EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000003995 (Gene tree)
Gene ID: 100563640
Gene Symbol: -
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 6526 bases
Position: chrGL344047.1:103835-110360
Accession: 100563640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000003918	RRM_1	PF00076.22	7.7e-16	1	1
ENSACAP00000018607	RRM_1	PF00076.22	1.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000025570	-	2529	XM_008123866	ENSACAP00000018607	294 (aa)	-	H9GR60
ENSACAT00000004010	-	2499	-	ENSACAP00000003918	284 (aa)	-	H9G8D8

Gene Model

Click here to download ENSACAG00000003995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000003995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000003995	-	59	43.452	ENSACAG00000004205	-	64	43.452

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000003995	-	99	75.874	ENSG00000180098	TRNAU1AP	99	75.874	Homo_sapiens
ENSACAG00000003995	-	95	50.853	ENSAPOG00000007148	TRNAU1AP	96	49.653	Acanthochromis_polyacanthus
ENSACAG00000003995	-	99	75.175	ENSAMEG00000011367	TRNAU1AP	99	75.175	Ailuropoda_melanoleuca
ENSACAG00000003995	-	87	65.909	ENSACIG00000004161	trnau1apa	91	65.909	Amphilophus_citrinellus
ENSACAG00000003995	-	95	50.000	ENSAOCG00000008056	trnau1apa	94	50.000	Amphiprion_ocellaris
ENSACAG00000003995	-	95	50.000	ENSAPEG00000008868	trnau1apa	94	50.000	Amphiprion_percula
ENSACAG00000003995	-	95	49.329	ENSATEG00000012140	trnau1apa	93	48.311	Anabas_testudineus
ENSACAG00000003995	-	94	78.229	ENSAPLG00000002606	TRNAU1AP	99	78.229	Anas_platyrhynchos
ENSACAG00000003995	-	99	75.874	ENSANAG00000018976	TRNAU1AP	99	75.874	Aotus_nancymaae
ENSACAG00000003995	-	98	51.178	ENSACLG00000018515	trnau1apa	94	51.186	Astatotilapia_calliptera
ENSACAG00000003995	-	89	64.444	ENSAMXG00000029240	-	95	66.292	Astyanax_mexicanus
ENSACAG00000003995	-	96	46.392	ENSAMXG00000013750	trnau1apa	90	44.803	Astyanax_mexicanus
ENSACAG00000003995	-	99	75.524	ENSBTAG00000010393	TRNAU1AP	99	75.524	Bos_taurus
ENSACAG00000003995	-	99	75.874	ENSCJAG00000009717	TRNAU1AP	93	85.897	Callithrix_jacchus
ENSACAG00000003995	-	99	76.224	ENSCAFG00000011735	TRNAU1AP	99	76.224	Canis_familiaris
ENSACAG00000003995	-	99	76.224	ENSCAFG00020023584	TRNAU1AP	99	76.224	Canis_lupus_dingo
ENSACAG00000003995	-	99	75.524	ENSCHIG00000023215	TRNAU1AP	99	75.524	Capra_hircus
ENSACAG00000003995	-	99	75.874	ENSTSYG00000003506	TRNAU1AP	93	85.897	Carlito_syrichta
ENSACAG00000003995	-	99	76.573	ENSCPOG00000001925	TRNAU1AP	99	76.573	Cavia_porcellus
ENSACAG00000003995	-	99	75.874	ENSCCAG00000037506	TRNAU1AP	93	85.897	Cebus_capucinus
ENSACAG00000003995	-	99	75.524	ENSCATG00000044617	TRNAU1AP	93	85.897	Cercocebus_atys
ENSACAG00000003995	-	99	76.923	ENSCLAG00000008223	TRNAU1AP	99	76.923	Chinchilla_lanigera
ENSACAG00000003995	-	99	75.524	ENSCSAG00000001014	TRNAU1AP	99	75.524	Chlorocebus_sabaeus
ENSACAG00000003995	-	95	79.562	ENSCPBG00000000121	TRNAU1AP	99	79.562	Chrysemys_picta_bellii
ENSACAG00000003995	-	59	44.571	ENSCSAVG00000011781	-	87	45.783	Ciona_savignyi
ENSACAG00000003995	-	99	63.986	ENSCANG00000041949	TRNAU1AP	97	74.419	Colobus_angolensis_palliatus
ENSACAG00000003995	-	99	75.874	ENSCGRG00001004713	Trnau1ap	99	75.874	Cricetulus_griseus_chok1gshd
ENSACAG00000003995	-	99	75.874	ENSCGRG00000014532	Trnau1ap	99	75.874	Cricetulus_griseus_crigri
ENSACAG00000003995	-	97	47.000	ENSCSEG00000006663	trnau1apa	94	46.000	Cynoglossus_semilaevis
ENSACAG00000003995	-	95	48.123	ENSCVAG00000018069	trnau1apa	94	48.905	Cyprinodon_variegatus
ENSACAG00000003995	-	96	43.151	ENSDARG00000101323	trnau1apa	89	42.857	Danio_rerio
ENSACAG00000003995	-	99	76.224	ENSDNOG00000033009	TRNAU1AP	99	76.224	Dasypus_novemcinctus
ENSACAG00000003995	-	64	59.459	ENSDNOG00000047959	-	93	60.000	Dasypus_novemcinctus
ENSACAG00000003995	-	97	71.583	ENSDORG00000006349	Trnau1ap	99	74.459	Dipodomys_ordii
ENSACAG00000003995	-	96	32.733	FBgn0031607	CG15440	51	42.222	Drosophila_melanogaster
ENSACAG00000003995	-	85	70.612	ENSETEG00000012594	TRNAU1AP	99	70.612	Echinops_telfairi
ENSACAG00000003995	-	99	75.874	ENSEASG00005010062	TRNAU1AP	93	89.333	Equus_asinus_asinus
ENSACAG00000003995	-	99	75.874	ENSECAG00000012980	TRNAU1AP	93	89.333	Equus_caballus
ENSACAG00000003995	-	89	72.727	ENSELUG00000022790	-	94	73.750	Esox_lucius
ENSACAG00000003995	-	95	51.379	ENSELUG00000017686	trnau1apa	94	51.986	Esox_lucius
ENSACAG00000003995	-	99	75.874	ENSFCAG00000013401	TRNAU1AP	99	75.874	Felis_catus
ENSACAG00000003995	-	95	79.197	ENSFALG00000001371	TRNAU1AP	99	79.197	Ficedula_albicollis
ENSACAG00000003995	-	99	76.224	ENSFDAG00000018599	TRNAU1AP	99	76.224	Fukomys_damarensis
ENSACAG00000003995	-	78	48.790	ENSFHEG00000018232	trnau1apa	86	46.718	Fundulus_heteroclitus
ENSACAG00000003995	-	94	45.390	ENSGMOG00000016508	trnau1apa	92	45.000	Gadus_morhua
ENSACAG00000003995	-	64	36.634	ENSGALG00000012721	C2H6orf52	76	41.872	Gallus_gallus
ENSACAG00000003995	-	99	76.923	ENSGALG00000001310	-	99	76.923	Gallus_gallus
ENSACAG00000003995	-	77	46.218	ENSGAFG00000004928	trnau1apa	94	46.185	Gambusia_affinis
ENSACAG00000003995	-	97	50.345	ENSGACG00000001443	trnau1apa	94	50.345	Gasterosteus_aculeatus
ENSACAG00000003995	-	95	79.927	ENSGAGG00000004940	TRNAU1AP	99	79.927	Gopherus_agassizii
ENSACAG00000003995	-	99	75.874	ENSGGOG00000003511	TRNAU1AP	93	85.897	Gorilla_gorilla
ENSACAG00000003995	-	98	50.331	ENSHBUG00000002510	trnau1apa	94	50.333	Haplochromis_burtoni
ENSACAG00000003995	-	99	76.224	ENSHGLG00000010380	TRNAU1AP	99	76.224	Heterocephalus_glaber_female
ENSACAG00000003995	-	94	76.753	ENSHGLG00100012699	TRNAU1AP	95	76.753	Heterocephalus_glaber_male
ENSACAG00000003995	-	98	48.161	ENSHCOG00000014770	trnau1apa	96	45.183	Hippocampus_comes
ENSACAG00000003995	-	99	75.874	ENSSTOG00000000079	TRNAU1AP	99	75.874	Ictidomys_tridecemlineatus
ENSACAG00000003995	-	99	76.573	ENSJJAG00000010128	Trnau1ap	99	76.573	Jaculus_jaculus
ENSACAG00000003995	-	94	50.173	ENSKMAG00000001230	trnau1apa	92	47.751	Kryptolebias_marmoratus
ENSACAG00000003995	-	94	49.828	ENSLBEG00000011683	trnau1apa	92	48.986	Labrus_bergylta
ENSACAG00000003995	-	99	61.404	ENSLACG00000005541	TRNAU1AP	99	61.404	Latimeria_chalumnae
ENSACAG00000003995	-	97	62.057	ENSLOCG00000004041	trnau1apa	97	61.702	Lepisosteus_oculatus
ENSACAG00000003995	-	99	75.874	ENSLAFG00000007628	TRNAU1AP	99	75.874	Loxodonta_africana
ENSACAG00000003995	-	99	75.524	ENSMFAG00000043751	TRNAU1AP	93	85.897	Macaca_fascicularis
ENSACAG00000003995	-	99	75.524	ENSMMUG00000006561	TRNAU1AP	99	75.524	Macaca_mulatta
ENSACAG00000003995	-	99	75.524	ENSMNEG00000044201	TRNAU1AP	93	85.897	Macaca_nemestrina
ENSACAG00000003995	-	99	75.524	ENSMLEG00000015649	TRNAU1AP	93	85.897	Mandrillus_leucophaeus
ENSACAG00000003995	-	95	49.832	ENSMAMG00000001247	trnau1apa	92	49.635	Mastacembelus_armatus
ENSACAG00000003995	-	98	51.178	ENSMZEG00005017722	trnau1apa	94	51.186	Maylandia_zebra
ENSACAG00000003995	-	97	76.978	ENSMGAG00000002105	TRNAU1AP	99	76.978	Meleagris_gallopavo
ENSACAG00000003995	-	99	76.224	ENSMICG00000008386	TRNAU1AP	93	85.897	Microcebus_murinus
ENSACAG00000003995	-	99	76.224	ENSMOCG00000011189	Trnau1ap	99	76.224	Microtus_ochrogaster
ENSACAG00000003995	-	94	47.101	ENSMMOG00000012107	trnau1apa	91	47.080	Mola_mola
ENSACAG00000003995	-	99	75.524	ENSMODG00000010927	TRNAU1AP	99	75.524	Monodelphis_domestica
ENSACAG00000003995	-	95	49.315	ENSMALG00000016778	trnau1apa	93	48.464	Monopterus_albus
ENSACAG00000003995	-	99	75.175	MGP_CAROLIEiJ_G0026563	Trnau1ap	99	87.500	Mus_caroli
ENSACAG00000003995	-	99	75.175	ENSMUSG00000028898	Trnau1ap	99	87.500	Mus_musculus
ENSACAG00000003995	-	99	75.524	MGP_PahariEiJ_G0028896	Trnau1ap	99	87.500	Mus_pahari
ENSACAG00000003995	-	99	75.524	MGP_SPRETEiJ_G0027544	Trnau1ap	99	87.500	Mus_spretus
ENSACAG00000003995	-	99	75.874	ENSMPUG00000015511	TRNAU1AP	99	75.874	Mustela_putorius_furo
ENSACAG00000003995	-	99	76.224	ENSMLUG00000012586	TRNAU1AP	99	76.224	Myotis_lucifugus
ENSACAG00000003995	-	99	76.923	ENSNGAG00000015881	Trnau1ap	99	76.923	Nannospalax_galili
ENSACAG00000003995	-	96	46.853	ENSNBRG00000001758	trnau1apa	92	46.853	Neolamprologus_brichardi
ENSACAG00000003995	-	99	75.874	ENSNLEG00000009822	TRNAU1AP	93	85.897	Nomascus_leucogenys
ENSACAG00000003995	-	97	75.540	ENSMEUG00000006117	TRNAU1AP	99	75.540	Notamacropus_eugenii
ENSACAG00000003995	-	70	81.651	ENSOPRG00000007084	-	69	81.651	Ochotona_princeps
ENSACAG00000003995	-	99	76.923	ENSODEG00000002970	TRNAU1AP	99	76.923	Octodon_degus
ENSACAG00000003995	-	80	48.594	ENSONIG00000004715	trnau1apa	95	49.593	Oreochromis_niloticus
ENSACAG00000003995	-	97	70.863	ENSOANG00000005325	-	97	70.714	Ornithorhynchus_anatinus
ENSACAG00000003995	-	99	57.143	ENSOCUG00000002353	-	99	55.932	Oryctolagus_cuniculus
ENSACAG00000003995	-	88	57.312	ENSOCUG00000006834	-	98	56.126	Oryctolagus_cuniculus
ENSACAG00000003995	-	99	74.825	ENSOCUG00000011704	-	99	74.825	Oryctolagus_cuniculus
ENSACAG00000003995	-	97	48.805	ENSORLG00000010428	trnau1apa	94	47.440	Oryzias_latipes
ENSACAG00000003995	-	97	48.805	ENSORLG00020000926	trnau1ap	94	47.440	Oryzias_latipes_hni
ENSACAG00000003995	-	97	48.805	ENSORLG00015009858	trnau1ap	94	47.440	Oryzias_latipes_hsok
ENSACAG00000003995	-	97	49.492	ENSOMEG00000007873	trnau1apa	94	46.416	Oryzias_melastigma
ENSACAG00000003995	-	99	76.140	ENSOGAG00000002274	TRNAU1AP	99	76.140	Otolemur_garnettii
ENSACAG00000003995	-	99	75.524	ENSOARG00000002843	TRNAU1AP	99	75.524	Ovis_aries
ENSACAG00000003995	-	99	75.874	ENSPPAG00000033927	TRNAU1AP	93	85.897	Pan_paniscus
ENSACAG00000003995	-	99	75.874	ENSPPRG00000004416	TRNAU1AP	99	75.874	Panthera_pardus
ENSACAG00000003995	-	99	75.874	ENSPTIG00000016677	TRNAU1AP	99	75.874	Panthera_tigris_altaica
ENSACAG00000003995	-	91	61.509	ENSPTRG00000000434	-	97	59.410	Pan_troglodytes
ENSACAG00000003995	-	99	75.524	ENSPANG00000016019	TRNAU1AP	93	85.897	Papio_anubis
ENSACAG00000003995	-	87	77.273	ENSPKIG00000022205	-	92	77.273	Paramormyrops_kingsleyae
ENSACAG00000003995	-	95	51.228	ENSPKIG00000015511	trnau1apa	92	49.826	Paramormyrops_kingsleyae
ENSACAG00000003995	-	95	79.562	ENSPSIG00000006864	TRNAU1AP	99	79.562	Pelodiscus_sinensis
ENSACAG00000003995	-	94	48.897	ENSPMGG00000023893	trnau1apa	90	47.601	Periophthalmus_magnuspinnatus
ENSACAG00000003995	-	99	75.524	ENSPEMG00000007877	Trnau1ap	99	75.524	Peromyscus_maniculatus_bairdii
ENSACAG00000003995	-	75	53.917	ENSPMAG00000005934	trnau1apa	96	52.074	Petromyzon_marinus
ENSACAG00000003995	-	62	48.404	ENSPMAG00000000592	trnau1apa	99	48.404	Petromyzon_marinus
ENSACAG00000003995	-	94	46.875	ENSPFOG00000008100	trnau1apa	92	47.552	Poecilia_formosa
ENSACAG00000003995	-	92	46.786	ENSPLAG00000010236	trnau1apa	93	47.482	Poecilia_latipinna
ENSACAG00000003995	-	95	47.826	ENSPMEG00000016387	trnau1apa	91	46.996	Poecilia_mexicana
ENSACAG00000003995	-	87	64.286	ENSPREG00000019821	trnau1apa	86	64.286	Poecilia_reticulata
ENSACAG00000003995	-	89	63.118	ENSPPYG00000001639	-	99	63.118	Pongo_abelii
ENSACAG00000003995	-	99	76.224	ENSPCOG00000027712	-	99	76.224	Propithecus_coquereli
ENSACAG00000003995	-	97	64.727	ENSPCOG00000023470	-	98	64.727	Propithecus_coquereli
ENSACAG00000003995	-	99	75.874	ENSPVAG00000017214	TRNAU1AP	99	75.874	Pteropus_vampyrus
ENSACAG00000003995	-	97	51.376	ENSPNYG00000010130	trnau1apa	97	48.425	Pundamilia_nyererei
ENSACAG00000003995	-	96	46.075	ENSPNAG00000024905	trnau1apa	91	43.617	Pygocentrus_nattereri
ENSACAG00000003995	-	94	69.004	ENSRNOG00000055344	Trnau1ap	92	69.004	Rattus_norvegicus
ENSACAG00000003995	-	99	75.874	ENSRBIG00000029083	TRNAU1AP	93	85.897	Rhinopithecus_bieti
ENSACAG00000003995	-	99	75.874	ENSRROG00000029128	TRNAU1AP	93	85.897	Rhinopithecus_roxellana
ENSACAG00000003995	-	99	75.874	ENSSBOG00000021299	TRNAU1AP	93	85.897	Saimiri_boliviensis_boliviensis
ENSACAG00000003995	-	99	74.825	ENSSHAG00000008108	TRNAU1AP	99	74.825	Sarcophilus_harrisii
ENSACAG00000003995	-	97	47.841	ENSSMAG00000020851	trnau1apa	95	47.826	Scophthalmus_maximus
ENSACAG00000003995	-	95	49.658	ENSSDUG00000011734	trnau1apa	93	47.458	Seriola_dumerili
ENSACAG00000003995	-	97	41.455	ENSSLDG00000012101	trnau1apa	93	43.273	Seriola_lalandi_dorsalis
ENSACAG00000003995	-	97	76.259	ENSSARG00000007536	TRNAU1AP	99	76.259	Sorex_araneus
ENSACAG00000003995	-	99	73.427	ENSSPUG00000010400	-	99	73.427	Sphenodon_punctatus
ENSACAG00000003995	-	61	71.512	ENSSPUG00000010415	-	98	71.512	Sphenodon_punctatus
ENSACAG00000003995	-	95	50.690	ENSSPAG00000005029	trnau1apa	93	50.345	Stegastes_partitus
ENSACAG00000003995	-	99	75.874	ENSSSCG00000030284	TRNAU1AP	99	75.874	Sus_scrofa
ENSACAG00000003995	-	64	43.548	ENSTGUG00000005908	-	95	43.548	Taeniopygia_guttata
ENSACAG00000003995	-	97	79.496	ENSTGUG00000000735	-	99	79.496	Taeniopygia_guttata
ENSACAG00000003995	-	94	49.653	ENSTRUG00000003352	trnau1apa	92	46.503	Takifugu_rubripes
ENSACAG00000003995	-	94	45.017	ENSTNIG00000006129	trnau1apa	92	45.329	Tetraodon_nigroviridis
ENSACAG00000003995	-	85	66.531	ENSTBEG00000008049	-	99	66.531	Tupaia_belangeri
ENSACAG00000003995	-	99	76.224	ENSTTRG00000001854	TRNAU1AP	99	76.224	Tursiops_truncatus
ENSACAG00000003995	-	95	76.642	ENSUAMG00000008789	TRNAU1AP	99	76.642	Ursus_americanus
ENSACAG00000003995	-	99	75.874	ENSUMAG00000011068	TRNAU1AP	99	75.874	Ursus_maritimus
ENSACAG00000003995	-	99	65.862	ENSVPAG00000006778	TRNAU1AP	99	65.862	Vicugna_pacos
ENSACAG00000003995	-	97	77.338	ENSVVUG00000012518	TRNAU1AP	90	77.338	Vulpes_vulpes
ENSACAG00000003995	-	94	46.735	ENSXMAG00000017361	trnau1apa	92	47.902	Xiphophorus_maculatus