EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000003825 (Gene tree)
Gene ID: 100557970
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 26816 bases
Position: chrGL343286.1:600869-627684
Accession: 100557970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000003796	zf-CCCH	PF00642.24	8.7e-05	1	1
ENSACAP00000003796	TRM	PF02005.16	9e-142	1	1
ENSACAP00000003796	Met_10	PF02475.16	6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000003888	TRMT1-201	7240	XM_003225207	ENSACAP00000003796	618 (aa)	XP_003225255	H9G883

Gene Model

Click here to download ENSACAG00000003825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000003825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000003825	TRMT1	95	67.285	ENSG00000104907	TRMT1	100	75.916	Homo_sapiens
ENSACAG00000003825	TRMT1	97	65.677	ENSAMEG00000012598	TRMT1	89	65.677	Ailuropoda_melanoleuca
ENSACAG00000003825	TRMT1	94	58.549	ENSACIG00000018680	trmt1	89	58.549	Amphilophus_citrinellus
ENSACAG00000003825	TRMT1	94	67.474	ENSAOCG00000006781	trmt1	86	67.474	Amphiprion_ocellaris
ENSACAG00000003825	TRMT1	94	67.474	ENSAPEG00000007712	trmt1	86	67.474	Amphiprion_percula
ENSACAG00000003825	TRMT1	94	67.993	ENSATEG00000001872	trmt1	85	67.993	Anabas_testudineus
ENSACAG00000003825	TRMT1	97	64.628	ENSANAG00000023016	TRMT1	93	66.781	Aotus_nancymaae
ENSACAG00000003825	TRMT1	94	64.879	ENSACLG00000010073	trmt1	94	64.879	Astatotilapia_calliptera
ENSACAG00000003825	TRMT1	96	64.725	ENSAMXG00000012026	trmt1	90	64.725	Astyanax_mexicanus
ENSACAG00000003825	TRMT1	97	66.393	ENSBTAG00000019325	TRMT1	87	66.393	Bos_taurus
ENSACAG00000003825	TRMT1	84	41.165	WBGene00006613	trm-1	94	41.165	Caenorhabditis_elegans
ENSACAG00000003825	TRMT1	99	63.592	ENSCJAG00000004566	TRMT1	94	63.592	Callithrix_jacchus
ENSACAG00000003825	TRMT1	99	65.097	ENSCAFG00000017070	TRMT1	92	66.948	Canis_familiaris
ENSACAG00000003825	TRMT1	99	64.553	ENSCAFG00020005397	TRMT1	91	66.497	Canis_lupus_dingo
ENSACAG00000003825	TRMT1	96	67.780	ENSCHIG00000013569	TRMT1	89	67.780	Capra_hircus
ENSACAG00000003825	TRMT1	98	61.912	ENSTSYG00000003207	TRMT1	94	61.912	Carlito_syrichta
ENSACAG00000003825	TRMT1	86	64.850	ENSCAPG00000003355	TRMT1	94	64.850	Cavia_aperea
ENSACAG00000003825	TRMT1	93	66.954	ENSCPOG00000011754	TRMT1	88	66.954	Cavia_porcellus
ENSACAG00000003825	TRMT1	95	65.599	ENSCCAG00000022263	TRMT1	93	66.265	Cebus_capucinus
ENSACAG00000003825	TRMT1	94	67.687	ENSCATG00000039850	TRMT1	89	67.687	Cercocebus_atys
ENSACAG00000003825	TRMT1	77	56.133	ENSCATG00000038220	-	85	56.133	Cercocebus_atys
ENSACAG00000003825	TRMT1	97	65.506	ENSCLAG00000015295	TRMT1	93	62.791	Chinchilla_lanigera
ENSACAG00000003825	TRMT1	78	70.270	ENSCSAG00000006500	TRMT1	91	70.270	Chlorocebus_sabaeus
ENSACAG00000003825	TRMT1	95	75.639	ENSCPBG00000023866	TRMT1	88	76.570	Chrysemys_picta_bellii
ENSACAG00000003825	TRMT1	88	46.293	ENSCING00000002884	-	97	46.293	Ciona_intestinalis
ENSACAG00000003825	TRMT1	86	48.790	ENSCSAVG00000010927	-	100	47.706	Ciona_savignyi
ENSACAG00000003825	TRMT1	95	52.373	ENSCANG00000040631	TRMT1	89	52.373	Colobus_angolensis_palliatus
ENSACAG00000003825	TRMT1	94	51.104	ENSCANG00000031650	-	91	51.952	Colobus_angolensis_palliatus
ENSACAG00000003825	TRMT1	96	65.066	ENSCGRG00001022594	Trmt1	92	65.397	Cricetulus_griseus_chok1gshd
ENSACAG00000003825	TRMT1	96	65.066	ENSCGRG00000017732	Trmt1	91	65.397	Cricetulus_griseus_crigri
ENSACAG00000003825	TRMT1	98	66.172	ENSCSEG00000001643	trmt1	88	67.587	Cynoglossus_semilaevis
ENSACAG00000003825	TRMT1	94	66.954	ENSCVAG00000011886	trmt1	87	66.954	Cyprinodon_variegatus
ENSACAG00000003825	TRMT1	99	63.607	ENSDARG00000010978	trmt1	91	63.607	Danio_rerio
ENSACAG00000003825	TRMT1	85	45.336	ENSDNOG00000048240	-	91	45.336	Dasypus_novemcinctus
ENSACAG00000003825	TRMT1	93	64.888	ENSDORG00000014298	Trmt1	88	64.888	Dipodomys_ordii
ENSACAG00000003825	TRMT1	91	44.834	FBgn0032430	CG6388	93	44.834	Drosophila_melanogaster
ENSACAG00000003825	TRMT1	87	53.731	ENSEBUG00000003449	trmt1	78	53.889	Eptatretus_burgeri
ENSACAG00000003825	TRMT1	94	67.347	ENSEASG00005004050	TRMT1	91	67.347	Equus_asinus_asinus
ENSACAG00000003825	TRMT1	94	67.347	ENSECAG00000016149	TRMT1	91	67.347	Equus_caballus
ENSACAG00000003825	TRMT1	54	71.713	ENSEEUG00000014102	-	84	71.713	Erinaceus_europaeus
ENSACAG00000003825	TRMT1	93	66.034	ENSELUG00000021659	trmt1	86	66.034	Esox_lucius
ENSACAG00000003825	TRMT1	92	68.531	ENSFCAG00000000483	TRMT1	87	68.531	Felis_catus
ENSACAG00000003825	TRMT1	97	64.007	ENSFDAG00000007386	TRMT1	93	64.007	Fukomys_damarensis
ENSACAG00000003825	TRMT1	83	68.411	ENSFHEG00000012865	trmt1	86	68.217	Fundulus_heteroclitus
ENSACAG00000003825	TRMT1	92	61.404	ENSGMOG00000006564	trmt1	98	61.930	Gadus_morhua
ENSACAG00000003825	TRMT1	93	68.761	ENSGAFG00000011862	trmt1	89	68.935	Gambusia_affinis
ENSACAG00000003825	TRMT1	92	66.025	ENSGACG00000000227	trmt1	92	66.025	Gasterosteus_aculeatus
ENSACAG00000003825	TRMT1	95	74.957	ENSGAGG00000016432	TRMT1	87	74.957	Gopherus_agassizii
ENSACAG00000003825	TRMT1	95	67.285	ENSGGOG00000014007	TRMT1	90	67.285	Gorilla_gorilla
ENSACAG00000003825	TRMT1	90	59.025	ENSHBUG00000008821	trmt1	92	59.025	Haplochromis_burtoni
ENSACAG00000003825	TRMT1	93	67.591	ENSHGLG00000015972	TRMT1	88	67.591	Heterocephalus_glaber_female
ENSACAG00000003825	TRMT1	93	62.457	ENSHGLG00100018112	TRMT1	88	62.457	Heterocephalus_glaber_male
ENSACAG00000003825	TRMT1	93	65.331	ENSHCOG00000009447	trmt1	88	65.331	Hippocampus_comes
ENSACAG00000003825	TRMT1	97	62.890	ENSIPUG00000002899	trmt1	88	63.218	Ictalurus_punctatus
ENSACAG00000003825	TRMT1	94	66.781	ENSSTOG00000012531	TRMT1	89	66.781	Ictidomys_tridecemlineatus
ENSACAG00000003825	TRMT1	95	65.494	ENSJJAG00000017154	Trmt1	91	65.494	Jaculus_jaculus
ENSACAG00000003825	TRMT1	94	67.820	ENSKMAG00000011809	trmt1	96	67.474	Kryptolebias_marmoratus
ENSACAG00000003825	TRMT1	97	65.512	ENSLBEG00000012703	trmt1	89	65.512	Labrus_bergylta
ENSACAG00000003825	TRMT1	93	59.028	ENSLACG00000014585	TRMT1	95	58.834	Latimeria_chalumnae
ENSACAG00000003825	TRMT1	92	61.806	ENSLOCG00000006479	trmt1	97	61.806	Lepisosteus_oculatus
ENSACAG00000003825	TRMT1	97	65.728	ENSLAFG00000014072	TRMT1	92	65.728	Loxodonta_africana
ENSACAG00000003825	TRMT1	94	67.517	ENSMFAG00000033143	TRMT1	89	67.517	Macaca_fascicularis
ENSACAG00000003825	TRMT1	94	63.714	ENSMMUG00000001167	TRMT1	89	63.714	Macaca_mulatta
ENSACAG00000003825	TRMT1	94	67.517	ENSMNEG00000037867	TRMT1	89	67.517	Macaca_nemestrina
ENSACAG00000003825	TRMT1	95	66.946	ENSMLEG00000016142	TRMT1	90	66.946	Mandrillus_leucophaeus
ENSACAG00000003825	TRMT1	93	67.882	ENSMAMG00000004357	trmt1	86	67.882	Mastacembelus_armatus
ENSACAG00000003825	TRMT1	94	65.225	ENSMZEG00005014510	trmt1	87	65.225	Maylandia_zebra
ENSACAG00000003825	TRMT1	96	65.017	ENSMAUG00000011134	Trmt1	91	65.017	Mesocricetus_auratus
ENSACAG00000003825	TRMT1	93	68.458	ENSMICG00000000793	TRMT1	87	68.458	Microcebus_murinus
ENSACAG00000003825	TRMT1	96	65.667	ENSMOCG00000015895	Trmt1	91	66.000	Microtus_ochrogaster
ENSACAG00000003825	TRMT1	99	64.039	ENSMMOG00000011097	trmt1	98	64.039	Mola_mola
ENSACAG00000003825	TRMT1	93	68.586	ENSMODG00000011619	TRMT1	93	68.586	Monodelphis_domestica
ENSACAG00000003825	TRMT1	96	66.338	MGP_CAROLIEiJ_G0031304	Trmt1	96	64.729	Mus_caroli
ENSACAG00000003825	TRMT1	96	65.846	ENSMUSG00000001909	Trmt1	99	62.172	Mus_musculus
ENSACAG00000003825	TRMT1	96	66.338	MGP_SPRETEiJ_G0032422	Trmt1	96	64.341	Mus_spretus
ENSACAG00000003825	TRMT1	98	65.738	ENSMPUG00000004210	TRMT1	86	65.738	Mustela_putorius_furo
ENSACAG00000003825	TRMT1	94	67.802	ENSMLUG00000012809	TRMT1	87	67.802	Myotis_lucifugus
ENSACAG00000003825	TRMT1	92	68.357	ENSNGAG00000022486	Trmt1	86	68.357	Nannospalax_galili
ENSACAG00000003825	TRMT1	81	68.824	ENSNBRG00000024376	trmt1	86	68.824	Neolamprologus_brichardi
ENSACAG00000003825	TRMT1	76	69.637	ENSNLEG00000013019	-	87	69.637	Nomascus_leucogenys
ENSACAG00000003825	TRMT1	96	66.891	ENSMEUG00000013756	TRMT1	99	66.891	Notamacropus_eugenii
ENSACAG00000003825	TRMT1	75	79.245	ENSOPRG00000009471	-	72	79.245	Ochotona_princeps
ENSACAG00000003825	TRMT1	92	68.651	ENSODEG00000010323	TRMT1	87	68.651	Octodon_degus
ENSACAG00000003825	TRMT1	94	67.820	ENSONIG00000000400	trmt1	93	67.354	Oreochromis_niloticus
ENSACAG00000003825	TRMT1	78	70.782	ENSOCUG00000021934	TRMT1	91	71.222	Oryctolagus_cuniculus
ENSACAG00000003825	TRMT1	94	63.744	ENSORLG00000020074	trmt1	92	63.744	Oryzias_latipes
ENSACAG00000003825	TRMT1	99	64.058	ENSORLG00020007561	trmt1	94	64.058	Oryzias_latipes_hni
ENSACAG00000003825	TRMT1	97	65.397	ENSORLG00015006547	trmt1	91	65.397	Oryzias_latipes_hsok
ENSACAG00000003825	TRMT1	92	68.531	ENSOMEG00000019343	trmt1	86	68.531	Oryzias_melastigma
ENSACAG00000003825	TRMT1	95	66.102	ENSOGAG00000025576	TRMT1	92	66.836	Otolemur_garnettii
ENSACAG00000003825	TRMT1	96	55.574	ENSOARG00000009397	TRMT1	83	55.408	Ovis_aries
ENSACAG00000003825	TRMT1	92	60.345	ENSPPRG00000012117	TRMT1	87	62.478	Panthera_pardus
ENSACAG00000003825	TRMT1	69	71.080	ENSPTIG00000008833	TRMT1	82	71.080	Panthera_tigris_altaica
ENSACAG00000003825	TRMT1	90	50.177	ENSPTRG00000050421	-	89	50.177	Pan_troglodytes
ENSACAG00000003825	TRMT1	95	67.285	ENSPTRG00000010557	TRMT1	90	67.285	Pan_troglodytes
ENSACAG00000003825	TRMT1	94	67.517	ENSPANG00000009247	TRMT1	89	67.517	Papio_anubis
ENSACAG00000003825	TRMT1	75	56.867	ENSPANG00000034058	-	80	56.867	Papio_anubis
ENSACAG00000003825	TRMT1	93	68.063	ENSPKIG00000005309	trmt1	84	68.063	Paramormyrops_kingsleyae
ENSACAG00000003825	TRMT1	96	60.469	ENSPSIG00000008762	TRMT1	85	60.469	Pelodiscus_sinensis
ENSACAG00000003825	TRMT1	95	66.099	ENSPMGG00000019764	trmt1	93	66.099	Periophthalmus_magnuspinnatus
ENSACAG00000003825	TRMT1	96	65.289	ENSPEMG00000016247	Trmt1	91	65.455	Peromyscus_maniculatus_bairdii
ENSACAG00000003825	TRMT1	93	61.780	ENSPMAG00000004329	trmt1	90	61.780	Petromyzon_marinus
ENSACAG00000003825	TRMT1	93	69.391	ENSPCIG00000019273	TRMT1	89	69.391	Phascolarctos_cinereus
ENSACAG00000003825	TRMT1	93	68.935	ENSPFOG00000008527	trmt1	88	68.935	Poecilia_formosa
ENSACAG00000003825	TRMT1	93	67.888	ENSPLAG00000018788	trmt1	89	69.790	Poecilia_latipinna
ENSACAG00000003825	TRMT1	93	68.586	ENSPMEG00000013120	trmt1	88	68.586	Poecilia_mexicana
ENSACAG00000003825	TRMT1	94	68.512	ENSPREG00000000211	trmt1	86	68.685	Poecilia_reticulata
ENSACAG00000003825	TRMT1	93	68.158	ENSPPYG00000009622	TRMT1	88	68.158	Pongo_abelii
ENSACAG00000003825	TRMT1	96	62.207	ENSPCAG00000003698	TRMT1	91	62.207	Procavia_capensis
ENSACAG00000003825	TRMT1	96	66.555	ENSPCOG00000008653	TRMT1	90	66.555	Propithecus_coquereli
ENSACAG00000003825	TRMT1	93	67.642	ENSPVAG00000015076	TRMT1	88	67.642	Pteropus_vampyrus
ENSACAG00000003825	TRMT1	94	63.495	ENSPNYG00000013960	trmt1	93	63.495	Pundamilia_nyererei
ENSACAG00000003825	TRMT1	91	69.247	ENSPNAG00000024859	trmt1	96	69.247	Pygocentrus_nattereri
ENSACAG00000003825	TRMT1	95	66.225	ENSRNOG00000002914	Trmt1	94	66.225	Rattus_norvegicus
ENSACAG00000003825	TRMT1	95	67.233	ENSRBIG00000038324	TRMT1	89	67.233	Rhinopithecus_bieti
ENSACAG00000003825	TRMT1	95	49.831	ENSRBIG00000037505	-	92	50.676	Rhinopithecus_bieti
ENSACAG00000003825	TRMT1	95	49.155	ENSRROG00000031847	-	91	50.000	Rhinopithecus_roxellana
ENSACAG00000003825	TRMT1	95	67.402	ENSRROG00000028599	TRMT1	89	67.402	Rhinopithecus_roxellana
ENSACAG00000003825	TRMT1	82	37.175	YDR120C	-	92	37.175	Saccharomyces_cerevisiae
ENSACAG00000003825	TRMT1	97	64.238	ENSSBOG00000028861	TRMT1	93	65.749	Saimiri_boliviensis_boliviensis
ENSACAG00000003825	TRMT1	92	69.596	ENSSHAG00000014381	TRMT1	96	67.851	Sarcophilus_harrisii
ENSACAG00000003825	TRMT1	93	67.014	ENSSFOG00015004139	trmt1	85	67.014	Scleropages_formosus
ENSACAG00000003825	TRMT1	93	68.566	ENSSMAG00000021136	trmt1	86	68.566	Scophthalmus_maximus
ENSACAG00000003825	TRMT1	94	67.414	ENSSDUG00000012740	trmt1	85	67.414	Seriola_dumerili
ENSACAG00000003825	TRMT1	94	67.414	ENSSLDG00000005971	trmt1	85	67.414	Seriola_lalandi_dorsalis
ENSACAG00000003825	TRMT1	84	68.130	ENSSARG00000005138	TRMT1	92	68.130	Sorex_araneus
ENSACAG00000003825	TRMT1	94	57.653	ENSSPUG00000001084	TRMT1	92	57.993	Sphenodon_punctatus
ENSACAG00000003825	TRMT1	94	65.571	ENSSPAG00000007153	trmt1	95	65.571	Stegastes_partitus
ENSACAG00000003825	TRMT1	96	67.446	ENSSSCG00000013744	TRMT1	93	67.446	Sus_scrofa
ENSACAG00000003825	TRMT1	94	61.421	ENSTRUG00000010700	trmt1	88	61.591	Takifugu_rubripes
ENSACAG00000003825	TRMT1	92	67.193	ENSTNIG00000018808	trmt1	98	67.193	Tetraodon_nigroviridis
ENSACAG00000003825	TRMT1	96	63.471	ENSTTRG00000006379	TRMT1	92	63.158	Tursiops_truncatus
ENSACAG00000003825	TRMT1	97	65.842	ENSUAMG00000022911	TRMT1	94	65.455	Ursus_americanus
ENSACAG00000003825	TRMT1	97	65.512	ENSUMAG00000006027	TRMT1	94	65.512	Ursus_maritimus
ENSACAG00000003825	TRMT1	99	65.584	ENSVVUG00000024177	TRMT1	92	65.584	Vulpes_vulpes
ENSACAG00000003825	TRMT1	75	72.138	ENSXETG00000033863	TRMT1	92	72.138	Xenopus_tropicalis
ENSACAG00000003825	TRMT1	93	68.237	ENSXCOG00000015733	trmt1	88	68.412	Xiphophorus_couchianus
ENSACAG00000003825	TRMT1	93	67.535	ENSXMAG00000013823	trmt1	99	67.708	Xiphophorus_maculatus