EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000003714 (Gene tree)
Gene ID: 100562897
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 37404 bases
Position: chrGL343302.1:1323368-1360771
Accession: 100562897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000020609	Rif1_N	PF12231.8	2.5e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000026491	RIF1-201	8685	XM_008117843	ENSACAP00000020609	2361 (aa)	XP_008116050	H9GUB1

Gene Model

Click here to download ENSACAG00000003714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000003714's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000003714	RIF1	91	54.795	ENSG00000080345	RIF1	97	65.857	Homo_sapiens
ENSACAG00000003714	RIF1	90	57.307	ENSAMEG00000008461	RIF1	84	57.307	Ailuropoda_melanoleuca
ENSACAG00000003714	RIF1	53	48.646	ENSAOCG00000017231	rif1	50	48.646	Amphiprion_ocellaris
ENSACAG00000003714	RIF1	53	53.659	ENSAPEG00000013228	rif1	61	53.659	Amphiprion_percula
ENSACAG00000003714	RIF1	68	46.754	ENSATEG00000022887	rif1	64	47.865	Anabas_testudineus
ENSACAG00000003714	RIF1	98	53.030	ENSAPLG00000007092	RIF1	99	52.234	Anas_platyrhynchos
ENSACAG00000003714	RIF1	90	58.112	ENSANAG00000024840	RIF1	84	58.112	Aotus_nancymaae
ENSACAG00000003714	RIF1	85	53.766	ENSBTAG00000021020	RIF1	83	57.971	Bos_taurus
ENSACAG00000003714	RIF1	89	58.112	ENSCJAG00000003138	RIF1	84	58.112	Callithrix_jacchus
ENSACAG00000003714	RIF1	90	57.514	ENSCAFG00000005670	RIF1	81	57.514	Canis_familiaris
ENSACAG00000003714	RIF1	91	55.376	ENSCAFG00020016401	RIF1	86	55.376	Canis_lupus_dingo
ENSACAG00000003714	RIF1	90	57.391	ENSCHIG00000020327	RIF1	84	57.391	Capra_hircus
ENSACAG00000003714	RIF1	96	58.333	ENSTSYG00000008861	RIF1	89	58.333	Carlito_syrichta
ENSACAG00000003714	RIF1	74	58.140	ENSCAPG00000008957	RIF1	92	58.140	Cavia_aperea
ENSACAG00000003714	RIF1	81	55.301	ENSCPOG00000037898	RIF1	60	60.180	Cavia_porcellus
ENSACAG00000003714	RIF1	90	57.143	ENSCCAG00000024760	RIF1	84	57.143	Cebus_capucinus
ENSACAG00000003714	RIF1	91	55.342	ENSCATG00000033353	RIF1	85	55.342	Cercocebus_atys
ENSACAG00000003714	RIF1	86	57.692	ENSCLAG00000001517	RIF1	83	57.692	Chinchilla_lanigera
ENSACAG00000003714	RIF1	91	55.616	ENSCSAG00000016089	RIF1	87	55.616	Chlorocebus_sabaeus
ENSACAG00000003714	RIF1	86	57.396	ENSCHOG00000007187	RIF1	80	57.396	Choloepus_hoffmanni
ENSACAG00000003714	RIF1	96	68.144	ENSCPBG00000025885	RIF1	99	68.135	Chrysemys_picta_bellii
ENSACAG00000003714	RIF1	86	62.109	ENSCANG00000028962	RIF1	84	62.109	Colobus_angolensis_palliatus
ENSACAG00000003714	RIF1	89	58.036	ENSCGRG00001024589	Rif1	85	57.864	Cricetulus_griseus_chok1gshd
ENSACAG00000003714	RIF1	88	58.036	ENSCGRG00000010713	Rif1	84	57.864	Cricetulus_griseus_crigri
ENSACAG00000003714	RIF1	63	53.933	ENSCSEG00000003945	rif1	64	53.933	Cynoglossus_semilaevis
ENSACAG00000003714	RIF1	56	48.173	ENSDARG00000062650	rif1	55	48.148	Danio_rerio
ENSACAG00000003714	RIF1	89	58.282	ENSDNOG00000011194	RIF1	80	58.282	Dasypus_novemcinctus
ENSACAG00000003714	RIF1	67	55.287	ENSETEG00000012421	RIF1	65	55.287	Echinops_telfairi
ENSACAG00000003714	RIF1	90	58.857	ENSEASG00005023434	RIF1	80	63.199	Equus_asinus_asinus
ENSACAG00000003714	RIF1	86	69.055	ENSECAG00000012679	RIF1	82	69.055	Equus_caballus
ENSACAG00000003714	RIF1	66	50.357	ENSELUG00000006826	rif1	56	50.000	Esox_lucius
ENSACAG00000003714	RIF1	70	50.856	ENSFALG00000013874	RIF1	99	49.528	Ficedula_albicollis
ENSACAG00000003714	RIF1	90	58.982	ENSFDAG00000006538	RIF1	84	58.982	Fukomys_damarensis
ENSACAG00000003714	RIF1	66	48.914	ENSFHEG00000013721	rif1	68	48.228	Fundulus_heteroclitus
ENSACAG00000003714	RIF1	57	47.184	ENSGMOG00000003517	rif1	84	47.097	Gadus_morhua
ENSACAG00000003714	RIF1	93	50.991	ENSGALG00000012484	RIF1	99	51.208	Gallus_gallus
ENSACAG00000003714	RIF1	71	48.720	ENSGAFG00000017196	rif1	73	51.368	Gambusia_affinis
ENSACAG00000003714	RIF1	61	54.274	ENSGACG00000008579	rif1	64	53.750	Gasterosteus_aculeatus
ENSACAG00000003714	RIF1	94	68.328	ENSGAGG00000012595	RIF1	99	68.328	Gopherus_agassizii
ENSACAG00000003714	RIF1	80	68.195	ENSGGOG00000040178	RIF1	80	68.195	Gorilla_gorilla
ENSACAG00000003714	RIF1	54	48.543	ENSHBUG00000007125	rif1	56	49.047	Haplochromis_burtoni
ENSACAG00000003714	RIF1	84	59.809	ENSHGLG00100009807	RIF1	84	59.809	Heterocephalus_glaber_male
ENSACAG00000003714	RIF1	66	48.019	ENSHCOG00000015943	rif1	60	48.019	Hippocampus_comes
ENSACAG00000003714	RIF1	52	51.397	ENSIPUG00000021703	rif1	52	50.974	Ictalurus_punctatus
ENSACAG00000003714	RIF1	89	58.997	ENSSTOG00000020712	RIF1	83	58.997	Ictidomys_tridecemlineatus
ENSACAG00000003714	RIF1	89	57.958	ENSJJAG00000023000	Rif1	85	57.958	Jaculus_jaculus
ENSACAG00000003714	RIF1	67	49.265	ENSLBEG00000023196	rif1	60	49.460	Labrus_bergylta
ENSACAG00000003714	RIF1	88	58.029	ENSLACG00000005425	RIF1	90	58.284	Latimeria_chalumnae
ENSACAG00000003714	RIF1	54	49.809	ENSLOCG00000002657	rif1	67	44.969	Lepisosteus_oculatus
ENSACAG00000003714	RIF1	89	58.434	ENSLAFG00000009796	RIF1	84	58.434	Loxodonta_africana
ENSACAG00000003714	RIF1	92	55.616	ENSMFAG00000032233	RIF1	87	55.616	Macaca_fascicularis
ENSACAG00000003714	RIF1	92	55.342	ENSMMUG00000008611	RIF1	87	55.342	Macaca_mulatta
ENSACAG00000003714	RIF1	91	55.616	ENSMNEG00000031616	RIF1	85	55.616	Macaca_nemestrina
ENSACAG00000003714	RIF1	91	55.342	ENSMLEG00000042945	RIF1	85	55.342	Mandrillus_leucophaeus
ENSACAG00000003714	RIF1	60	47.559	ENSMAMG00000001745	rif1	59	47.559	Mastacembelus_armatus
ENSACAG00000003714	RIF1	70	48.686	ENSMZEG00005020920	rif1	73	48.961	Maylandia_zebra
ENSACAG00000003714	RIF1	98	51.393	ENSMGAG00000012732	RIF1	99	51.582	Meleagris_gallopavo
ENSACAG00000003714	RIF1	90	57.429	ENSMICG00000046127	RIF1	84	57.429	Microcebus_murinus
ENSACAG00000003714	RIF1	92	51.351	ENSMOCG00000009381	Rif1	84	58.112	Microtus_ochrogaster
ENSACAG00000003714	RIF1	65	47.500	ENSMMOG00000006519	rif1	64	47.258	Mola_mola
ENSACAG00000003714	RIF1	89	61.442	ENSMODG00000003703	RIF1	86	62.069	Monodelphis_domestica
ENSACAG00000003714	RIF1	67	47.009	ENSMALG00000016759	rif1	73	46.770	Monopterus_albus
ENSACAG00000003714	RIF1	91	57.186	MGP_CAROLIEiJ_G0023555	Rif1	86	57.186	Mus_caroli
ENSACAG00000003714	RIF1	90	57.612	ENSMUSG00000036202	Rif1	85	57.612	Mus_musculus
ENSACAG00000003714	RIF1	91	58.383	MGP_PahariEiJ_G0025006	Rif1	85	58.383	Mus_pahari
ENSACAG00000003714	RIF1	90	57.784	MGP_SPRETEiJ_G0024476	Rif1	85	57.784	Mus_spretus
ENSACAG00000003714	RIF1	99	54.688	ENSMPUG00000000371	RIF1	84	55.707	Mustela_putorius_furo
ENSACAG00000003714	RIF1	82	53.511	ENSMLUG00000003376	RIF1	82	59.587	Myotis_lucifugus
ENSACAG00000003714	RIF1	91	59.587	ENSNGAG00000009268	Rif1	87	59.587	Nannospalax_galili
ENSACAG00000003714	RIF1	71	48.160	ENSNBRG00000014257	rif1	72	48.006	Neolamprologus_brichardi
ENSACAG00000003714	RIF1	93	50.188	ENSNLEG00000010955	RIF1	85	50.735	Nomascus_leucogenys
ENSACAG00000003714	RIF1	88	69.507	ENSMEUG00000007601	-	88	69.507	Notamacropus_eugenii
ENSACAG00000003714	RIF1	88	59.281	ENSODEG00000003950	RIF1	83	59.281	Octodon_degus
ENSACAG00000003714	RIF1	54	49.728	ENSONIG00000013657	rif1	67	49.261	Oreochromis_niloticus
ENSACAG00000003714	RIF1	74	81.250	ENSOANG00000006078	-	73	81.250	Ornithorhynchus_anatinus
ENSACAG00000003714	RIF1	96	49.643	ENSOCUG00000017435	RIF1	90	50.082	Oryctolagus_cuniculus
ENSACAG00000003714	RIF1	53	47.698	ENSORLG00020001302	rif1	54	47.857	Oryzias_latipes_hni
ENSACAG00000003714	RIF1	52	48.356	ENSORLG00015000009	rif1	53	48.095	Oryzias_latipes_hsok
ENSACAG00000003714	RIF1	64	47.932	ENSOMEG00000021513	rif1	68	47.578	Oryzias_melastigma
ENSACAG00000003714	RIF1	90	57.391	ENSOARG00000008930	RIF1	84	57.391	Ovis_aries
ENSACAG00000003714	RIF1	90	57.227	ENSPPAG00000023754	RIF1	84	57.227	Pan_paniscus
ENSACAG00000003714	RIF1	99	48.678	ENSPPRG00000003618	RIF1	83	56.447	Panthera_pardus
ENSACAG00000003714	RIF1	99	48.678	ENSPTIG00000020652	RIF1	83	56.447	Panthera_tigris_altaica
ENSACAG00000003714	RIF1	90	57.227	ENSPTRG00000012534	RIF1	84	57.227	Pan_troglodytes
ENSACAG00000003714	RIF1	91	55.616	ENSPANG00000008525	RIF1	85	55.616	Papio_anubis
ENSACAG00000003714	RIF1	52	50.161	ENSPKIG00000004267	rif1	54	50.199	Paramormyrops_kingsleyae
ENSACAG00000003714	RIF1	69	44.590	ENSPMGG00000016141	rif1	81	44.393	Periophthalmus_magnuspinnatus
ENSACAG00000003714	RIF1	90	58.407	ENSPEMG00000000446	Rif1	86	58.407	Peromyscus_maniculatus_bairdii
ENSACAG00000003714	RIF1	90	63.175	ENSPCIG00000009185	RIF1	86	63.175	Phascolarctos_cinereus
ENSACAG00000003714	RIF1	61	49.091	ENSPFOG00000000554	-	50	49.182	Poecilia_formosa
ENSACAG00000003714	RIF1	68	49.445	ENSPFOG00000017804	rif1	53	49.683	Poecilia_formosa
ENSACAG00000003714	RIF1	68	49.404	ENSPLAG00000017945	rif1	79	49.089	Poecilia_latipinna
ENSACAG00000003714	RIF1	64	50.558	ENSPREG00000018052	rif1	68	51.816	Poecilia_reticulata
ENSACAG00000003714	RIF1	91	55.342	ENSPPYG00000012846	RIF1	85	55.342	Pongo_abelii
ENSACAG00000003714	RIF1	58	64.186	ENSPCAG00000009032	RIF1	55	64.516	Procavia_capensis
ENSACAG00000003714	RIF1	90	57.714	ENSPCOG00000027888	RIF1	84	57.714	Propithecus_coquereli
ENSACAG00000003714	RIF1	85	68.980	ENSPVAG00000014276	RIF1	80	68.980	Pteropus_vampyrus
ENSACAG00000003714	RIF1	68	47.022	ENSPNYG00000012940	rif1	70	46.713	Pundamilia_nyererei
ENSACAG00000003714	RIF1	68	50.625	ENSPNAG00000016685	rif1	67	50.735	Pygocentrus_nattereri
ENSACAG00000003714	RIF1	90	58.084	ENSRNOG00000054901	Rif1	85	58.084	Rattus_norvegicus
ENSACAG00000003714	RIF1	91	55.342	ENSRBIG00000003704	RIF1	85	55.342	Rhinopithecus_bieti
ENSACAG00000003714	RIF1	91	55.068	ENSRROG00000028206	RIF1	85	55.068	Rhinopithecus_roxellana
ENSACAG00000003714	RIF1	87	59.341	ENSSBOG00000029530	RIF1	85	59.341	Saimiri_boliviensis_boliviensis
ENSACAG00000003714	RIF1	97	59.701	ENSSHAG00000018552	RIF1	93	59.701	Sarcophilus_harrisii
ENSACAG00000003714	RIF1	66	51.176	ENSSFOG00015021539	rif1	85	44.149	Scleropages_formosus
ENSACAG00000003714	RIF1	66	48.439	ENSSMAG00000011704	rif1	61	48.308	Scophthalmus_maximus
ENSACAG00000003714	RIF1	66	48.620	ENSSDUG00000015632	rif1	54	48.492	Seriola_dumerili
ENSACAG00000003714	RIF1	66	49.114	ENSSLDG00000019531	rif1	66	48.892	Seriola_lalandi_dorsalis
ENSACAG00000003714	RIF1	98	53.694	ENSSPUG00000003062	RIF1	99	53.946	Sphenodon_punctatus
ENSACAG00000003714	RIF1	53	55.102	ENSSPAG00000018359	rif1	77	55.102	Stegastes_partitus
ENSACAG00000003714	RIF1	93	57.429	ENSSSCG00000016395	RIF1	86	57.429	Sus_scrofa
ENSACAG00000003714	RIF1	67	48.835	ENSTRUG00000015808	rif1	70	48.835	Takifugu_rubripes
ENSACAG00000003714	RIF1	66	48.441	ENSTNIG00000011538	rif1	68	48.441	Tetraodon_nigroviridis
ENSACAG00000003714	RIF1	76	54.375	ENSTBEG00000016082	RIF1	68	54.375	Tupaia_belangeri
ENSACAG00000003714	RIF1	90	57.349	ENSTTRG00000011190	RIF1	84	57.349	Tursiops_truncatus
ENSACAG00000003714	RIF1	80	57.429	ENSUAMG00000026385	RIF1	81	57.429	Ursus_americanus
ENSACAG00000003714	RIF1	90	57.143	ENSUMAG00000000337	RIF1	84	57.143	Ursus_maritimus
ENSACAG00000003714	RIF1	91	55.906	ENSVPAG00000002162	RIF1	85	55.906	Vicugna_pacos
ENSACAG00000003714	RIF1	92	52.184	ENSVVUG00000011293	RIF1	87	52.184	Vulpes_vulpes
ENSACAG00000003714	RIF1	68	55.490	ENSXETG00000004530	rif1	85	55.490	Xenopus_tropicalis
ENSACAG00000003714	RIF1	62	48.649	ENSXMAG00000000506	rif1	67	47.297	Xiphophorus_maculatus