EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000004222 (Gene tree)
Gene ID: 100556150
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 12658 bases
Position: chrGL343538.1:473895-486552
Accession: 100556150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000004182	MMR_HSR1	PF01926.23	1.1e-14	1	1
ENSACAP00000022182	MMR_HSR1	PF01926.23	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000004281	LSG1-202	4436	XM_008121234	ENSACAP00000004182	623 (aa)	XP_008119441	H9G8S3
ENSACAT00000029599	LSG1-201	5365	-	ENSACAP00000022182	645 (aa)	-	R4GA93

Gene Model

Click here to download ENSACAG00000004222's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000004222's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000004222	LSG1	99	64.241	ENSG00000041802	LSG1	79	81.560	Homo_sapiens
ENSACAG00000004222	LSG1	100	61.981	ENSAPOG00000009694	lsg1	95	62.102	Acanthochromis_polyacanthus
ENSACAG00000004222	LSG1	99	64.455	ENSAMEG00000009343	LSG1	95	64.929	Ailuropoda_melanoleuca
ENSACAG00000004222	LSG1	100	62.440	ENSACIG00000012406	lsg1	95	61.958	Amphilophus_citrinellus
ENSACAG00000004222	LSG1	100	62.261	ENSAOCG00000016066	lsg1	95	62.381	Amphiprion_ocellaris
ENSACAG00000004222	LSG1	100	61.905	ENSAPEG00000003252	lsg1	95	62.063	Amphiprion_percula
ENSACAG00000004222	LSG1	100	61.661	ENSATEG00000011794	lsg1	94	62.872	Anabas_testudineus
ENSACAG00000004222	LSG1	99	65.024	ENSANAG00000021153	LSG1	95	65.556	Aotus_nancymaae
ENSACAG00000004222	LSG1	100	60.436	ENSACLG00000000520	lsg1	95	60.597	Astatotilapia_calliptera
ENSACAG00000004222	LSG1	100	59.844	ENSAMXG00000008271	lsg1	95	60.126	Astyanax_mexicanus
ENSACAG00000004222	LSG1	99	64.115	ENSBTAG00000008461	LSG1	95	65.024	Bos_taurus
ENSACAG00000004222	LSG1	74	51.282	WBGene00016907	C53H9.2	87	51.282	Caenorhabditis_elegans
ENSACAG00000004222	LSG1	99	64.229	ENSCJAG00000013962	LSG1	95	65.238	Callithrix_jacchus
ENSACAG00000004222	LSG1	99	63.608	ENSCAFG00000013445	LSG1	99	64.399	Canis_familiaris
ENSACAG00000004222	LSG1	99	63.033	ENSCAFG00020002216	LSG1	99	63.694	Canis_lupus_dingo
ENSACAG00000004222	LSG1	99	65.342	ENSCHIG00000015769	LSG1	95	66.188	Capra_hircus
ENSACAG00000004222	LSG1	99	64.929	ENSTSYG00000001447	LSG1	95	65.293	Carlito_syrichta
ENSACAG00000004222	LSG1	99	63.505	ENSCAPG00000009856	LSG1	99	63.826	Cavia_aperea
ENSACAG00000004222	LSG1	99	63.911	ENSCCAG00000035744	LSG1	95	64.127	Cebus_capucinus
ENSACAG00000004222	LSG1	99	64.659	ENSCATG00000042060	LSG1	95	63.449	Cercocebus_atys
ENSACAG00000004222	LSG1	99	64.547	ENSCSAG00000008796	LSG1	87	65.079	Chlorocebus_sabaeus
ENSACAG00000004222	LSG1	100	65.934	ENSCPBG00000015941	LSG1	79	65.938	Chrysemys_picta_bellii
ENSACAG00000004222	LSG1	69	61.929	ENSCING00000007079	-	92	61.929	Ciona_intestinalis
ENSACAG00000004222	LSG1	76	54.673	ENSCSAVG00000002514	-	83	61.929	Ciona_savignyi
ENSACAG00000004222	LSG1	99	64.229	ENSCANG00000030709	LSG1	95	64.762	Colobus_angolensis_palliatus
ENSACAG00000004222	LSG1	99	63.550	ENSCGRG00001019846	Lsg1	95	64.480	Cricetulus_griseus_chok1gshd
ENSACAG00000004222	LSG1	99	63.550	ENSCGRG00000014617	Lsg1	95	64.480	Cricetulus_griseus_crigri
ENSACAG00000004222	LSG1	100	60.781	ENSCSEG00000008522	lsg1	95	60.781	Cynoglossus_semilaevis
ENSACAG00000004222	LSG1	100	62.102	ENSCVAG00000002484	lsg1	95	61.490	Cyprinodon_variegatus
ENSACAG00000004222	LSG1	100	60.960	ENSDARG00000015352	lsg1	95	61.600	Danio_rerio
ENSACAG00000004222	LSG1	99	64.444	ENSDNOG00000006224	LSG1	95	64.490	Dasypus_novemcinctus
ENSACAG00000004222	LSG1	99	48.160	FBgn0266284	Ns3	94	47.840	Drosophila_melanogaster
ENSACAG00000004222	LSG1	87	88.095	ENSETEG00000003888	LSG1	84	88.095	Echinops_telfairi
ENSACAG00000004222	LSG1	93	56.229	ENSEBUG00000003119	lsg1	84	56.229	Eptatretus_burgeri
ENSACAG00000004222	LSG1	99	64.715	ENSEASG00005000678	LSG1	95	65.769	Equus_asinus_asinus
ENSACAG00000004222	LSG1	99	64.873	ENSECAG00000017659	LSG1	95	65.610	Equus_caballus
ENSACAG00000004222	LSG1	79	62.760	ENSEEUG00000015217	LSG1	75	63.021	Erinaceus_europaeus
ENSACAG00000004222	LSG1	100	61.244	ENSELUG00000023973	lsg1	95	60.766	Esox_lucius
ENSACAG00000004222	LSG1	99	64.603	ENSFCAG00000024957	LSG1	95	64.921	Felis_catus
ENSACAG00000004222	LSG1	97	62.857	ENSFALG00000007210	LSG1	94	63.449	Ficedula_albicollis
ENSACAG00000004222	LSG1	99	64.706	ENSFDAG00000017373	LSG1	95	65.016	Fukomys_damarensis
ENSACAG00000004222	LSG1	99	61.587	ENSFHEG00000003680	lsg1	94	60.794	Fundulus_heteroclitus
ENSACAG00000004222	LSG1	85	72.247	ENSGMOG00000015834	lsg1	94	58.560	Gadus_morhua
ENSACAG00000004222	LSG1	97	62.399	ENSGALG00000007058	LSG1	82	63.974	Gallus_gallus
ENSACAG00000004222	LSG1	99	62.158	ENSGAFG00000015831	lsg1	94	61.440	Gambusia_affinis
ENSACAG00000004222	LSG1	99	61.563	ENSGACG00000009323	lsg1	94	60.766	Gasterosteus_aculeatus
ENSACAG00000004222	LSG1	99	64.151	ENSGGOG00000000520	LSG1	95	64.678	Gorilla_gorilla
ENSACAG00000004222	LSG1	100	61.356	ENSHBUG00000005659	lsg1	95	61.526	Haplochromis_burtoni
ENSACAG00000004222	LSG1	99	62.780	ENSHGLG00000017390	LSG1	94	63.593	Heterocephalus_glaber_female
ENSACAG00000004222	LSG1	99	62.620	ENSHGLG00100018587	LSG1	94	63.434	Heterocephalus_glaber_male
ENSACAG00000004222	LSG1	100	61.270	ENSHCOG00000016848	lsg1	95	60.731	Hippocampus_comes
ENSACAG00000004222	LSG1	100	61.783	ENSIPUG00000008631	lsg1	95	61.783	Ictalurus_punctatus
ENSACAG00000004222	LSG1	80	56.890	ENSSTOG00000010234	LSG1	92	58.071	Ictidomys_tridecemlineatus
ENSACAG00000004222	LSG1	99	65.127	ENSJJAG00000015513	Lsg1	95	65.501	Jaculus_jaculus
ENSACAG00000004222	LSG1	100	60.856	ENSKMAG00000009681	lsg1	95	59.404	Kryptolebias_marmoratus
ENSACAG00000004222	LSG1	100	64.890	ENSLACG00000013399	LSG1	95	64.907	Latimeria_chalumnae
ENSACAG00000004222	LSG1	100	63.016	ENSLOCG00000004918	lsg1	95	63.722	Lepisosteus_oculatus
ENSACAG00000004222	LSG1	99	63.535	ENSLAFG00000012919	-	95	64.593	Loxodonta_africana
ENSACAG00000004222	LSG1	99	64.659	ENSMFAG00000039903	LSG1	95	63.449	Macaca_fascicularis
ENSACAG00000004222	LSG1	99	64.501	ENSMMUG00000010708	LSG1	95	65.032	Macaca_mulatta
ENSACAG00000004222	LSG1	99	64.501	ENSMNEG00000031538	LSG1	95	63.133	Macaca_nemestrina
ENSACAG00000004222	LSG1	99	64.501	ENSMLEG00000041184	LSG1	95	65.032	Mandrillus_leucophaeus
ENSACAG00000004222	LSG1	100	59.968	ENSMAMG00000000470	lsg1	95	59.425	Mastacembelus_armatus
ENSACAG00000004222	LSG1	100	61.356	ENSMZEG00005017865	lsg1	95	61.526	Maylandia_zebra
ENSACAG00000004222	LSG1	93	62.689	ENSMGAG00000007050	LSG1	99	64.154	Meleagris_gallopavo
ENSACAG00000004222	LSG1	90	65.187	ENSMAUG00000016976	Lsg1	87	66.075	Mesocricetus_auratus
ENSACAG00000004222	LSG1	99	63.333	ENSMICG00000049087	LSG1	95	64.070	Microcebus_murinus
ENSACAG00000004222	LSG1	99	63.550	ENSMOCG00000022136	Lsg1	95	64.444	Microtus_ochrogaster
ENSACAG00000004222	LSG1	84	73.733	ENSMMOG00000008884	lsg1	94	58.266	Mola_mola
ENSACAG00000004222	LSG1	100	56.740	ENSMODG00000019828	LSG1	95	56.583	Monodelphis_domestica
ENSACAG00000004222	LSG1	99	63.636	MGP_CAROLIEiJ_G0020648	Lsg1	95	63.854	Mus_caroli
ENSACAG00000004222	LSG1	99	63.091	ENSMUSG00000022538	Lsg1	95	63.823	Mus_musculus
ENSACAG00000004222	LSG1	99	64.331	MGP_PahariEiJ_G0016352	Lsg1	94	64.207	Mus_pahari
ENSACAG00000004222	LSG1	99	63.291	MGP_SPRETEiJ_G0021544	Lsg1	95	64.025	Mus_spretus
ENSACAG00000004222	LSG1	99	64.241	ENSMPUG00000003734	LSG1	95	65.032	Mustela_putorius_furo
ENSACAG00000004222	LSG1	99	64.070	ENSMLUG00000012548	LSG1	95	65.397	Myotis_lucifugus
ENSACAG00000004222	LSG1	99	63.259	ENSNGAG00000021872	Lsg1	94	63.403	Nannospalax_galili
ENSACAG00000004222	LSG1	99	64.184	ENSNLEG00000008293	LSG1	95	64.873	Nomascus_leucogenys
ENSACAG00000004222	LSG1	73	68.041	ENSMEUG00000009041	-	84	68.041	Notamacropus_eugenii
ENSACAG00000004222	LSG1	100	61.406	ENSONIG00000002635	lsg1	95	61.575	Oreochromis_niloticus
ENSACAG00000004222	LSG1	100	65.079	ENSOANG00000012742	LSG1	99	65.183	Ornithorhynchus_anatinus
ENSACAG00000004222	LSG1	99	64.184	ENSOCUG00000004817	LSG1	95	64.455	Oryctolagus_cuniculus
ENSACAG00000004222	LSG1	100	60.863	ENSORLG00000007695	lsg1	95	60.897	Oryzias_latipes
ENSACAG00000004222	LSG1	100	61.404	ENSORLG00020016286	lsg1	95	61.440	Oryzias_latipes_hni
ENSACAG00000004222	LSG1	100	60.703	ENSORLG00015012025	lsg1	95	61.218	Oryzias_latipes_hsok
ENSACAG00000004222	LSG1	100	59.936	ENSOMEG00000022379	lsg1	95	59.744	Oryzias_melastigma
ENSACAG00000004222	LSG1	99	64.409	ENSOGAG00000003475	LSG1	95	64.937	Otolemur_garnettii
ENSACAG00000004222	LSG1	99	64.650	ENSOARG00000020403	LSG1	95	65.605	Ovis_aries
ENSACAG00000004222	LSG1	99	65.610	ENSPPAG00000029271	LSG1	95	65.452	Pan_paniscus
ENSACAG00000004222	LSG1	99	63.579	ENSPPRG00000010281	LSG1	95	64.050	Panthera_pardus
ENSACAG00000004222	LSG1	99	64.127	ENSPTIG00000010789	LSG1	95	64.603	Panthera_tigris_altaica
ENSACAG00000004222	LSG1	99	65.452	ENSPTRG00000015760	LSG1	95	65.293	Pan_troglodytes
ENSACAG00000004222	LSG1	99	64.342	ENSPANG00000018249	LSG1	95	63.133	Papio_anubis
ENSACAG00000004222	LSG1	99	60.450	ENSPKIG00000002895	lsg1	95	61.637	Paramormyrops_kingsleyae
ENSACAG00000004222	LSG1	100	65.008	ENSPSIG00000009821	LSG1	99	64.541	Pelodiscus_sinensis
ENSACAG00000004222	LSG1	100	61.173	ENSPMGG00000000931	lsg1	100	60.731	Periophthalmus_magnuspinnatus
ENSACAG00000004222	LSG1	99	65.869	ENSPEMG00000012082	-	95	65.710	Peromyscus_maniculatus_bairdii
ENSACAG00000004222	LSG1	99	60.563	ENSPMAG00000007451	lsg1	95	60.563	Petromyzon_marinus
ENSACAG00000004222	LSG1	100	63.554	ENSPCIG00000013890	LSG1	78	63.844	Phascolarctos_cinereus
ENSACAG00000004222	LSG1	99	61.270	ENSPFOG00000021882	lsg1	94	61.958	Poecilia_formosa
ENSACAG00000004222	LSG1	99	61.254	ENSPLAG00000019536	lsg1	94	61.156	Poecilia_latipinna
ENSACAG00000004222	LSG1	99	60.443	ENSPMEG00000017281	lsg1	94	61.120	Poecilia_mexicana
ENSACAG00000004222	LSG1	99	52.291	ENSPREG00000006048	lsg1	94	51.501	Poecilia_reticulata
ENSACAG00000004222	LSG1	91	65.917	ENSPPYG00000014425	LSG1	95	65.917	Pongo_abelii
ENSACAG00000004222	LSG1	89	85.714	ENSPCAG00000005511	LSG1	84	85.714	Procavia_capensis
ENSACAG00000004222	LSG1	99	63.391	ENSPCOG00000012360	LSG1	95	64.082	Propithecus_coquereli
ENSACAG00000004222	LSG1	100	60.436	ENSPNYG00000021994	lsg1	95	60.597	Pundamilia_nyererei
ENSACAG00000004222	LSG1	100	62.145	ENSPNAG00000015533	lsg1	95	62.184	Pygocentrus_nattereri
ENSACAG00000004222	LSG1	99	65.016	ENSRNOG00000001727	Lsg1	95	65.016	Rattus_norvegicus
ENSACAG00000004222	LSG1	99	64.172	ENSRBIG00000029053	LSG1	95	64.388	Rhinopithecus_bieti
ENSACAG00000004222	LSG1	99	64.172	ENSRROG00000037702	LSG1	95	64.388	Rhinopithecus_roxellana
ENSACAG00000004222	LSG1	60	56.886	YGL099W	LSG1	70	39.306	Saccharomyces_cerevisiae
ENSACAG00000004222	LSG1	99	65.183	ENSSBOG00000034938	LSG1	95	65.714	Saimiri_boliviensis_boliviensis
ENSACAG00000004222	LSG1	82	60.935	ENSSHAG00000003487	LSG1	100	60.595	Sarcophilus_harrisii
ENSACAG00000004222	LSG1	100	61.965	ENSSFOG00015008955	lsg1	95	62.500	Scleropages_formosus
ENSACAG00000004222	LSG1	100	62.758	ENSSDUG00000004622	lsg1	95	61.807	Seriola_dumerili
ENSACAG00000004222	LSG1	100	62.400	ENSSLDG00000010869	lsg1	95	61.600	Seriola_lalandi_dorsalis
ENSACAG00000004222	LSG1	74	75.652	ENSSARG00000012981	LSG1	72	75.652	Sorex_araneus
ENSACAG00000004222	LSG1	100	66.041	ENSSPUG00000016347	LSG1	95	65.934	Sphenodon_punctatus
ENSACAG00000004222	LSG1	100	61.182	ENSSPAG00000005508	lsg1	95	62.222	Stegastes_partitus
ENSACAG00000004222	LSG1	99	62.162	ENSSSCG00000011827	LSG1	95	62.957	Sus_scrofa
ENSACAG00000004222	LSG1	93	61.881	ENSTGUG00000009068	LSG1	99	62.211	Taeniopygia_guttata
ENSACAG00000004222	LSG1	100	57.760	ENSTRUG00000017380	lsg1	95	56.960	Takifugu_rubripes
ENSACAG00000004222	LSG1	100	61.514	ENSTNIG00000015570	lsg1	95	61.722	Tetraodon_nigroviridis
ENSACAG00000004222	LSG1	90	67.843	ENSTTRG00000000559	LSG1	86	67.843	Tursiops_truncatus
ENSACAG00000004222	LSG1	99	64.557	ENSUAMG00000012454	LSG1	95	65.665	Ursus_americanus
ENSACAG00000004222	LSG1	99	64.557	ENSUMAG00000000855	LSG1	95	65.665	Ursus_maritimus
ENSACAG00000004222	LSG1	99	59.685	ENSVPAG00000012400	LSG1	99	59.685	Vicugna_pacos
ENSACAG00000004222	LSG1	99	62.580	ENSVVUG00000008956	LSG1	97	63.016	Vulpes_vulpes
ENSACAG00000004222	LSG1	100	62.500	ENSXETG00000003451	lsg1	95	63.005	Xenopus_tropicalis
ENSACAG00000004222	LSG1	99	61.146	ENSXCOG00000003239	lsg1	94	61.477	Xiphophorus_couchianus
ENSACAG00000004222	LSG1	99	60.252	ENSXMAG00000005536	lsg1	95	60.815	Xiphophorus_maculatus