EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000004071 (Gene tree)
Gene ID: 100552337
Gene Symbol: LARP1
Alias: KIAA0731|LARP|MGC19556
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 62916 bases
Position: chrGL343205.1:683097-746012
Accession: 100552337
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000021758	La	PF05383.17	4e-21	1	1
ENSACAP00000004020	La	PF05383.17	4.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000029178	LARP1-202	2843	-	ENSACAP00000021758	887 (aa)	-	R4G971
ENSACAT00000004112	LARP1-201	2931	XM_008114782	ENSACAP00000004020	976 (aa)	-	H9G8J2

Gene Model

Click here to download ENSACAG00000004071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000004071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000004071	LARP1	89	66.667	ENSACAG00000011338	LARP1B	89	62.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000004071	LARP1	100	79.434	ENSG00000155506	LARP1	99	83.486	Homo_sapiens
ENSACAG00000004071	LARP1	85	80.531	ENSAPOG00000020685	larp1	85	81.364	Acanthochromis_polyacanthus
ENSACAG00000004071	LARP1	100	79.696	ENSAMEG00000016673	LARP1	99	80.204	Ailuropoda_melanoleuca
ENSACAG00000004071	LARP1	97	70.252	ENSACIG00000012994	larp1	82	69.908	Amphilophus_citrinellus
ENSACAG00000004071	LARP1	92	71.944	ENSAOCG00000007792	larp1	99	71.944	Amphiprion_ocellaris
ENSACAG00000004071	LARP1	97	73.963	ENSAPEG00000022246	larp1	89	69.632	Amphiprion_percula
ENSACAG00000004071	LARP1	94	72.216	ENSATEG00000013523	larp1	84	70.501	Anabas_testudineus
ENSACAG00000004071	LARP1	90	91.839	ENSAPLG00000007559	LARP1	100	89.812	Anas_platyrhynchos
ENSACAG00000004071	LARP1	100	79.543	ENSANAG00000029949	LARP1	99	76.962	Aotus_nancymaae
ENSACAG00000004071	LARP1	97	72.299	ENSACLG00000015256	larp1	98	68.969	Astatotilapia_calliptera
ENSACAG00000004071	LARP1	94	76.310	ENSAMXG00000000859	larp1	85	72.688	Astyanax_mexicanus
ENSACAG00000004071	LARP1	100	79.543	ENSBTAG00000008443	LARP1	87	80.266	Bos_taurus
ENSACAG00000004071	LARP1	100	79.543	ENSCJAG00000004454	LARP1	94	79.775	Callithrix_jacchus
ENSACAG00000004071	LARP1	99	80.533	ENSCAFG00000017639	LARP1	99	80.533	Canis_familiaris
ENSACAG00000004071	LARP1	100	79.913	ENSCAFG00020023860	LARP1	100	80.371	Canis_lupus_dingo
ENSACAG00000004071	LARP1	100	79.543	ENSCHIG00000014414	LARP1	88	77.892	Capra_hircus
ENSACAG00000004071	LARP1	100	80.087	ENSTSYG00000013732	LARP1	99	77.926	Carlito_syrichta
ENSACAG00000004071	LARP1	93	79.027	ENSCAPG00000013865	LARP1	87	80.140	Cavia_aperea
ENSACAG00000004071	LARP1	100	79.805	ENSCPOG00000003377	LARP1	100	80.328	Cavia_porcellus
ENSACAG00000004071	LARP1	100	79.543	ENSCCAG00000025201	LARP1	94	79.673	Cebus_capucinus
ENSACAG00000004071	LARP1	100	79.217	ENSCATG00000030675	LARP1	94	79.430	Cercocebus_atys
ENSACAG00000004071	LARP1	100	79.957	ENSCLAG00000012755	LARP1	99	78.469	Chinchilla_lanigera
ENSACAG00000004071	LARP1	100	76.362	ENSCSAG00000010800	LARP1	100	76.714	Chlorocebus_sabaeus
ENSACAG00000004071	LARP1	91	74.530	ENSCHOG00000012716	LARP1	88	74.530	Choloepus_hoffmanni
ENSACAG00000004071	LARP1	100	89.741	ENSCPBG00000002173	LARP1	94	87.564	Chrysemys_picta_bellii
ENSACAG00000004071	LARP1	100	79.217	ENSCANG00000037418	LARP1	94	79.430	Colobus_angolensis_palliatus
ENSACAG00000004071	LARP1	100	79.188	ENSCGRG00001016913	Larp1	91	77.419	Cricetulus_griseus_chok1gshd
ENSACAG00000004071	LARP1	95	77.886	ENSCGRG00000009916	Larp1	99	77.886	Cricetulus_griseus_crigri
ENSACAG00000004071	LARP1	95	73.341	ENSCSEG00000016431	larp1	89	68.681	Cynoglossus_semilaevis
ENSACAG00000004071	LARP1	97	72.900	ENSCVAG00000022687	larp1	87	70.697	Cyprinodon_variegatus
ENSACAG00000004071	LARP1	97	69.540	ENSDARG00000101722	larp1	92	66.390	Danio_rerio
ENSACAG00000004071	LARP1	100	79.348	ENSDNOG00000012073	LARP1	87	79.694	Dasypus_novemcinctus
ENSACAG00000004071	LARP1	100	76.848	ENSDORG00000002897	Larp1	99	77.528	Dipodomys_ordii
ENSACAG00000004071	LARP1	91	82.697	ENSETEG00000020251	LARP1	100	82.697	Echinops_telfairi
ENSACAG00000004071	LARP1	100	79.370	ENSEASG00005001070	LARP1	86	83.596	Equus_asinus_asinus
ENSACAG00000004071	LARP1	100	79.479	ENSECAG00000017002	LARP1	67	83.596	Equus_caballus
ENSACAG00000004071	LARP1	100	75.217	ENSEEUG00000001065	LARP1	100	75.812	Erinaceus_europaeus
ENSACAG00000004071	LARP1	97	70.667	ENSELUG00000019403	larp1	87	69.223	Esox_lucius
ENSACAG00000004071	LARP1	100	79.913	ENSFCAG00000000592	LARP1	94	78.468	Felis_catus
ENSACAG00000004071	LARP1	94	88.517	ENSFALG00000008335	LARP1	100	89.115	Ficedula_albicollis
ENSACAG00000004071	LARP1	100	80.109	ENSFDAG00000021125	LARP1	100	80.286	Fukomys_damarensis
ENSACAG00000004071	LARP1	52	68.831	ENSFHEG00000020307	larp1	92	69.207	Fundulus_heteroclitus
ENSACAG00000004071	LARP1	100	88.976	ENSGALG00000040109	LARP1	95	84.734	Gallus_gallus
ENSACAG00000004071	LARP1	100	89.402	ENSGAGG00000025113	LARP1	97	90.192	Gopherus_agassizii
ENSACAG00000004071	LARP1	100	79.434	ENSGGOG00000006048	LARP1	94	79.673	Gorilla_gorilla
ENSACAG00000004071	LARP1	97	72.626	ENSHBUG00000020762	larp1	97	72.037	Haplochromis_burtoni
ENSACAG00000004071	LARP1	100	79.696	ENSHGLG00000006267	LARP1	86	79.253	Heterocephalus_glaber_female
ENSACAG00000004071	LARP1	100	79.696	ENSHGLG00100014230	-	100	80.020	Heterocephalus_glaber_male
ENSACAG00000004071	LARP1	98	68.201	ENSHGLG00100003395	-	87	68.405	Heterocephalus_glaber_male
ENSACAG00000004071	LARP1	88	78.322	ENSHCOG00000010786	larp1	83	80.000	Hippocampus_comes
ENSACAG00000004071	LARP1	94	71.124	ENSIPUG00000019105	Larp1	90	69.658	Ictalurus_punctatus
ENSACAG00000004071	LARP1	100	76.957	ENSSTOG00000005678	LARP1	99	77.528	Ictidomys_tridecemlineatus
ENSACAG00000004071	LARP1	100	74.726	ENSJJAG00000016950	Larp1	90	75.025	Jaculus_jaculus
ENSACAG00000004071	LARP1	94	73.495	ENSKMAG00000018468	larp1	96	69.547	Kryptolebias_marmoratus
ENSACAG00000004071	LARP1	97	72.926	ENSLBEG00000027172	larp1	85	69.597	Labrus_bergylta
ENSACAG00000004071	LARP1	90	80.851	ENSLOCG00000012457	larp1	91	76.133	Lepisosteus_oculatus
ENSACAG00000004071	LARP1	100	78.030	ENSLAFG00000008991	LARP1	89	78.797	Loxodonta_africana
ENSACAG00000004071	LARP1	100	78.999	ENSMFAG00000031651	LARP1	94	79.226	Macaca_fascicularis
ENSACAG00000004071	LARP1	100	76.253	ENSMMUG00000009411	LARP1	99	84.404	Macaca_mulatta
ENSACAG00000004071	LARP1	100	79.108	ENSMNEG00000039294	LARP1	100	79.239	Macaca_nemestrina
ENSACAG00000004071	LARP1	100	79.325	ENSMLEG00000035142	LARP1	94	79.532	Mandrillus_leucophaeus
ENSACAG00000004071	LARP1	94	76.303	ENSMAMG00000021788	larp1	86	70.631	Mastacembelus_armatus
ENSACAG00000004071	LARP1	97	72.222	ENSMZEG00005009345	larp1	98	68.969	Maylandia_zebra
ENSACAG00000004071	LARP1	100	88.307	ENSMGAG00000005696	LARP1	100	86.429	Meleagris_gallopavo
ENSACAG00000004071	LARP1	100	79.673	ENSMAUG00000001385	Larp1	91	77.890	Mesocricetus_auratus
ENSACAG00000004071	LARP1	100	79.022	ENSMICG00000000837	LARP1	99	83.748	Microcebus_murinus
ENSACAG00000004071	LARP1	100	79.289	ENSMOCG00000008920	Larp1	89	79.289	Microtus_ochrogaster
ENSACAG00000004071	LARP1	93	56.615	ENSMMOG00000013364	larp1	78	63.673	Mola_mola
ENSACAG00000004071	LARP1	100	82.675	ENSMODG00000008663	LARP1	99	81.818	Monodelphis_domestica
ENSACAG00000004071	LARP1	97	73.034	ENSMALG00000017180	larp1	95	69.087	Monopterus_albus
ENSACAG00000004071	LARP1	100	79.086	MGP_CAROLIEiJ_G0016383	Larp1	89	79.086	Mus_caroli
ENSACAG00000004071	LARP1	98	79.979	ENSMUSG00000037331	Larp1	88	79.979	Mus_musculus
ENSACAG00000004071	LARP1	100	79.289	MGP_PahariEiJ_G0017518	Larp1	89	79.289	Mus_pahari
ENSACAG00000004071	LARP1	98	79.979	MGP_SPRETEiJ_G0017225	Larp1	88	79.979	Mus_spretus
ENSACAG00000004071	LARP1	78	80.965	ENSMPUG00000013564	LARP1	84	80.965	Mustela_putorius_furo
ENSACAG00000004071	LARP1	98	78.008	ENSMLUG00000002608	LARP1	99	78.008	Myotis_lucifugus
ENSACAG00000004071	LARP1	100	75.813	ENSNGAG00000001098	Larp1	99	76.609	Nannospalax_galili
ENSACAG00000004071	LARP1	94	74.259	ENSNBRG00000008963	larp1	91	70.106	Neolamprologus_brichardi
ENSACAG00000004071	LARP1	100	78.156	ENSNLEG00000016588	LARP1	99	75.587	Nomascus_leucogenys
ENSACAG00000004071	LARP1	100	78.738	ENSMEUG00000002957	LARP1	99	76.556	Notamacropus_eugenii
ENSACAG00000004071	LARP1	95	82.189	ENSOPRG00000013014	LARP1	100	79.367	Ochotona_princeps
ENSACAG00000004071	LARP1	100	79.805	ENSODEG00000010824	LARP1	100	79.775	Octodon_degus
ENSACAG00000004071	LARP1	97	72.433	ENSONIG00000017308	larp1	87	71.576	Oreochromis_niloticus
ENSACAG00000004071	LARP1	100	85.699	ENSOANG00000005096	LARP1	98	85.466	Ornithorhynchus_anatinus
ENSACAG00000004071	LARP1	100	80.022	ENSOCUG00000013066	LARP1	89	80.470	Oryctolagus_cuniculus
ENSACAG00000004071	LARP1	97	71.445	ENSORLG00000000824	larp1	99	72.825	Oryzias_latipes
ENSACAG00000004071	LARP1	97	71.557	ENSORLG00020022241	larp1	88	69.262	Oryzias_latipes_hni
ENSACAG00000004071	LARP1	97	71.333	ENSORLG00015007538	larp1	89	68.347	Oryzias_latipes_hsok
ENSACAG00000004071	LARP1	97	71.285	ENSOMEG00000003134	larp1	89	69.057	Oryzias_melastigma
ENSACAG00000004071	LARP1	100	79.135	ENSOGAG00000016750	LARP1	100	79.388	Otolemur_garnettii
ENSACAG00000004071	LARP1	100	77.802	ENSOARG00000009893	LARP1	100	78.119	Ovis_aries
ENSACAG00000004071	LARP1	100	79.434	ENSPPAG00000042993	LARP1	94	79.673	Pan_paniscus
ENSACAG00000004071	LARP1	100	78.284	ENSPPRG00000009780	LARP1	94	78.484	Panthera_pardus
ENSACAG00000004071	LARP1	100	78.393	ENSPTIG00000007013	LARP1	94	78.791	Panthera_tigris_altaica
ENSACAG00000004071	LARP1	100	79.325	ENSPTRG00000017447	LARP1	94	79.571	Pan_troglodytes
ENSACAG00000004071	LARP1	100	79.217	ENSPANG00000008080	LARP1	94	79.430	Papio_anubis
ENSACAG00000004071	LARP1	96	70.128	ENSPKIG00000017153	-	79	73.831	Paramormyrops_kingsleyae
ENSACAG00000004071	LARP1	96	74.400	ENSPKIG00000010096	larp1	88	71.959	Paramormyrops_kingsleyae
ENSACAG00000004071	LARP1	89	74.055	ENSPMGG00000011599	larp1	88	69.536	Periophthalmus_magnuspinnatus
ENSACAG00000004071	LARP1	100	75.892	ENSPEMG00000022523	Larp1	99	76.555	Peromyscus_maniculatus_bairdii
ENSACAG00000004071	LARP1	98	83.687	ENSPCIG00000019242	LARP1	80	85.180	Phascolarctos_cinereus
ENSACAG00000004071	LARP1	97	69.613	ENSPFOG00000005836	larp1	88	67.333	Poecilia_formosa
ENSACAG00000004071	LARP1	97	69.503	ENSPLAG00000008936	larp1	88	68.122	Poecilia_latipinna
ENSACAG00000004071	LARP1	97	70.111	ENSPMEG00000013656	larp1	88	67.532	Poecilia_mexicana
ENSACAG00000004071	LARP1	97	70.222	ENSPREG00000005726	larp1	99	67.433	Poecilia_reticulata
ENSACAG00000004071	LARP1	99	77.536	ENSPCAG00000006407	LARP1	99	77.536	Procavia_capensis
ENSACAG00000004071	LARP1	100	71.336	ENSPCOG00000016949	LARP1	100	75.000	Propithecus_coquereli
ENSACAG00000004071	LARP1	100	79.153	ENSPVAG00000002262	LARP1	87	79.817	Pteropus_vampyrus
ENSACAG00000004071	LARP1	97	72.333	ENSPNYG00000007938	larp1	98	68.969	Pundamilia_nyererei
ENSACAG00000004071	LARP1	97	72.644	ENSPNAG00000021427	larp1	89	71.324	Pygocentrus_nattereri
ENSACAG00000004071	LARP1	100	76.108	ENSRNOG00000031544	Larp1	99	76.704	Rattus_norvegicus
ENSACAG00000004071	LARP1	100	79.108	ENSRBIG00000038005	LARP1	94	79.328	Rhinopithecus_bieti
ENSACAG00000004071	LARP1	100	79.108	ENSRROG00000034073	LARP1	100	79.239	Rhinopithecus_roxellana
ENSACAG00000004071	LARP1	100	79.543	ENSSBOG00000019816	LARP1	99	77.152	Saimiri_boliviensis_boliviensis
ENSACAG00000004071	LARP1	99	84.804	ENSSHAG00000011115	LARP1	99	83.834	Sarcophilus_harrisii
ENSACAG00000004071	LARP1	95	73.003	ENSSFOG00015020304	larp1	95	68.818	Scleropages_formosus
ENSACAG00000004071	LARP1	99	72.912	ENSSFOG00015018058	-	87	69.681	Scleropages_formosus
ENSACAG00000004071	LARP1	90	74.410	ENSSMAG00000007468	larp1	84	71.840	Scophthalmus_maximus
ENSACAG00000004071	LARP1	97	71.667	ENSSDUG00000000268	larp1	97	70.662	Seriola_dumerili
ENSACAG00000004071	LARP1	97	70.776	ENSSLDG00000016505	larp1	97	70.776	Seriola_lalandi_dorsalis
ENSACAG00000004071	LARP1	69	81.231	ENSSARG00000013907	-	88	83.385	Sorex_araneus
ENSACAG00000004071	LARP1	100	91.226	ENSSPUG00000012179	-	85	88.730	Sphenodon_punctatus
ENSACAG00000004071	LARP1	98	71.021	ENSSPAG00000003910	larp1	87	69.192	Stegastes_partitus
ENSACAG00000004071	LARP1	100	79.501	ENSSSCG00000017069	LARP1	100	79.956	Sus_scrofa
ENSACAG00000004071	LARP1	95	87.256	ENSTGUG00000000704	LARP1	100	87.852	Taeniopygia_guttata
ENSACAG00000004071	LARP1	99	72.191	ENSTRUG00000009470	larp1	88	67.774	Takifugu_rubripes
ENSACAG00000004071	LARP1	92	80.894	ENSTBEG00000003381	LARP1	100	80.894	Tupaia_belangeri
ENSACAG00000004071	LARP1	100	79.113	ENSTTRG00000015934	LARP1	100	79.980	Tursiops_truncatus
ENSACAG00000004071	LARP1	100	79.805	ENSUAMG00000019334	LARP1	87	80.224	Ursus_americanus
ENSACAG00000004071	LARP1	99	78.261	ENSUMAG00000002934	LARP1	99	78.122	Ursus_maritimus
ENSACAG00000004071	LARP1	100	79.913	ENSVVUG00000004644	LARP1	100	80.371	Vulpes_vulpes
ENSACAG00000004071	LARP1	99	79.599	ENSXETG00000008413	larp1	92	77.505	Xenopus_tropicalis
ENSACAG00000004071	LARP1	98	64.779	ENSXCOG00000004022	larp1	80	72.959	Xiphophorus_couchianus
ENSACAG00000004071	LARP1	97	70.000	ENSXMAG00000018780	larp1	89	67.198	Xiphophorus_maculatus