	91	60.025	Astatotilapia_calliptera
ENSACAG00000003671	-	97	59.949	ENSAMXG00000039985	rad54b	94	59.873	Astyanax_mexicanus
ENSACAG00000003671	-	99	71.250	ENSBTAG00000000632	RAD54B	88	71.250	Bos_taurus
ENSACAG00000003671	-	97	32.474	WBGene00013792	Y116A8C.13	97	31.925	Caenorhabditis_elegans
ENSACAG00000003671	-	99	70.891	ENSCJAG00000000080	-	100	70.604	Callithrix_jacchus
ENSACAG00000003671	-	99	71.717	ENSCAFG00000009179	RAD54B	87	71.717	Canis_familiaris
ENSACAG00000003671	-	99	71.465	ENSCAFG00020012084	-	87	71.465	Canis_lupus_dingo
ENSACAG00000003671	-	99	71.000	ENSCHIG00000008230	-	88	71.000	Capra_hircus
ENSACAG00000003671	-	99	71.214	ENSTSYG00000013234	-	88	71.214	Carlito_syrichta
ENSACAG00000003671	-	99	70.088	ENSCPOG00000011643	-	89	70.088	Cavia_porcellus
ENSACAG00000003671	-	99	70.765	ENSCCAG00000011754	-	100	70.467	Cebus_capucinus
ENSACAG00000003671	-	99	71.106	ENSCATG00000030661	-	100	70.702	Cercocebus_atys
ENSACAG00000003671	-	99	70.588	ENSCLAG00000010476	-	90	70.588	Chinchilla_lanigera
ENSACAG00000003671	-	99	71.106	ENSCSAG00000012712	-	87	71.106	Chlorocebus_sabaeus
ENSACAG00000003671	-	98	79.167	ENSCPBG00000003204	-	85	80.966	Chrysemys_picta_bellii
ENSACAG00000003671	-	99	71.357	ENSCANG00000017939	-	100	70.839	Colobus_angolensis_palliatus
ENSACAG00000003671	-	99	68.461	ENSCGRG00001020184	Rad54b	91	68.461	Cricetulus_griseus_chok1gshd
ENSACAG00000003671	-	99	67.584	ENSCGRG00000016752	Rad54b	90	67.584	Cricetulus_griseus_crigri
ENSACAG00000003671	-	98	58.438	ENSCSEG00000001601	rad54b	93	58.438	Cynoglossus_semilaevis
ENSACAG00000003671	-	98	62.563	ENSCVAG00000009200	rad54b	89	62.563	Cyprinodon_variegatus
ENSACAG00000003671	-	98	57.855	ENSDARG00000092134	rad54b	99	59.375	Danio_rerio
ENSACAG00000003671	-	99	71.000	ENSDNOG00000015535	-	88	71.000	Dasypus_novemcinctus
ENSACAG00000003671	-	99	68.711	ENSDORG00000002492	Rad54b	91	68.711	Dipodomys_ordii
ENSACAG00000003671	-	85	73.275	ENSETEG00000010605	-	87	73.275	Echinops_telfairi
ENSACAG00000003671	-	99	50.000	ENSEBUG00000009104	rad54b	85	50.000	Eptatretus_burgeri
ENSACAG00000003671	-	99	70.088	ENSEASG00005004021	-	90	70.088	Equus_asinus_asinus
ENSACAG00000003671	-	99	70.213	ENSECAG00000021949	-	93	70.213	Equus_caballus
ENSACAG00000003671	-	81	65.605	ENSEEUG00000008056	-	72	65.605	Erinaceus_europaeus
ENSACAG00000003671	-	97	59.949	ENSELUG00000009287	rad54b	83	59.949	Esox_lucius
ENSACAG00000003671	-	99	71.429	ENSFCAG00000015513	-	99	71.231	Felis_catus
ENSACAG00000003671	-	98	76.389	ENSFALG00000005467	-	86	76.389	Ficedula_albicollis
ENSACAG00000003671	-	99	70.088	ENSFDAG00000020541	-	88	70.088	Fukomys_damarensis
ENSACAG00000003671	-	98	60.000	ENSFHEG00000014382	rad54b	87	60.101	Fundulus_heteroclitus
ENSACAG00000003671	-	97	59.062	ENSGMOG00000014774	rad54b	98	59.062	Gadus_morhua
ENSACAG00000003671	-	99	75.594	ENSGALG00000043597	RAD54B	87	75.594	Gallus_gallus
ENSACAG00000003671	-	98	60.710	ENSGAFG00000007901	rad54b	92	60.483	Gambusia_affinis
ENSACAG00000003671	-	98	59.949	ENSGACG00000009128	rad54b	86	59.949	Gasterosteus_aculeatus
ENSACAG00000003671	-	99	78.043	ENSGAGG00000018747	-	87	78.043	Gopherus_agassizii
ENSACAG00000003671	-	99	71.338	ENSGGOG00000023516	-	87	71.338	Gorilla_gorilla
ENSACAG00000003671	-	98	59.949	ENSHBUG00000016017	rad54b	84	59.949	Haplochromis_burtoni
ENSACAG00000003671	-	99	69.068	ENSHGLG00000008263	RAD54B	87	69.068	Heterocephalus_glaber_female
ENSACAG00000003671	-	99	68.311	ENSHGLG00100008108	-	87	68.311	Heterocephalus_glaber_male
ENSACAG00000003671	-	99	58.531	ENSHCOG00000004764	rad54b	98	57.072	Hippocampus_comes
ENSACAG00000003671	-	98	59.119	ENSIPUG00000018531	rad54b	84	59.119	Ictalurus_punctatus
ENSACAG00000003671	-	99	69.260	ENSSTOG00000010791	-	87	69.260	Ictidomys_tridecemlineatus
ENSACAG00000003671	-	99	69.925	ENSJJAG00000010314	Rad54b	88	69.925	Jaculus_jaculus
ENSACAG00000003671	-	97	58.987	ENSKMAG00000004744	rad54b	91	58.987	Kryptolebias_marmoratus
ENSACAG00000003671	-	92	69.559	ENSLACG00000000859	-	99	69.559	Latimeria_chalumnae
ENSACAG00000003671	-	98	65.119	ENSLOCG00000010100	rad54b	93	65.316	Lepisosteus_oculatus
ENSACAG00000003671	-	99	69.571	ENSLAFG00000015315	-	98	69.571	Loxodonta_africana
ENSACAG00000003671	-	99	70.980	ENSMFAG00000031629	-	100	70.564	Macaca_fascicularis
ENSACAG00000003671	-	99	70.980	ENSMMUG00000005659	-	87	70.980	Macaca_mulatta
ENSACAG00000003671	-	99	70.729	ENSMNEG00000016408	-	87	70.729	Macaca_nemestrina
ENSACAG00000003671	-	99	71.106	ENSMLEG00000006946	-	87	71.106	Mandrillus_leucophaeus
ENSACAG00000003671	-	98	59.826	ENSMAMG00000012269	rad54b	90	59.826	Mastacembelus_armatus
ENSACAG00000003671	-	98	60.025	ENSMZEG00005005281	rad54b	95	60.025	Maylandia_zebra
ENSACAG00000003671	-	99	75.469	ENSMGAG00000012024	-	87	75.469	Meleagris_gallopavo
ENSACAG00000003671	-	99	69.444	ENSMAUG00000013586	Rad54b	90	69.444	Mesocricetus_auratus
ENSACAG00000003671	-	99	70.713	ENSMICG00000000754	-	92	70.713	Microcebus_murinus
ENSACAG00000003671	-	99	67.955	ENSMOCG00000020035	Rad54b	89	68.080	Microtus_ochrogaster
ENSACAG00000003671	-	98	60.102	ENSMMOG00000003394	rad54b	89	60.102	Mola_mola
ENSACAG00000003671	-	98	71.465	ENSMODG00000007343	-	97	71.465	Monodelphis_domestica
ENSACAG00000003671	-	80	59.876	ENSMALG00000001520	rad54b	99	59.876	Monopterus_albus
ENSACAG00000003671	-	99	68.867	MGP_CAROLIEiJ_G0025810	Rad54b	90	68.867	Mus_caroli
ENSACAG00000003671	-	99	68.618	ENSMUSG00000078773	Rad54b	90	68.618	Mus_musculus
ENSACAG00000003671	-	99	68.867	MGP_PahariEiJ_G0023933	Rad54b	89	68.867	Mus_pahari
ENSACAG00000003671	-	99	69.489	MGP_SPRETEiJ_G0026758	Rad54b	90	69.489	Mus_spretus
ENSACAG00000003671	-	99	71.086	ENSMPUG00000008878	-	98	71.086	Mustela_putorius_furo
ENSACAG00000003671	-	99	70.964	ENSMLUG00000008953	-	88	70.964	Myotis_lucifugus
ENSACAG00000003671	-	99	69.145	ENSNGAG00000017537	Rad54b	89	69.145	Nannospalax_galili
ENSACAG00000003671	-	98	60.152	ENSNBRG00000013394	rad54b	91	60.152	Neolamprologus_brichardi
ENSACAG00000003671	-	99	71.106	ENSNLEG00000003062	-	99	70.702	Nomascus_leucogenys
ENSACAG00000003671	-	79	69.430	ENSMEUG00000012426	-	69	69.430	Notamacropus_eugenii
ENSACAG00000003671	-	99	69.837	ENSODEG00000019564	-	88	69.837	Octodon_degus
ENSACAG00000003671	-	99	65.332	ENSODEG00000002650	-	94	73.333	Octodon_degus
ENSACAG00000003671	-	98	60.203	ENSONIG00000006067	rad54b	86	60.203	Oreochromis_niloticus
ENSACAG00000003671	-	93	72.326	ENSOANG00000011348	-	99	72.326	Ornithorhynchus_anatinus
ENSACAG00000003671	-	99	69.444	ENSOCUG00000016478	-	87	69.444	Oryctolagus_cuniculus
ENSACAG00000003671	-	98	60.914	ENSORLG00000008918	rad54b	99	61.669	Oryzias_latipes
ENSACAG00000003671	-	80	61.515	ENSORLG00020012171	rad54b	99	61.515	Oryzias_latipes_hni
ENSACAG00000003671	-	98	61.343	ENSORLG00015018536	rad54b	84	61.343	Oryzias_latipes_hsok
ENSACAG00000003671	-	95	60.208	ENSOMEG00000004345	rad54b	99	60.208	Oryzias_melastigma
ENSACAG00000003671	-	99	69.962	ENSOGAG00000007854	-	88	69.962	Otolemur_garnettii
ENSACAG00000003671	-	99	70.112	ENSOARG00000007691	-	99	70.112	Ovis_aries
ENSACAG00000003671	-	99	69.849	ENSPPAG00000029572	-	87	69.849	Pan_paniscus
ENSACAG00000003671	-	99	71.554	ENSPPRG00000007571	-	99	71.369	Panthera_pardus
ENSACAG00000003671	-	90	71.231	ENSPTIG00000012670	-	99	71.231	Panthera_tigris_altaica
ENSACAG00000003671	-	99	70.980	ENSPTRG00000020427	-	100	70.564	Pan_troglodytes
ENSACAG00000003671	-	99	71.106	ENSPANG00000019566	-	87	71.106	Papio_anubis
ENSACAG00000003671	-	98	63.970	ENSPKIG00000014974	rad54b	86	63.752	Paramormyrops_kingsleyae
ENSACAG00000003671	-	98	77.456	ENSPSIG00000002383	-	97	77.456	Pelodiscus_sinensis
ENSACAG00000003671	-	99	69.549	ENSPEMG00000012133	Rad54b	89	69.549	Peromyscus_maniculatus_bairdii
ENSACAG00000003671	-	98	60.177	ENSPMAG00000002916	rad54b	98	60.177	Petromyzon_marinus
ENSACAG00000003671	-	98	72.392	ENSPCIG00000020151	-	92	72.010	Phascolarctos_cinereus
ENSACAG00000003671	-	98	61.090	ENSPFOG00000023411	rad54b	84	61.090	Poecilia_formosa
ENSACAG00000003671	-	98	61.217	ENSPLAG00000010430	rad54b	84	61.217	Poecilia_latipinna
ENSACAG00000003671	-	98	61.090	ENSPMEG00000016873	rad54b	93	60.814	Poecilia_mexicana
ENSACAG00000003671	-	98	60.963	ENSPREG00000018443	rad54b	90	60.864	Poecilia_reticulata
ENSACAG00000003671	-	99	71.106	ENSPPYG00000018750	-	87	71.106	Pongo_abelii
ENSACAG00000003671	-	99	70.839	ENSPCOG00000026845	-	99	70.678	Propithecus_coquereli
ENSACAG00000003671	-	92	69.730	ENSPVAG00000000261	-	85	69.730	Pteropus_vampyrus
ENSACAG00000003671	-	99	59.649	ENSPNYG00000018303	rad54b	97	59.649	Pundamilia_nyererei
ENSACAG00000003671	-	98	59.698	ENSPNAG00000000295	rad54b	93	59.217	Pygocentrus_nattereri
ENSACAG00000003671	-	99	67.618	ENSRNOG00000039949	Rad54b	90	67.618	Rattus_norvegicus
ENSACAG00000003671	-	99	71.231	ENSRBIG00000020419	-	87	71.231	Rhinopithecus_bieti
ENSACAG00000003671	-	99	71.106	ENSRROG00000039897	-	87	71.106	Rhinopithecus_roxellana
ENSACAG00000003671	-	97	36.652	YBR073W	RDH54	88	37.217	Saccharomyces_cerevisiae
ENSACAG00000003671	-	99	70.765	ENSSBOG00000028501	-	87	70.765	Saimiri_boliviensis_boliviensis
ENSACAG00000003671	-	99	71.536	ENSSHAG00000017038	-	88	71.536	Sarcophilus_harrisii
ENSACAG00000003671	-	75	64.597	ENSSFOG00015008483	rad54b	92	64.597	Scleropages_formosus
ENSACAG00000003671	-	97	61.529	ENSSMAG00000018659	rad54b	90	60.714	Scophthalmus_maximus
ENSACAG00000003671	-	95	61.899	ENSSDUG00000001122	rad54b	81	61.899	Seriola_dumerili
ENSACAG00000003671	-	98	61.139	ENSSLDG00000013787	rad54b	91	58.756	Seriola_lalandi_dorsalis
ENSACAG00000003671	-	99	77.541	ENSSPUG00000016497	-	90	77.541	Sphenodon_punctatus
ENSACAG00000003671	-	98	60.533	ENSSPAG00000012800	rad54b	89	60.533	Stegastes_partitus
ENSACAG00000003671	-	99	71.339	ENSSSCG00000006101	-	99	71.339	Sus_scrofa
ENSACAG00000003671	-	98	76.071	ENSTGUG00000011880	-	87	76.071	Taeniopygia_guttata
ENSACAG00000003671	-	99	60.000	ENSTRUG00000010015	rad54b	84	60.000	Takifugu_rubripes
ENSACAG00000003671	-	99	66.750	ENSTTRG00000006312	-	88	66.750	Tursiops_truncatus
ENSACAG00000003671	-	99	71.843	ENSUMAG00000016401	-	87	71.843	Ursus_maritimus
ENSACAG00000003671	-	99	70.964	ENSVPAG00000003157	-	88	70.964	Vicugna_pacos
ENSACAG00000003671	-	98	60.076	ENSXETG00000025924	rad54b	99	60.025	Xenopus_tropicalis
ENSACAG00000003671	-	98	60.102	ENSXMAG00000013141	rad54b	91	60.102	Xiphophorus_maculatus