EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000004013 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 136932 bases
Position: chrGL343263.1:41409-178340
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000004055	Fox-1_C	PF12414.8	7.9e-43	1	1
ENSACAP00000004055	RRM_1	PF00076.22	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000004149	RBFOX1-201	6011	-	ENSACAP00000004055	397 (aa)	-	H9G8L2

Gene Model

Click here to download ENSACAG00000004013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000004013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000004013	RBFOX1	98	64.373	ENSACAG00000016535	RBFOX2	82	64.373
ENSACAG00000004013	RBFOX1	75	59.677	ENSACAG00000011931	-	97	53.943
ENSACAG00000004013	RBFOX1	88	67.227	ENSACAG00000016093	RBFOX3	91	68.627

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000004013	RBFOX1	100	86.717	ENSG00000078328	RBFOX1	95	91.620	Homo_sapiens
ENSACAG00000004013	RBFOX1	98	74.634	ENSAPOG00000003197	rbfox1	99	73.494	Acanthochromis_polyacanthus
ENSACAG00000004013	RBFOX1	54	87.558	ENSAMEG00000008605	RBFOX1	87	87.558	Ailuropoda_melanoleuca
ENSACAG00000004013	RBFOX1	68	61.204	ENSACIG00000005478	rbfox1	78	57.522	Amphilophus_citrinellus
ENSACAG00000004013	RBFOX1	73	67.419	ENSAOCG00000008283	rbfox1	96	67.419	Amphiprion_ocellaris
ENSACAG00000004013	RBFOX1	95	67.016	ENSAPEG00000010636	rbfox1	100	66.927	Amphiprion_percula
ENSACAG00000004013	RBFOX1	73	66.667	ENSATEG00000007513	rbfox1	96	66.667	Anabas_testudineus
ENSACAG00000004013	RBFOX1	99	88.945	ENSAPLG00000013263	RBFOX1	99	88.945	Anas_platyrhynchos
ENSACAG00000004013	RBFOX1	99	85.390	ENSANAG00000029527	RBFOX1	99	85.390	Aotus_nancymaae
ENSACAG00000004013	RBFOX1	60	79.498	ENSAMXG00000002431	rbfox1	71	76.772	Astyanax_mexicanus
ENSACAG00000004013	RBFOX1	99	84.635	ENSBTAG00000007210	RBFOX1	99	84.635	Bos_taurus
ENSACAG00000004013	RBFOX1	98	88.010	ENSCJAG00000017351	RBFOX1	93	88.010	Callithrix_jacchus
ENSACAG00000004013	RBFOX1	98	86.005	ENSCAFG00000019082	RBFOX1	93	86.005	Canis_familiaris
ENSACAG00000004013	RBFOX1	68	84.502	ENSCAFG00020024881	RBFOX1	75	84.502	Canis_lupus_dingo
ENSACAG00000004013	RBFOX1	99	84.635	ENSCHIG00000023549	RBFOX1	99	84.635	Capra_hircus
ENSACAG00000004013	RBFOX1	98	85.969	ENSTSYG00000005334	RBFOX1	100	85.969	Carlito_syrichta
ENSACAG00000004013	RBFOX1	98	87.212	ENSCAPG00000017669	RBFOX1	100	87.212	Cavia_aperea
ENSACAG00000004013	RBFOX1	100	85.965	ENSCPOG00000011314	RBFOX1	99	86.990	Cavia_porcellus
ENSACAG00000004013	RBFOX1	98	86.005	ENSCCAG00000023031	RBFOX1	97	84.949	Cebus_capucinus
ENSACAG00000004013	RBFOX1	98	86.005	ENSCATG00000033816	RBFOX1	97	84.949	Cercocebus_atys
ENSACAG00000004013	RBFOX1	100	86.216	ENSCLAG00000012761	RBFOX1	99	86.216	Chinchilla_lanigera
ENSACAG00000004013	RBFOX1	85	84.320	ENSCSAG00000008739	RBFOX1	89	84.320	Chlorocebus_sabaeus
ENSACAG00000004013	RBFOX1	98	65.903	ENSCHOG00000012843	RBFOX1	93	65.903	Choloepus_hoffmanni
ENSACAG00000004013	RBFOX1	99	88.665	ENSCPBG00000026626	RBFOX1	99	86.717	Chrysemys_picta_bellii
ENSACAG00000004013	RBFOX1	98	86.005	ENSCANG00000033125	RBFOX1	97	84.949	Colobus_angolensis_palliatus
ENSACAG00000004013	RBFOX1	100	86.967	ENSCGRG00001013729	Rbfox1	99	86.967	Cricetulus_griseus_chok1gshd
ENSACAG00000004013	RBFOX1	100	86.967	ENSCGRG00000003272	Rbfox1	99	86.967	Cricetulus_griseus_crigri
ENSACAG00000004013	RBFOX1	95	69.250	ENSCSEG00000008840	rbfox1	100	69.250	Cynoglossus_semilaevis
ENSACAG00000004013	RBFOX1	98	80.153	ENSDARG00000014746	rbfox1	100	83.902	Danio_rerio
ENSACAG00000004013	RBFOX1	98	88.010	ENSDNOG00000043612	RBFOX1	94	88.010	Dasypus_novemcinctus
ENSACAG00000004013	RBFOX1	99	85.139	ENSDORG00000010024	Rbfox1	98	85.139	Dipodomys_ordii
ENSACAG00000004013	RBFOX1	98	69.720	ENSETEG00000003771	RBFOX1	93	69.720	Echinops_telfairi
ENSACAG00000004013	RBFOX1	98	88.010	ENSEASG00005011599	RBFOX1	99	85.390	Equus_asinus_asinus
ENSACAG00000004013	RBFOX1	98	86.005	ENSECAG00000012667	RBFOX1	91	85.789	Equus_caballus
ENSACAG00000004013	RBFOX1	82	68.605	ENSELUG00000013096	rbfox1	97	68.605	Esox_lucius
ENSACAG00000004013	RBFOX1	98	87.755	ENSFCAG00000025322	RBFOX1	89	87.755	Felis_catus
ENSACAG00000004013	RBFOX1	83	87.087	ENSFALG00000004027	RBFOX1	99	87.087	Ficedula_albicollis
ENSACAG00000004013	RBFOX1	100	86.466	ENSFDAG00000007388	RBFOX1	99	86.466	Fukomys_damarensis
ENSACAG00000004013	RBFOX1	98	87.023	ENSGALG00000034325	RBFOX1	93	87.023	Gallus_gallus
ENSACAG00000004013	RBFOX1	98	87.277	ENSGAGG00000023681	RBFOX1	100	89.211	Gopherus_agassizii
ENSACAG00000004013	RBFOX1	98	86.005	ENSGGOG00000016871	-	97	84.949	Gorilla_gorilla
ENSACAG00000004013	RBFOX1	100	86.216	ENSHGLG00000016944	RBFOX1	99	86.216	Heterocephalus_glaber_female
ENSACAG00000004013	RBFOX1	100	86.216	ENSHGLG00100003272	RBFOX1	99	86.216	Heterocephalus_glaber_male
ENSACAG00000004013	RBFOX1	85	67.714	ENSHCOG00000016419	rbfox1	91	67.614	Hippocampus_comes
ENSACAG00000004013	RBFOX1	95	81.053	ENSIPUG00000015215	rbfox1	100	81.053	Ictalurus_punctatus
ENSACAG00000004013	RBFOX1	100	86.216	ENSSTOG00000000322	RBFOX1	99	86.735	Ictidomys_tridecemlineatus
ENSACAG00000004013	RBFOX1	100	84.461	ENSJJAG00000002575	Rbfox1	99	84.461	Jaculus_jaculus
ENSACAG00000004013	RBFOX1	99	70.416	ENSLBEG00000014659	rbfox1	97	72.222	Labrus_bergylta
ENSACAG00000004013	RBFOX1	98	86.260	ENSLOCG00000006675	rbfox1	98	86.260	Lepisosteus_oculatus
ENSACAG00000004013	RBFOX1	78	88.103	ENSLAFG00000011480	RBFOX1	100	88.103	Loxodonta_africana
ENSACAG00000004013	RBFOX1	98	86.260	ENSMFAG00000036447	RBFOX1	97	85.204	Macaca_fascicularis
ENSACAG00000004013	RBFOX1	97	88.114	ENSMMUG00000003458	RBFOX1	97	88.114	Macaca_mulatta
ENSACAG00000004013	RBFOX1	98	86.260	ENSMNEG00000032034	RBFOX1	93	86.260	Macaca_nemestrina
ENSACAG00000004013	RBFOX1	98	86.005	ENSMLEG00000015382	RBFOX1	97	84.949	Mandrillus_leucophaeus
ENSACAG00000004013	RBFOX1	95	72.152	ENSMAMG00000003142	rbfox1	100	72.152	Mastacembelus_armatus
ENSACAG00000004013	RBFOX1	71	85.211	ENSMGAG00000008606	RBFOX1	95	84.946	Meleagris_gallopavo
ENSACAG00000004013	RBFOX1	96	51.958	ENSMAUG00000020570	Rbfox1	96	50.649	Mesocricetus_auratus
ENSACAG00000004013	RBFOX1	98	84.949	ENSMICG00000034286	RBFOX1	97	84.949	Microcebus_murinus
ENSACAG00000004013	RBFOX1	100	86.466	ENSMOCG00000020932	Rbfox1	100	87.597	Microtus_ochrogaster
ENSACAG00000004013	RBFOX1	85	69.298	ENSMMOG00000009716	rbfox1	86	69.006	Mola_mola
ENSACAG00000004013	RBFOX1	81	85.404	ENSMODG00000005826	RBFOX1	90	85.404	Monodelphis_domestica
ENSACAG00000004013	RBFOX1	98	74.752	ENSMALG00000003337	rbfox1	99	73.594	Monopterus_albus
ENSACAG00000004013	RBFOX1	100	86.717	MGP_CAROLIEiJ_G0020427	Rbfox1	99	86.717	Mus_caroli
ENSACAG00000004013	RBFOX1	100	86.466	ENSMUSG00000008658	Rbfox1	99	90.909	Mus_musculus
ENSACAG00000004013	RBFOX1	100	86.717	MGP_PahariEiJ_G0016135	Rbfox1	99	86.717	Mus_pahari
ENSACAG00000004013	RBFOX1	100	86.216	MGP_SPRETEiJ_G0021321	Rbfox1	99	86.216	Mus_spretus
ENSACAG00000004013	RBFOX1	84	84.731	ENSMPUG00000014822	RBFOX1	84	84.731	Mustela_putorius_furo
ENSACAG00000004013	RBFOX1	78	88.710	ENSMLUG00000015896	RBFOX1	100	88.710	Myotis_lucifugus
ENSACAG00000004013	RBFOX1	98	87.980	ENSNGAG00000023276	Rbfox1	100	87.980	Nannospalax_galili
ENSACAG00000004013	RBFOX1	98	60.964	ENSNBRG00000011084	rbfox1	94	60.964	Neolamprologus_brichardi
ENSACAG00000004013	RBFOX1	98	85.751	ENSNLEG00000010017	-	97	84.694	Nomascus_leucogenys
ENSACAG00000004013	RBFOX1	98	70.153	ENSMEUG00000012525	RBFOX1	93	70.153	Notamacropus_eugenii
ENSACAG00000004013	RBFOX1	98	67.176	ENSOPRG00000006199	-	93	67.176	Ochotona_princeps
ENSACAG00000004013	RBFOX1	100	86.466	ENSODEG00000013166	RBFOX1	99	86.935	Octodon_degus
ENSACAG00000004013	RBFOX1	85	84.911	ENSOANG00000002379	RBFOX1	89	84.911	Ornithorhynchus_anatinus
ENSACAG00000004013	RBFOX1	54	88.479	ENSOCUG00000001205	-	96	88.479	Oryctolagus_cuniculus
ENSACAG00000004013	RBFOX1	99	87.121	ENSOGAG00000025535	RBFOX1	99	87.121	Otolemur_garnettii
ENSACAG00000004013	RBFOX1	62	71.255	ENSOARG00000005135	RBFOX1	97	71.255	Ovis_aries
ENSACAG00000004013	RBFOX1	98	87.980	ENSPPAG00000036238	-	100	87.980	Pan_paniscus
ENSACAG00000004013	RBFOX1	98	85.751	ENSPPRG00000006546	RBFOX1	97	84.694	Panthera_pardus
ENSACAG00000004013	RBFOX1	98	76.471	ENSPTIG00000021154	RBFOX1	99	75.510	Panthera_tigris_altaica
ENSACAG00000004013	RBFOX1	98	86.005	ENSPTRG00000007744	RBFOX1	97	84.949	Pan_troglodytes
ENSACAG00000004013	RBFOX1	98	86.005	ENSPANG00000026500	RBFOX1	97	84.949	Papio_anubis
ENSACAG00000004013	RBFOX1	74	80.612	ENSPKIG00000019353	rbfox1	86	80.546	Paramormyrops_kingsleyae
ENSACAG00000004013	RBFOX1	99	80.905	ENSPKIG00000009667	-	95	81.132	Paramormyrops_kingsleyae
ENSACAG00000004013	RBFOX1	99	89.141	ENSPSIG00000006523	RBFOX1	98	89.141	Pelodiscus_sinensis
ENSACAG00000004013	RBFOX1	100	86.717	ENSPEMG00000017607	Rbfox1	99	86.717	Peromyscus_maniculatus_bairdii
ENSACAG00000004013	RBFOX1	73	83.959	ENSPCIG00000026887	RBFOX1	100	83.959	Phascolarctos_cinereus
ENSACAG00000004013	RBFOX1	84	85.030	ENSPPYG00000007079	-	84	85.030	Pongo_abelii
ENSACAG00000004013	RBFOX1	88	77.620	ENSPCAG00000002630	RBFOX1	93	77.620	Procavia_capensis
ENSACAG00000004013	RBFOX1	98	86.005	ENSPCOG00000025687	RBFOX1	97	84.949	Propithecus_coquereli
ENSACAG00000004013	RBFOX1	98	81.679	ENSPVAG00000013467	RBFOX1	93	81.679	Pteropus_vampyrus
ENSACAG00000004013	RBFOX1	95	78.947	ENSPNAG00000023109	rbfox1	100	78.947	Pygocentrus_nattereri
ENSACAG00000004013	RBFOX1	98	87.755	ENSRNOG00000002827	Rbfox1	93	87.755	Rattus_norvegicus
ENSACAG00000004013	RBFOX1	98	87.980	ENSRBIG00000044478	RBFOX1	100	87.980	Rhinopithecus_bieti
ENSACAG00000004013	RBFOX1	98	86.005	ENSRROG00000044411	RBFOX1	97	84.949	Rhinopithecus_roxellana
ENSACAG00000004013	RBFOX1	99	87.374	ENSSBOG00000033726	RBFOX1	98	87.374	Saimiri_boliviensis_boliviensis
ENSACAG00000004013	RBFOX1	100	86.717	ENSSHAG00000009257	RBFOX1	99	86.717	Sarcophilus_harrisii
ENSACAG00000004013	RBFOX1	88	69.274	ENSSFOG00015009955	-	83	69.274	Scleropages_formosus
ENSACAG00000004013	RBFOX1	76	89.655	ENSSFOG00015023675	rbfox1	88	89.655	Scleropages_formosus
ENSACAG00000004013	RBFOX1	98	74.572	ENSSMAG00000015505	rbfox1	92	74.572	Scophthalmus_maximus
ENSACAG00000004013	RBFOX1	98	72.475	ENSSDUG00000016413	rbfox1	99	72.222	Seriola_dumerili
ENSACAG00000004013	RBFOX1	85	69.679	ENSSLDG00000009353	rbfox1	97	67.857	Seriola_lalandi_dorsalis
ENSACAG00000004013	RBFOX1	85	80.758	ENSSPUG00000009732	RBFOX1	87	80.758	Sphenodon_punctatus
ENSACAG00000004013	RBFOX1	98	74.083	ENSSPAG00000009723	rbfox1	100	74.083	Stegastes_partitus
ENSACAG00000004013	RBFOX1	95	87.335	ENSSSCG00000007917	RBFOX1	91	87.335	Sus_scrofa
ENSACAG00000004013	RBFOX1	98	89.796	ENSTGUG00000004562	RBFOX1	100	89.796	Taeniopygia_guttata
ENSACAG00000004013	RBFOX1	98	73.284	ENSTRUG00000020940	rbfox1	99	73.284	Takifugu_rubripes
ENSACAG00000004013	RBFOX1	68	54.259	ENSTNIG00000002567	rbfox1	100	56.151	Tetraodon_nigroviridis
ENSACAG00000004013	RBFOX1	78	63.987	ENSTBEG00000009169	-	74	63.987	Tupaia_belangeri
ENSACAG00000004013	RBFOX1	98	85.242	ENSTTRG00000005700	RBFOX1	93	85.242	Tursiops_truncatus
ENSACAG00000004013	RBFOX1	98	81.633	ENSUAMG00000024633	RBFOX1	100	81.481	Ursus_americanus
ENSACAG00000004013	RBFOX1	98	73.980	ENSUMAG00000003579	RBFOX1	97	74.545	Ursus_maritimus
ENSACAG00000004013	RBFOX1	78	85.852	ENSVPAG00000001284	RBFOX1	74	85.852	Vicugna_pacos
ENSACAG00000004013	RBFOX1	98	88.010	ENSVVUG00000017311	RBFOX1	89	88.010	Vulpes_vulpes