EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000004088 (Gene tree)
Gene ID: 100566260
Gene Symbol: RNPS1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 4900 bases
Position: chrGL343649.1:3755-8654
Accession: 100566260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000004006	RRM_1	PF00076.22	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000004098	RNPS1-201	2054	XM_003228451	ENSACAP00000004006	245 (aa)	XP_003228499	H9G8I7

Gene Model

Click here to download ENSACAG00000004088's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03013	RNA transport	KEGG
acs03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000004088's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000004088	RNPS1	94	90.987	ENSG00000205937	RNPS1	100	94.675	Homo_sapiens
ENSACAG00000004088	RNPS1	84	64.115	ENSAPOG00000014649	-	73	60.377	Acanthochromis_polyacanthus
ENSACAG00000004088	RNPS1	94	90.987	ENSAMEG00000017861	RNPS1	76	90.987	Ailuropoda_melanoleuca
ENSACAG00000004088	RNPS1	89	60.274	ENSACIG00000014367	-	71	66.169	Amphilophus_citrinellus
ENSACAG00000004088	RNPS1	94	58.798	ENSAPLG00000006231	RNPS1	56	82.828	Anas_platyrhynchos
ENSACAG00000004088	RNPS1	94	90.558	ENSANAG00000028802	RNPS1	78	93.035	Aotus_nancymaae
ENSACAG00000004088	RNPS1	94	84.914	ENSANAG00000029802	-	86	87.946	Aotus_nancymaae
ENSACAG00000004088	RNPS1	93	55.556	ENSACLG00000021537	-	80	64.286	Astatotilapia_calliptera
ENSACAG00000004088	RNPS1	90	66.968	ENSAMXG00000006330	-	88	66.063	Astyanax_mexicanus
ENSACAG00000004088	RNPS1	94	90.987	ENSBTAG00000009969	RNPS1	76	90.987	Bos_taurus
ENSACAG00000004088	RNPS1	94	90.987	ENSCJAG00000014969	RNPS1	96	92.889	Callithrix_jacchus
ENSACAG00000004088	RNPS1	94	90.987	ENSCAFG00000019397	RNPS1	76	90.987	Canis_familiaris
ENSACAG00000004088	RNPS1	94	90.987	ENSCAFG00020026159	RNPS1	97	92.889	Canis_lupus_dingo
ENSACAG00000004088	RNPS1	82	93.564	ENSCHIG00000014621	-	68	93.564	Capra_hircus
ENSACAG00000004088	RNPS1	94	87.124	ENSTSYG00000031848	-	95	87.124	Carlito_syrichta
ENSACAG00000004088	RNPS1	94	90.987	ENSTSYG00000001629	RNPS1	79	92.386	Carlito_syrichta
ENSACAG00000004088	RNPS1	94	90.558	ENSCAPG00000007731	RNPS1	76	90.558	Cavia_aperea
ENSACAG00000004088	RNPS1	94	90.558	ENSCPOG00000002066	RNPS1	76	90.558	Cavia_porcellus
ENSACAG00000004088	RNPS1	94	90.558	ENSCCAG00000034480	RNPS1	78	93.035	Cebus_capucinus
ENSACAG00000004088	RNPS1	94	85.345	ENSCATG00000042361	-	77	85.345	Cercocebus_atys
ENSACAG00000004088	RNPS1	94	90.987	ENSCATG00000013756	RNPS1	93	92.920	Cercocebus_atys
ENSACAG00000004088	RNPS1	94	90.987	ENSCLAG00000015546	RNPS1	76	90.987	Chinchilla_lanigera
ENSACAG00000004088	RNPS1	84	89.952	ENSCSAG00000005219	-	70	89.952	Chlorocebus_sabaeus
ENSACAG00000004088	RNPS1	94	88.841	ENSCHOG00000004866	RNPS1	76	88.841	Choloepus_hoffmanni
ENSACAG00000004088	RNPS1	96	91.026	ENSCANG00000041307	RNPS1	96	91.026	Colobus_angolensis_palliatus
ENSACAG00000004088	RNPS1	83	80.193	ENSCANG00000030189	-	63	80.247	Colobus_angolensis_palliatus
ENSACAG00000004088	RNPS1	94	90.987	ENSCGRG00001020431	Rnps1	76	90.987	Cricetulus_griseus_chok1gshd
ENSACAG00000004088	RNPS1	94	90.987	ENSCGRG00000014021	Rnps1	77	90.987	Cricetulus_griseus_crigri
ENSACAG00000004088	RNPS1	93	63.362	ENSCSEG00000000402	RNPS1	75	62.069	Cynoglossus_semilaevis
ENSACAG00000004088	RNPS1	94	90.987	ENSDNOG00000016081	RNPS1	76	90.987	Dasypus_novemcinctus
ENSACAG00000004088	RNPS1	81	67.839	ENSDNOG00000038751	-	98	68.367	Dasypus_novemcinctus
ENSACAG00000004088	RNPS1	94	90.129	ENSDORG00000001755	Rnps1	76	90.129	Dipodomys_ordii
ENSACAG00000004088	RNPS1	94	90.987	ENSEASG00005004862	RNPS1	76	90.987	Equus_asinus_asinus
ENSACAG00000004088	RNPS1	93	92.544	ENSECAG00000023288	RNPS1	82	92.544	Equus_caballus
ENSACAG00000004088	RNPS1	94	90.558	ENSFCAG00000007690	RNPS1	79	92.157	Felis_catus
ENSACAG00000004088	RNPS1	85	92.857	ENSFALG00000004868	RNPS1	74	92.857	Ficedula_albicollis
ENSACAG00000004088	RNPS1	94	90.129	ENSFDAG00000003386	RNPS1	76	90.129	Fukomys_damarensis
ENSACAG00000004088	RNPS1	84	92.823	ENSGALG00000009288	RNPS1	74	92.823	Gallus_gallus
ENSACAG00000004088	RNPS1	94	92.275	ENSGAGG00000010452	RNPS1	76	92.275	Gopherus_agassizii
ENSACAG00000004088	RNPS1	94	90.987	ENSGGOG00000014275	RNPS1	95	92.920	Gorilla_gorilla
ENSACAG00000004088	RNPS1	83	90.686	ENSGGOG00000026421	-	78	90.686	Gorilla_gorilla
ENSACAG00000004088	RNPS1	85	58.294	ENSHBUG00000017337	-	73	66.825	Haplochromis_burtoni
ENSACAG00000004088	RNPS1	94	88.841	ENSHGLG00000006292	-	92	88.841	Heterocephalus_glaber_female
ENSACAG00000004088	RNPS1	94	90.987	ENSHGLG00000013957	RNPS1	76	90.987	Heterocephalus_glaber_female
ENSACAG00000004088	RNPS1	94	90.987	ENSHGLG00100003539	RNPS1	76	90.987	Heterocephalus_glaber_male
ENSACAG00000004088	RNPS1	94	81.974	ENSHGLG00100001721	-	76	81.545	Heterocephalus_glaber_male
ENSACAG00000004088	RNPS1	83	85.294	ENSHGLG00100011610	-	90	80.090	Heterocephalus_glaber_male
ENSACAG00000004088	RNPS1	97	74.477	ENSHGLG00100017879	-	79	63.598	Heterocephalus_glaber_male
ENSACAG00000004088	RNPS1	84	86.603	ENSHGLG00100015267	-	75	86.603	Heterocephalus_glaber_male
ENSACAG00000004088	RNPS1	94	90.558	ENSJJAG00000015576	-	76	90.558	Jaculus_jaculus
ENSACAG00000004088	RNPS1	84	84.211	ENSLACG00000007112	RNPS1	74	84.211	Latimeria_chalumnae
ENSACAG00000004088	RNPS1	84	63.636	ENSLOCG00000001758	RNPS1	73	80.861	Lepisosteus_oculatus
ENSACAG00000004088	RNPS1	94	90.987	ENSMFAG00000042142	RNPS1	79	93.564	Macaca_fascicularis
ENSACAG00000004088	RNPS1	82	93.564	ENSMMUG00000019238	-	79	93.564	Macaca_mulatta
ENSACAG00000004088	RNPS1	94	85.837	ENSMMUG00000041726	-	81	85.837	Macaca_mulatta
ENSACAG00000004088	RNPS1	94	86.266	ENSMNEG00000024827	-	81	86.266	Macaca_nemestrina
ENSACAG00000004088	RNPS1	83	85.784	ENSMLEG00000040232	-	80	85.784	Mandrillus_leucophaeus
ENSACAG00000004088	RNPS1	94	90.987	ENSMLEG00000036928	RNPS1	79	93.564	Mandrillus_leucophaeus
ENSACAG00000004088	RNPS1	93	63.203	ENSMAMG00000021148	-	68	66.822	Mastacembelus_armatus
ENSACAG00000004088	RNPS1	84	58.095	ENSMZEG00005006256	-	74	66.667	Maylandia_zebra
ENSACAG00000004088	RNPS1	93	91.775	ENSMGAG00000010042	RNPS1	95	91.775	Meleagris_gallopavo
ENSACAG00000004088	RNPS1	94	90.558	ENSMICG00000031543	RNPS1	76	90.558	Microcebus_murinus
ENSACAG00000004088	RNPS1	94	90.987	ENSMOCG00000003429	Rnps1	76	90.987	Microtus_ochrogaster
ENSACAG00000004088	RNPS1	82	64.677	ENSMMOG00000010863	RNPS1	71	63.184	Mola_mola
ENSACAG00000004088	RNPS1	94	77.350	ENSMODG00000015891	RNPS1	76	79.915	Monodelphis_domestica
ENSACAG00000004088	RNPS1	53	93.798	MGP_CAROLIEiJ_G0021182	-	73	65.665	Mus_caroli
ENSACAG00000004088	RNPS1	94	90.987	ENSMUSG00000034681	Rnps1	76	90.987	Mus_musculus
ENSACAG00000004088	RNPS1	94	90.129	MGP_PahariEiJ_G0023498	Rnps1	76	90.129	Mus_pahari
ENSACAG00000004088	RNPS1	94	90.987	MGP_SPRETEiJ_G0022092	Rnps1	76	90.987	Mus_spretus
ENSACAG00000004088	RNPS1	94	90.987	ENSMLUG00000016808	RNPS1	76	90.987	Myotis_lucifugus
ENSACAG00000004088	RNPS1	94	90.558	ENSNGAG00000023702	Rnps1	76	90.558	Nannospalax_galili
ENSACAG00000004088	RNPS1	87	57.143	ENSNBRG00000014540	-	81	63.274	Neolamprologus_brichardi
ENSACAG00000004088	RNPS1	89	61.644	ENSNBRG00000023437	RNPS1	71	64.677	Neolamprologus_brichardi
ENSACAG00000004088	RNPS1	94	90.987	ENSNLEG00000009243	RNPS1	86	90.987	Nomascus_leucogenys
ENSACAG00000004088	RNPS1	94	89.270	ENSMEUG00000008882	RNPS1	76	89.270	Notamacropus_eugenii
ENSACAG00000004088	RNPS1	94	88.412	ENSOPRG00000016422	RNPS1	76	88.412	Ochotona_princeps
ENSACAG00000004088	RNPS1	94	90.987	ENSOARG00000018056	-	65	90.987	Ovis_aries
ENSACAG00000004088	RNPS1	92	92.478	ENSPPAG00000037836	-	95	92.478	Pan_paniscus
ENSACAG00000004088	RNPS1	99	82.449	ENSPPAG00000011845	RNPS1	87	85.837	Pan_paniscus
ENSACAG00000004088	RNPS1	94	90.558	ENSPPRG00000011255	RNPS1	79	92.157	Panthera_pardus
ENSACAG00000004088	RNPS1	76	77.391	ENSPTIG00000015643	RNPS1	72	82.222	Panthera_tigris_altaica
ENSACAG00000004088	RNPS1	93	90.789	ENSPTRG00000046326	-	87	90.789	Pan_troglodytes
ENSACAG00000004088	RNPS1	94	90.558	ENSPTRG00000031310	RNPS1	79	93.069	Pan_troglodytes
ENSACAG00000004088	RNPS1	82	67.500	ENSPANG00000033576	-	74	68.182	Papio_anubis
ENSACAG00000004088	RNPS1	94	90.987	ENSPANG00000015748	RNPS1	79	93.564	Papio_anubis
ENSACAG00000004088	RNPS1	84	77.143	ENSPKIG00000023465	RNPS1	74	77.143	Paramormyrops_kingsleyae
ENSACAG00000004088	RNPS1	94	90.987	ENSPSIG00000006048	RNPS1	76	90.987	Pelodiscus_sinensis
ENSACAG00000004088	RNPS1	94	90.987	ENSPEMG00000012797	Rnps1	76	90.987	Peromyscus_maniculatus_bairdii
ENSACAG00000004088	RNPS1	94	89.270	ENSPCIG00000025012	RNPS1	76	89.270	Phascolarctos_cinereus
ENSACAG00000004088	RNPS1	76	80.000	ENSPCIG00000016114	-	67	80.612	Phascolarctos_cinereus
ENSACAG00000004088	RNPS1	94	87.983	ENSPCAG00000004514	RNPS1	76	87.983	Procavia_capensis
ENSACAG00000004088	RNPS1	94	90.558	ENSPCOG00000005478	RNPS1	82	93.069	Propithecus_coquereli
ENSACAG00000004088	RNPS1	94	90.558	ENSPVAG00000005105	RNPS1	76	90.558	Pteropus_vampyrus
ENSACAG00000004088	RNPS1	84	69.856	ENSPNAG00000025479	RNPS1	73	69.378	Pygocentrus_nattereri
ENSACAG00000004088	RNPS1	94	90.558	ENSRNOG00000008703	Rnps1	76	90.558	Rattus_norvegicus
ENSACAG00000004088	RNPS1	91	80.531	ENSRNOG00000027239	AABR07037800.1	73	79.204	Rattus_norvegicus
ENSACAG00000004088	RNPS1	94	86.920	ENSRBIG00000038965	-	90	86.878	Rhinopithecus_bieti
ENSACAG00000004088	RNPS1	96	91.026	ENSRROG00000041252	RNPS1	96	91.026	Rhinopithecus_roxellana
ENSACAG00000004088	RNPS1	94	90.987	ENSSBOG00000027927	RNPS1	78	93.532	Saimiri_boliviensis_boliviensis
ENSACAG00000004088	RNPS1	94	89.270	ENSSHAG00000016951	RNPS1	76	89.270	Sarcophilus_harrisii
ENSACAG00000004088	RNPS1	85	70.952	ENSSFOG00015019341	-	72	65.842	Scleropages_formosus
ENSACAG00000004088	RNPS1	79	68.557	ENSSLDG00000021341	RNPS1	71	69.271	Seriola_lalandi_dorsalis
ENSACAG00000004088	RNPS1	94	88.841	ENSSARG00000001577	RNPS1	83	88.841	Sorex_araneus
ENSACAG00000004088	RNPS1	94	92.704	ENSSPUG00000016588	RNPS1	76	92.704	Sphenodon_punctatus
ENSACAG00000004088	RNPS1	94	91.416	ENSSSCG00000008048	RNPS1	76	91.416	Sus_scrofa
ENSACAG00000004088	RNPS1	85	92.381	ENSTGUG00000003237	RNPS1	74	92.381	Taeniopygia_guttata
ENSACAG00000004088	RNPS1	87	67.442	ENSTRUG00000008602	RNPS1	75	67.757	Takifugu_rubripes
ENSACAG00000004088	RNPS1	88	67.890	ENSTNIG00000009753	RNPS1	75	68.203	Tetraodon_nigroviridis
ENSACAG00000004088	RNPS1	94	90.987	ENSTBEG00000009098	RNPS1	86	90.987	Tupaia_belangeri
ENSACAG00000004088	RNPS1	94	90.987	ENSTTRG00000008220	RNPS1	76	90.987	Tursiops_truncatus
ENSACAG00000004088	RNPS1	94	90.987	ENSUAMG00000004462	RNPS1	85	90.987	Ursus_americanus
ENSACAG00000004088	RNPS1	94	90.987	ENSUMAG00000022327	RNPS1	76	90.987	Ursus_maritimus
ENSACAG00000004088	RNPS1	94	90.987	ENSVVUG00000009244	RNPS1	76	90.987	Vulpes_vulpes
ENSACAG00000004088	RNPS1	91	68.000	ENSXETG00000024439	rnps1	73	68.889	Xenopus_tropicalis