EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000003994 (Gene tree)
Gene ID: 100567401
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 23083 bases
Position: chr6:78561336-78584418
Accession: 100567401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000003976	ResIII	PF04851.15	1.1e-06	1	1
ENSACAP00000003976	DEAD	PF00270.29	2.1e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000004068	DDX42-201	7731	XM_003222648	ENSACAP00000003976	933 (aa)	XP_003222696	G1KCH8

Gene Model

Click here to download ENSACAG00000003994's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000003994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000003994	DDX42	59	40.813	ENSACAG00000001437	DDX46	63	40.989

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000003994	DDX42	99	84.316	ENSG00000198231	DDX42	100	91.346	Homo_sapiens
ENSACAG00000003994	DDX42	90	75.385	ENSAPOG00000017675	ddx42	99	72.350	Acanthochromis_polyacanthus
ENSACAG00000003994	DDX42	99	84.233	ENSAMEG00000003200	DDX42	100	84.060	Ailuropoda_melanoleuca
ENSACAG00000003994	DDX42	83	71.247	ENSACIG00000007376	ddx42	99	72.462	Amphilophus_citrinellus
ENSACAG00000003994	DDX42	99	71.597	ENSAOCG00000003520	ddx42	99	72.169	Amphiprion_ocellaris
ENSACAG00000003994	DDX42	99	71.613	ENSAPEG00000000984	ddx42	99	72.630	Amphiprion_percula
ENSACAG00000003994	DDX42	99	71.872	ENSATEG00000022920	ddx42	99	72.601	Anabas_testudineus
ENSACAG00000003994	DDX42	99	85.381	ENSAPLG00000010544	DDX42	100	86.126	Anas_platyrhynchos
ENSACAG00000003994	DDX42	99	84.591	ENSANAG00000035693	DDX42	99	89.016	Aotus_nancymaae
ENSACAG00000003994	DDX42	90	75.976	ENSACLG00000025113	ddx42	99	73.448	Astatotilapia_calliptera
ENSACAG00000003994	DDX42	77	81.044	ENSAMXG00000011435	ddx42	99	70.242	Astyanax_mexicanus
ENSACAG00000003994	DDX42	99	83.369	ENSBTAG00000021058	DDX42	98	88.160	Bos_taurus
ENSACAG00000003994	DDX42	68	51.376	WBGene00008119	C46F11.4	79	52.851	Caenorhabditis_elegans
ENSACAG00000003994	DDX42	99	84.378	ENSCJAG00000019649	DDX42	99	91.958	Callithrix_jacchus
ENSACAG00000003994	DDX42	99	84.428	ENSCAFG00000012818	DDX42	100	84.149	Canis_familiaris
ENSACAG00000003994	DDX42	99	84.534	ENSCAFG00020026631	DDX42	100	84.255	Canis_lupus_dingo
ENSACAG00000003994	DDX42	99	84.000	ENSCHIG00000014431	DDX42	100	84.318	Capra_hircus
ENSACAG00000003994	DDX42	99	84.021	ENSTSYG00000001380	DDX42	100	83.953	Carlito_syrichta
ENSACAG00000003994	DDX42	72	68.778	ENSCAPG00000013621	DDX42	94	68.778	Cavia_aperea
ENSACAG00000003994	DDX42	99	84.525	ENSCPOG00000005633	DDX42	100	83.991	Cavia_porcellus
ENSACAG00000003994	DDX42	99	80.085	ENSCCAG00000020612	DDX42	97	89.112	Cebus_capucinus
ENSACAG00000003994	DDX42	99	84.845	ENSCATG00000030490	DDX42	100	84.509	Cercocebus_atys
ENSACAG00000003994	DDX42	99	84.926	ENSCLAG00000003497	DDX42	100	84.485	Chinchilla_lanigera
ENSACAG00000003994	DDX42	99	80.628	ENSCSAG00000003914	DDX42	100	80.336	Chlorocebus_sabaeus
ENSACAG00000003994	DDX42	78	91.964	ENSCHOG00000006241	DDX42	79	91.964	Choloepus_hoffmanni
ENSACAG00000003994	DDX42	99	85.174	ENSCPBG00000026682	DDX42	100	85.356	Chrysemys_picta_bellii
ENSACAG00000003994	DDX42	99	84.845	ENSCANG00000034663	DDX42	99	89.209	Colobus_angolensis_palliatus
ENSACAG00000003994	DDX42	99	85.000	ENSCGRG00001009775	Ddx42	100	84.468	Cricetulus_griseus_chok1gshd
ENSACAG00000003994	DDX42	99	85.000	ENSCGRG00000011718	Ddx42	100	84.468	Cricetulus_griseus_crigri
ENSACAG00000003994	DDX42	99	71.259	ENSCSEG00000021574	ddx42	99	72.240	Cynoglossus_semilaevis
ENSACAG00000003994	DDX42	99	70.117	ENSCVAG00000011404	ddx42	99	71.291	Cyprinodon_variegatus
ENSACAG00000003994	DDX42	99	70.940	ENSDARG00000037928	ddx42	99	71.067	Danio_rerio
ENSACAG00000003994	DDX42	99	79.830	ENSDNOG00000007961	DDX42	100	80.021	Dasypus_novemcinctus
ENSACAG00000003994	DDX42	99	78.450	ENSDORG00000004199	Ddx42	100	78.108	Dipodomys_ordii
ENSACAG00000003994	DDX42	65	60.450	FBgn0036104	CG6418	93	54.521	Drosophila_melanogaster
ENSACAG00000003994	DDX42	80	73.245	ENSEBUG00000001155	ddx42	91	73.245	Eptatretus_burgeri
ENSACAG00000003994	DDX42	99	83.953	ENSEASG00005013089	DDX42	99	89.109	Equus_asinus_asinus
ENSACAG00000003994	DDX42	99	83.847	ENSECAG00000022684	DDX42	100	84.730	Equus_caballus
ENSACAG00000003994	DDX42	58	94.595	ENSEEUG00000009144	DDX42	73	94.595	Erinaceus_europaeus
ENSACAG00000003994	DDX42	99	70.308	ENSELUG00000020593	ddx42	99	71.338	Esox_lucius
ENSACAG00000003994	DDX42	99	84.322	ENSFCAG00000003499	DDX42	100	84.820	Felis_catus
ENSACAG00000003994	DDX42	97	82.751	ENSFALG00000004675	DDX42	80	82.314	Ficedula_albicollis
ENSACAG00000003994	DDX42	99	83.775	ENSFDAG00000020516	DDX42	100	83.881	Fukomys_damarensis
ENSACAG00000003994	DDX42	99	70.343	ENSFHEG00000023290	ddx42	99	71.444	Fundulus_heteroclitus
ENSACAG00000003994	DDX42	75	77.151	ENSGMOG00000004595	ddx42	88	77.151	Gadus_morhua
ENSACAG00000003994	DDX42	99	83.979	ENSGALG00000000581	DDX42	100	84.503	Gallus_gallus
ENSACAG00000003994	DDX42	90	74.941	ENSGAFG00000011846	ddx42	96	73.602	Gambusia_affinis
ENSACAG00000003994	DDX42	99	67.983	ENSGACG00000009782	ddx42	99	68.206	Gasterosteus_aculeatus
ENSACAG00000003994	DDX42	99	85.236	ENSGAGG00000024411	DDX42	99	85.104	Gopherus_agassizii
ENSACAG00000003994	DDX42	99	85.059	ENSGGOG00000006779	DDX42	97	89.096	Gorilla_gorilla
ENSACAG00000003994	DDX42	90	76.095	ENSHBUG00000008705	ddx42	99	73.555	Haplochromis_burtoni
ENSACAG00000003994	DDX42	99	80.298	ENSHGLG00000010024	DDX42	100	79.957	Heterocephalus_glaber_female
ENSACAG00000003994	DDX42	94	63.341	ENSHGLG00100007138	-	96	63.075	Heterocephalus_glaber_male
ENSACAG00000003994	DDX42	99	84.004	ENSHGLG00100004479	-	100	83.070	Heterocephalus_glaber_male
ENSACAG00000003994	DDX42	83	77.778	ENSHCOG00000003357	ddx42	99	69.687	Hippocampus_comes
ENSACAG00000003994	DDX42	80	79.101	ENSIPUG00000013327	ddx42	100	70.043	Ictalurus_punctatus
ENSACAG00000003994	DDX42	99	84.836	ENSSTOG00000008922	DDX42	100	84.395	Ictidomys_tridecemlineatus
ENSACAG00000003994	DDX42	99	84.681	ENSJJAG00000011727	Ddx42	100	84.452	Jaculus_jaculus
ENSACAG00000003994	DDX42	99	68.783	ENSKMAG00000009914	ddx42	99	72.611	Kryptolebias_marmoratus
ENSACAG00000003994	DDX42	81	75.260	ENSLBEG00000004687	ddx42	99	66.702	Labrus_bergylta
ENSACAG00000003994	DDX42	99	76.407	ENSLACG00000013476	DDX42	97	77.238	Latimeria_chalumnae
ENSACAG00000003994	DDX42	99	74.731	ENSLOCG00000011764	ddx42	99	74.596	Lepisosteus_oculatus
ENSACAG00000003994	DDX42	99	84.492	ENSLAFG00000003249	DDX42	100	84.345	Loxodonta_africana
ENSACAG00000003994	DDX42	99	84.845	ENSMFAG00000031356	DDX42	100	84.509	Macaca_fascicularis
ENSACAG00000003994	DDX42	99	84.566	ENSMMUG00000016762	DDX42	96	88.682	Macaca_mulatta
ENSACAG00000003994	DDX42	99	84.845	ENSMNEG00000038250	DDX42	100	84.509	Macaca_nemestrina
ENSACAG00000003994	DDX42	99	84.105	ENSMLEG00000043080	DDX42	100	83.827	Mandrillus_leucophaeus
ENSACAG00000003994	DDX42	90	76.010	ENSMAMG00000021888	ddx42	98	72.458	Mastacembelus_armatus
ENSACAG00000003994	DDX42	90	75.976	ENSMZEG00005023103	ddx42	99	73.448	Maylandia_zebra
ENSACAG00000003994	DDX42	99	84.034	ENSMGAG00000001822	DDX42	100	84.349	Meleagris_gallopavo
ENSACAG00000003994	DDX42	76	88.873	ENSMAUG00000020774	-	94	89.444	Mesocricetus_auratus
ENSACAG00000003994	DDX42	99	84.328	ENSMICG00000009952	DDX42	100	83.991	Microcebus_murinus
ENSACAG00000003994	DDX42	99	84.255	ENSMOCG00000015504	Ddx42	100	83.936	Microtus_ochrogaster
ENSACAG00000003994	DDX42	89	71.871	ENSMMOG00000016963	ddx42	87	71.019	Mola_mola
ENSACAG00000003994	DDX42	50	93.576	ENSMODG00000009917	-	98	93.576	Monodelphis_domestica
ENSACAG00000003994	DDX42	99	72.329	ENSMALG00000007800	ddx42	99	72.834	Monopterus_albus
ENSACAG00000003994	DDX42	99	84.681	MGP_CAROLIEiJ_G0017314	Ddx42	100	84.149	Mus_caroli
ENSACAG00000003994	DDX42	99	84.574	ENSMUSG00000020705	Ddx42	100	84.043	Mus_musculus
ENSACAG00000003994	DDX42	72	93.759	MGP_PahariEiJ_G0018444	-	96	93.501	Mus_pahari
ENSACAG00000003994	DDX42	99	84.681	MGP_SPRETEiJ_G0018158	Ddx42	100	84.149	Mus_spretus
ENSACAG00000003994	DDX42	99	83.263	ENSMPUG00000014921	DDX42	100	83.861	Mustela_putorius_furo
ENSACAG00000003994	DDX42	99	82.568	ENSMLUG00000011645	DDX42	100	83.072	Myotis_lucifugus
ENSACAG00000003994	DDX42	99	85.059	ENSNGAG00000021897	Ddx42	100	84.829	Nannospalax_galili
ENSACAG00000003994	DDX42	90	74.526	ENSNBRG00000004466	ddx42	99	72.240	Neolamprologus_brichardi
ENSACAG00000003994	DDX42	99	84.936	ENSNLEG00000004248	DDX42	99	88.953	Nomascus_leucogenys
ENSACAG00000003994	DDX42	74	78.657	ENSMEUG00000013227	-	85	78.657	Notamacropus_eugenii
ENSACAG00000003994	DDX42	99	82.508	ENSOPRG00000014960	DDX42	100	82.618	Ochotona_princeps
ENSACAG00000003994	DDX42	99	81.423	ENSODEG00000007810	DDX42	100	81.084	Octodon_degus
ENSACAG00000003994	DDX42	90	75.887	ENSONIG00000000734	ddx42	99	73.476	Oreochromis_niloticus
ENSACAG00000003994	DDX42	58	89.981	ENSOANG00000000265	DDX42	100	89.981	Ornithorhynchus_anatinus
ENSACAG00000003994	DDX42	95	85.969	ENSOCUG00000004304	DDX42	88	84.768	Oryctolagus_cuniculus
ENSACAG00000003994	DDX42	99	71.751	ENSORLG00000002395	ddx42	100	71.720	Oryzias_latipes
ENSACAG00000003994	DDX42	99	71.966	ENSORLG00020011621	ddx42	100	73.019	Oryzias_latipes_hni
ENSACAG00000003994	DDX42	99	71.966	ENSORLG00015004487	ddx42	100	73.019	Oryzias_latipes_hsok
ENSACAG00000003994	DDX42	99	73.118	ENSOMEG00000020093	ddx42	100	73.611	Oryzias_melastigma
ENSACAG00000003994	DDX42	99	84.161	ENSOGAG00000006872	DDX42	100	83.881	Otolemur_garnettii
ENSACAG00000003994	DDX42	99	82.236	ENSOARG00000013540	DDX42	100	83.473	Ovis_aries
ENSACAG00000003994	DDX42	99	84.952	ENSPPAG00000007496	DDX42	97	88.873	Pan_paniscus
ENSACAG00000003994	DDX42	99	84.322	ENSPPRG00000002740	DDX42	100	84.820	Panthera_pardus
ENSACAG00000003994	DDX42	99	84.362	ENSPTIG00000009932	DDX42	100	84.681	Panthera_tigris_altaica
ENSACAG00000003994	DDX42	99	84.952	ENSPTRG00000009523	DDX42	97	88.873	Pan_troglodytes
ENSACAG00000003994	DDX42	99	84.739	ENSPANG00000020990	DDX42	100	84.402	Papio_anubis
ENSACAG00000003994	DDX42	99	70.525	ENSPKIG00000002901	ddx42	99	71.183	Paramormyrops_kingsleyae
ENSACAG00000003994	DDX42	86	90.423	ENSPSIG00000010289	DDX42	98	90.347	Pelodiscus_sinensis
ENSACAG00000003994	DDX42	99	68.138	ENSPMGG00000009323	ddx42	100	69.239	Periophthalmus_magnuspinnatus
ENSACAG00000003994	DDX42	99	85.122	ENSPEMG00000006755	Ddx42	100	84.591	Peromyscus_maniculatus_bairdii
ENSACAG00000003994	DDX42	80	72.047	ENSPMAG00000005580	ddx42	100	72.441	Petromyzon_marinus
ENSACAG00000003994	DDX42	100	82.866	ENSPCIG00000009093	DDX42	100	83.193	Phascolarctos_cinereus
ENSACAG00000003994	DDX42	99	70.126	ENSPFOG00000014104	ddx42	99	72.034	Poecilia_formosa
ENSACAG00000003994	DDX42	99	70.021	ENSPLAG00000010522	ddx42	99	71.822	Poecilia_latipinna
ENSACAG00000003994	DDX42	99	70.032	ENSPMEG00000010744	ddx42	99	71.324	Poecilia_mexicana
ENSACAG00000003994	DDX42	99	69.447	ENSPREG00000009926	ddx42	99	70.490	Poecilia_reticulata
ENSACAG00000003994	DDX42	99	81.933	ENSPPYG00000008531	DDX42	100	81.646	Pongo_abelii
ENSACAG00000003994	DDX42	91	77.586	ENSPCAG00000002474	DDX42	100	78.941	Procavia_capensis
ENSACAG00000003994	DDX42	99	75.264	ENSPCOG00000001559	DDX42	98	81.029	Propithecus_coquereli
ENSACAG00000003994	DDX42	99	81.084	ENSPVAG00000000160	DDX42	100	80.867	Pteropus_vampyrus
ENSACAG00000003994	DDX42	74	74.286	ENSPNYG00000013954	ddx42	97	71.320	Pundamilia_nyererei
ENSACAG00000003994	DDX42	77	80.628	ENSPNAG00000017352	ddx42	99	69.843	Pygocentrus_nattereri
ENSACAG00000003994	DDX42	99	84.468	ENSRNOG00000009474	Ddx42	100	84.043	Rattus_norvegicus
ENSACAG00000003994	DDX42	99	84.739	ENSRBIG00000004781	DDX42	99	89.065	Rhinopithecus_bieti
ENSACAG00000003994	DDX42	99	84.739	ENSRROG00000029794	DDX42	100	84.402	Rhinopithecus_roxellana
ENSACAG00000003994	DDX42	99	84.485	ENSSBOG00000029624	DDX42	97	89.240	Saimiri_boliviensis_boliviensis
ENSACAG00000003994	DDX42	70	56.148	ENSSHAG00000007919	-	99	56.036	Sarcophilus_harrisii
ENSACAG00000003994	DDX42	99	83.648	ENSSHAG00000012896	-	100	83.403	Sarcophilus_harrisii
ENSACAG00000003994	DDX42	77	83.889	ENSSFOG00015014064	ddx42	81	82.470	Scleropages_formosus
ENSACAG00000003994	DDX42	99	71.536	ENSSMAG00000009077	ddx42	99	72.099	Scophthalmus_maximus
ENSACAG00000003994	DDX42	99	71.550	ENSSDUG00000022221	ddx42	99	72.281	Seriola_dumerili
ENSACAG00000003994	DDX42	99	71.383	ENSSLDG00000018483	ddx42	99	71.798	Seriola_lalandi_dorsalis
ENSACAG00000003994	DDX42	99	83.351	ENSSARG00000009847	DDX42	100	83.652	Sorex_araneus
ENSACAG00000003994	DDX42	99	88.556	ENSSPUG00000018806	DDX42	100	88.235	Sphenodon_punctatus
ENSACAG00000003994	DDX42	99	71.125	ENSSPAG00000013055	ddx42	99	72.766	Stegastes_partitus
ENSACAG00000003994	DDX42	85	81.227	ENSSSCG00000017289	DDX42	97	82.432	Sus_scrofa
ENSACAG00000003994	DDX42	99	84.105	ENSTGUG00000001931	DDX42	100	84.322	Taeniopygia_guttata
ENSACAG00000003994	DDX42	99	69.979	ENSTRUG00000010711	ddx42	99	80.889	Takifugu_rubripes
ENSACAG00000003994	DDX42	81	87.335	ENSTBEG00000010159	DDX42	99	87.335	Tupaia_belangeri
ENSACAG00000003994	DDX42	99	83.704	ENSTTRG00000006962	DDX42	100	84.640	Tursiops_truncatus
ENSACAG00000003994	DDX42	99	84.266	ENSUAMG00000007321	DDX42	100	84.093	Ursus_americanus
ENSACAG00000003994	DDX42	99	84.199	ENSUMAG00000017438	DDX42	100	84.026	Ursus_maritimus
ENSACAG00000003994	DDX42	99	73.729	ENSVPAG00000009633	DDX42	100	74.867	Vicugna_pacos
ENSACAG00000003994	DDX42	99	84.362	ENSVVUG00000006095	DDX42	100	84.468	Vulpes_vulpes
ENSACAG00000003994	DDX42	99	77.092	ENSXETG00000003245	ddx42	100	76.275	Xenopus_tropicalis
ENSACAG00000003994	DDX42	83	71.537	ENSXCOG00000017560	ddx42	97	72.449	Xiphophorus_couchianus
ENSACAG00000003994	DDX42	99	71.996	ENSXMAG00000008138	ddx42	99	72.874	Xiphophorus_maculatus