EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000004409 (Gene tree)
Gene ID: 100565532
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 40482 bases
Position: chrGL343544.1:63494-103975
Accession: 100565532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000004405	MIF4G_like	PF09088.11	1.5e-36	1	1
ENSACAP00000004405	MIF4G_like_2	PF09090.11	3.8e-84	1	1
ENSACAP00000004405	MIF4G	PF02854.19	3.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000004505	NCBP1-201	7481	XM_003227887	ENSACAP00000004405	918 (aa)	XP_003227935	H9G962

Gene Model

Click here to download ENSACAG00000004409's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03013	RNA transport	KEGG
acs03015	mRNA surveillance pathway	KEGG
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000004409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000004409	NCBP1	87	87.141	ENSG00000136937	NCBP1	100	87.266	Homo_sapiens
ENSACAG00000004409	NCBP1	87	84.145	ENSAPOG00000008002	NCBP1	99	84.020	Acanthochromis_polyacanthus
ENSACAG00000004409	NCBP1	87	86.924	ENSAMEG00000004763	NCBP1	100	87.049	Ailuropoda_melanoleuca
ENSACAG00000004409	NCBP1	87	84.000	ENSACIG00000000274	NCBP1	99	83.875	Amphilophus_citrinellus
ENSACAG00000004409	NCBP1	87	84.270	ENSAOCG00000021148	NCBP1	99	84.145	Amphiprion_ocellaris
ENSACAG00000004409	NCBP1	87	84.270	ENSAPEG00000001701	NCBP1	99	84.145	Amphiprion_percula
ENSACAG00000004409	NCBP1	87	84.145	ENSATEG00000006929	NCBP1	99	84.020	Anabas_testudineus
ENSACAG00000004409	NCBP1	83	90.482	ENSAPLG00000016318	NCBP1	99	90.476	Anas_platyrhynchos
ENSACAG00000004409	NCBP1	87	85.393	ENSANAG00000025744	NCBP1	99	87.295	Aotus_nancymaae
ENSACAG00000004409	NCBP1	87	83.521	ENSACLG00000014812	NCBP1	99	83.396	Astatotilapia_calliptera
ENSACAG00000004409	NCBP1	87	82.419	ENSAMXG00000016364	NCBP1	99	82.250	Astyanax_mexicanus
ENSACAG00000004409	NCBP1	87	87.266	ENSBTAG00000009732	NCBP1	99	90.634	Bos_taurus
ENSACAG00000004409	NCBP1	87	34.428	WBGene00018156	ncbp-1	99	34.550	Caenorhabditis_elegans
ENSACAG00000004409	NCBP1	87	87.266	ENSCJAG00000010840	NCBP1	100	87.391	Callithrix_jacchus
ENSACAG00000004409	NCBP1	87	87.141	ENSCAFG00000002445	NCBP1	100	87.266	Canis_familiaris
ENSACAG00000004409	NCBP1	86	87.199	ENSCAFG00020017997	NCBP1	100	87.464	Canis_lupus_dingo
ENSACAG00000004409	NCBP1	87	87.016	ENSCHIG00000020139	NCBP1	100	87.141	Capra_hircus
ENSACAG00000004409	NCBP1	71	78.495	ENSCAPG00000014252	NCBP1	90	78.495	Cavia_aperea
ENSACAG00000004409	NCBP1	83	87.042	ENSCPOG00000012573	NCBP1	97	87.733	Cavia_porcellus
ENSACAG00000004409	NCBP1	87	87.141	ENSCCAG00000032297	NCBP1	100	87.266	Cebus_capucinus
ENSACAG00000004409	NCBP1	87	87.141	ENSCATG00000010052	NCBP1	100	87.266	Cercocebus_atys
ENSACAG00000004409	NCBP1	87	87.141	ENSCLAG00000014339	NCBP1	100	87.266	Chinchilla_lanigera
ENSACAG00000004409	NCBP1	87	87.141	ENSCSAG00000010929	NCBP1	100	87.266	Chlorocebus_sabaeus
ENSACAG00000004409	NCBP1	77	88.785	ENSCHOG00000010332	NCBP1	90	88.288	Choloepus_hoffmanni
ENSACAG00000004409	NCBP1	87	88.015	ENSCPBG00000024344	NCBP1	99	91.803	Chrysemys_picta_bellii
ENSACAG00000004409	NCBP1	86	53.875	ENSCING00000008990	-	99	53.152	Ciona_intestinalis
ENSACAG00000004409	NCBP1	86	53.598	ENSCSAVG00000005300	-	97	52.883	Ciona_savignyi
ENSACAG00000004409	NCBP1	87	87.141	ENSCANG00000036913	NCBP1	100	87.266	Colobus_angolensis_palliatus
ENSACAG00000004409	NCBP1	87	86.267	ENSCGRG00001015771	Ncbp1	100	86.392	Cricetulus_griseus_chok1gshd
ENSACAG00000004409	NCBP1	87	85.930	ENSCGRG00000010311	Ncbp1	100	86.473	Cricetulus_griseus_crigri
ENSACAG00000004409	NCBP1	87	83.521	ENSCSEG00000012377	NCBP1	99	83.000	Cynoglossus_semilaevis
ENSACAG00000004409	NCBP1	87	81.773	ENSCVAG00000008795	NCBP1	99	82.397	Cyprinodon_variegatus
ENSACAG00000004409	NCBP1	87	86.267	ENSDNOG00000006885	NCBP1	100	86.455	Dasypus_novemcinctus
ENSACAG00000004409	NCBP1	87	82.484	ENSDORG00000013652	Ncbp1	100	82.360	Dipodomys_ordii
ENSACAG00000004409	NCBP1	72	33.382	FBgn0038887	CG7907	87	33.382	Drosophila_melanogaster
ENSACAG00000004409	NCBP1	87	55.882	FBgn0022942	Cbp80	100	56.592	Drosophila_melanogaster
ENSACAG00000004409	NCBP1	78	81.663	ENSETEG00000009705	NCBP1	89	81.663	Echinops_telfairi
ENSACAG00000004409	NCBP1	87	72.603	ENSEBUG00000008386	NCBP1	100	72.603	Eptatretus_burgeri
ENSACAG00000004409	NCBP1	87	86.767	ENSEASG00005022795	NCBP1	100	86.891	Equus_asinus_asinus
ENSACAG00000004409	NCBP1	87	86.767	ENSECAG00000013847	NCBP1	100	86.891	Equus_caballus
ENSACAG00000004409	NCBP1	83	81.806	ENSEEUG00000015973	NCBP1	99	81.937	Erinaceus_europaeus
ENSACAG00000004409	NCBP1	87	82.125	ENSELUG00000022519	NCBP1	99	82.000	Esox_lucius
ENSACAG00000004409	NCBP1	87	87.016	ENSFCAG00000001206	NCBP1	100	87.141	Felis_catus
ENSACAG00000004409	NCBP1	86	91.793	ENSFALG00000001193	NCBP1	100	91.667	Ficedula_albicollis
ENSACAG00000004409	NCBP1	87	87.016	ENSFDAG00000010864	NCBP1	100	87.141	Fukomys_damarensis
ENSACAG00000004409	NCBP1	87	83.021	ENSFHEG00000000655	NCBP1	99	82.772	Fundulus_heteroclitus
ENSACAG00000004409	NCBP1	87	80.673	ENSGMOG00000008653	NCBP1	99	80.549	Gadus_morhua
ENSACAG00000004409	NCBP1	86	91.381	ENSGALG00000002087	NCBP1	100	91.034	Gallus_gallus
ENSACAG00000004409	NCBP1	87	83.271	ENSGAFG00000017787	NCBP1	99	83.146	Gambusia_affinis
ENSACAG00000004409	NCBP1	87	81.219	ENSGACG00000016772	NCBP1	99	80.946	Gasterosteus_aculeatus
ENSACAG00000004409	NCBP1	87	91.885	ENSGAGG00000019483	NCBP1	100	91.760	Gopherus_agassizii
ENSACAG00000004409	NCBP1	87	87.141	ENSGGOG00000001376	NCBP1	100	87.266	Gorilla_gorilla
ENSACAG00000004409	NCBP1	87	83.521	ENSHBUG00000020843	NCBP1	99	83.396	Haplochromis_burtoni
ENSACAG00000004409	NCBP1	87	76.214	ENSHGLG00000018112	-	100	76.214	Heterocephalus_glaber_female
ENSACAG00000004409	NCBP1	87	87.016	ENSHGLG00000001882	NCBP1	100	87.141	Heterocephalus_glaber_female
ENSACAG00000004409	NCBP1	87	75.965	ENSHGLG00100017373	-	100	75.965	Heterocephalus_glaber_male
ENSACAG00000004409	NCBP1	87	87.016	ENSHGLG00100013014	NCBP1	100	87.141	Heterocephalus_glaber_male
ENSACAG00000004409	NCBP1	69	72.598	ENSHCOG00000000204	NCBP1	87	75.712	Hippocampus_comes
ENSACAG00000004409	NCBP1	87	82.250	ENSIPUG00000007275	ncbp1	99	82.125	Ictalurus_punctatus
ENSACAG00000004409	NCBP1	87	87.141	ENSSTOG00000002695	NCBP1	100	87.266	Ictidomys_tridecemlineatus
ENSACAG00000004409	NCBP1	87	82.522	ENSKMAG00000003594	NCBP1	99	86.965	Kryptolebias_marmoratus
ENSACAG00000004409	NCBP1	87	81.773	ENSLBEG00000011661	NCBP1	99	81.650	Labrus_bergylta
ENSACAG00000004409	NCBP1	87	80.050	ENSLACG00000013955	NCBP1	100	80.050	Latimeria_chalumnae
ENSACAG00000004409	NCBP1	87	72.311	ENSLOCG00000009579	NCBP1	99	72.311	Lepisosteus_oculatus
ENSACAG00000004409	NCBP1	87	86.517	ENSLAFG00000005999	NCBP1	100	86.642	Loxodonta_africana
ENSACAG00000004409	NCBP1	87	87.141	ENSMFAG00000030994	NCBP1	100	87.266	Macaca_fascicularis
ENSACAG00000004409	NCBP1	86	87.199	ENSMMUG00000012281	NCBP1	99	87.798	Macaca_mulatta
ENSACAG00000004409	NCBP1	87	87.141	ENSMNEG00000042790	NCBP1	100	87.266	Macaca_nemestrina
ENSACAG00000004409	NCBP1	87	87.141	ENSMLEG00000030374	NCBP1	100	87.266	Mandrillus_leucophaeus
ENSACAG00000004409	NCBP1	87	83.895	ENSMAMG00000014806	NCBP1	99	83.777	Mastacembelus_armatus
ENSACAG00000004409	NCBP1	87	83.521	ENSMZEG00005003469	NCBP1	99	83.396	Maylandia_zebra
ENSACAG00000004409	NCBP1	85	82.285	ENSMZEG00005009290	-	99	82.157	Maylandia_zebra
ENSACAG00000004409	NCBP1	87	85.947	ENSMAUG00000020583	Ncbp1	99	86.073	Mesocricetus_auratus
ENSACAG00000004409	NCBP1	87	86.767	ENSMICG00000012682	NCBP1	100	86.891	Microcebus_murinus
ENSACAG00000004409	NCBP1	87	86.017	ENSMOCG00000015818	Ncbp1	100	86.142	Microtus_ochrogaster
ENSACAG00000004409	NCBP1	79	81.129	ENSMMOG00000002610	NCBP1	99	80.992	Mola_mola
ENSACAG00000004409	NCBP1	87	86.267	ENSMODG00000003202	NCBP1	99	86.392	Monodelphis_domestica
ENSACAG00000004409	NCBP1	87	83.146	ENSMALG00000003547	NCBP1	99	83.021	Monopterus_albus
ENSACAG00000004409	NCBP1	87	86.017	MGP_CAROLIEiJ_G0025982	Ncbp1	100	86.142	Mus_caroli
ENSACAG00000004409	NCBP1	87	86.017	ENSMUSG00000028330	Ncbp1	100	86.142	Mus_musculus
ENSACAG00000004409	NCBP1	87	86.392	MGP_PahariEiJ_G0028318	Ncbp1	100	86.517	Mus_pahari
ENSACAG00000004409	NCBP1	87	86.017	MGP_SPRETEiJ_G0026945	Ncbp1	100	86.142	Mus_spretus
ENSACAG00000004409	NCBP1	87	87.016	ENSMPUG00000006399	NCBP1	100	87.141	Mustela_putorius_furo
ENSACAG00000004409	NCBP1	86	86.312	ENSMLUG00000015201	NCBP1	99	86.439	Myotis_lucifugus
ENSACAG00000004409	NCBP1	87	86.142	ENSNGAG00000014101	Ncbp1	100	86.142	Nannospalax_galili
ENSACAG00000004409	NCBP1	64	88.546	ENSNBRG00000014674	NCBP1	94	88.546	Neolamprologus_brichardi
ENSACAG00000004409	NCBP1	87	87.141	ENSNLEG00000016909	NCBP1	100	87.266	Nomascus_leucogenys
ENSACAG00000004409	NCBP1	77	84.120	ENSMEUG00000010672	NCBP1	90	84.120	Notamacropus_eugenii
ENSACAG00000004409	NCBP1	74	80.699	ENSOPRG00000002144	-	88	80.865	Ochotona_princeps
ENSACAG00000004409	NCBP1	87	87.016	ENSODEG00000003232	NCBP1	100	87.141	Octodon_degus
ENSACAG00000004409	NCBP1	87	83.521	ENSONIG00000001502	NCBP1	99	83.396	Oreochromis_niloticus
ENSACAG00000004409	NCBP1	68	90.675	ENSOANG00000001918	NCBP1	99	90.675	Ornithorhynchus_anatinus
ENSACAG00000004409	NCBP1	85	86.387	ENSOCUG00000013853	NCBP1	97	86.514	Oryctolagus_cuniculus
ENSACAG00000004409	NCBP1	87	82.000	ENSORLG00000011008	NCBP1	99	82.000	Oryzias_latipes
ENSACAG00000004409	NCBP1	87	82.125	ENSORLG00020017455	NCBP1	99	82.125	Oryzias_latipes_hni
ENSACAG00000004409	NCBP1	87	82.125	ENSORLG00015012127	NCBP1	99	82.125	Oryzias_latipes_hsok
ENSACAG00000004409	NCBP1	87	82.500	ENSOMEG00000020698	NCBP1	99	82.500	Oryzias_melastigma
ENSACAG00000004409	NCBP1	87	86.800	ENSOGAG00000013888	NCBP1	100	86.924	Otolemur_garnettii
ENSACAG00000004409	NCBP1	87	87.016	ENSOARG00000011233	NCBP1	100	87.141	Ovis_aries
ENSACAG00000004409	NCBP1	87	87.141	ENSPPAG00000026462	NCBP1	100	87.266	Pan_paniscus
ENSACAG00000004409	NCBP1	87	87.141	ENSPPRG00000022574	NCBP1	100	87.266	Panthera_pardus
ENSACAG00000004409	NCBP1	87	87.141	ENSPTIG00000018507	NCBP1	100	87.266	Panthera_tigris_altaica
ENSACAG00000004409	NCBP1	87	87.141	ENSPTRG00000021167	NCBP1	100	87.266	Pan_troglodytes
ENSACAG00000004409	NCBP1	87	87.141	ENSPANG00000025591	NCBP1	100	87.266	Papio_anubis
ENSACAG00000004409	NCBP1	87	80.673	ENSPKIG00000015861	NCBP1	100	81.273	Paramormyrops_kingsleyae
ENSACAG00000004409	NCBP1	56	92.278	ENSPSIG00000009558	NCBP1	100	92.085	Pelodiscus_sinensis
ENSACAG00000004409	NCBP1	87	78.705	ENSPMGG00000020476	NCBP1	99	78.456	Periophthalmus_magnuspinnatus
ENSACAG00000004409	NCBP1	87	85.893	ENSPEMG00000020105	Ncbp1	100	86.017	Peromyscus_maniculatus_bairdii
ENSACAG00000004409	NCBP1	87	66.667	ENSPMAG00000005533	NCBP1	100	66.012	Petromyzon_marinus
ENSACAG00000004409	NCBP1	87	86.267	ENSPCIG00000015800	NCBP1	99	86.392	Phascolarctos_cinereus
ENSACAG00000004409	NCBP1	87	82.750	ENSPFOG00000004158	NCBP1	99	82.750	Poecilia_formosa
ENSACAG00000004409	NCBP1	87	83.146	ENSPLAG00000020002	NCBP1	99	83.021	Poecilia_latipinna
ENSACAG00000004409	NCBP1	87	83.146	ENSPMEG00000019821	NCBP1	99	83.021	Poecilia_mexicana
ENSACAG00000004409	NCBP1	87	82.750	ENSPREG00000006035	NCBP1	99	82.750	Poecilia_reticulata
ENSACAG00000004409	NCBP1	87	87.141	ENSPPYG00000019426	NCBP1	100	87.266	Pongo_abelii
ENSACAG00000004409	NCBP1	78	83.384	ENSPCAG00000009943	NCBP1	90	83.384	Procavia_capensis
ENSACAG00000004409	NCBP1	71	90.132	ENSPCOG00000020024	NCBP1	98	90.132	Propithecus_coquereli
ENSACAG00000004409	NCBP1	87	86.642	ENSPVAG00000005924	NCBP1	100	86.767	Pteropus_vampyrus
ENSACAG00000004409	NCBP1	79	81.981	ENSPNYG00000002140	NCBP1	99	81.843	Pundamilia_nyererei
ENSACAG00000004409	NCBP1	87	82.772	ENSPNAG00000027753	NCBP1	99	82.647	Pygocentrus_nattereri
ENSACAG00000004409	NCBP1	87	86.267	ENSRNOG00000023605	Ncbp1	100	86.392	Rattus_norvegicus
ENSACAG00000004409	NCBP1	87	87.141	ENSRBIG00000043175	NCBP1	100	87.266	Rhinopithecus_bieti
ENSACAG00000004409	NCBP1	87	87.141	ENSRROG00000029767	NCBP1	100	87.266	Rhinopithecus_roxellana
ENSACAG00000004409	NCBP1	87	87.141	ENSSBOG00000019378	NCBP1	100	87.266	Saimiri_boliviensis_boliviensis
ENSACAG00000004409	NCBP1	61	84.758	ENSSHAG00000015882	NCBP1	72	85.393	Sarcophilus_harrisii
ENSACAG00000004409	NCBP1	86	81.115	ENSSFOG00015001872	NCBP1	100	80.649	Scleropages_formosus
ENSACAG00000004409	NCBP1	87	82.772	ENSSMAG00000007463	NCBP1	99	82.647	Scophthalmus_maximus
ENSACAG00000004409	NCBP1	87	83.000	ENSSDUG00000007019	NCBP1	100	83.424	Seriola_dumerili
ENSACAG00000004409	NCBP1	87	83.396	ENSSLDG00000021924	NCBP1	99	83.271	Seriola_lalandi_dorsalis
ENSACAG00000004409	NCBP1	75	78.465	ENSSARG00000007274	NCBP1	87	78.678	Sorex_araneus
ENSACAG00000004409	NCBP1	87	83.396	ENSSPUG00000008609	NCBP1	100	83.416	Sphenodon_punctatus
ENSACAG00000004409	NCBP1	87	84.145	ENSSPAG00000012550	NCBP1	99	84.020	Stegastes_partitus
ENSACAG00000004409	NCBP1	87	87.016	ENSSSCG00000005366	NCBP1	100	87.141	Sus_scrofa
ENSACAG00000004409	NCBP1	87	87.141	ENSTGUG00000001472	NCBP1	100	87.016	Taeniopygia_guttata
ENSACAG00000004409	NCBP1	87	82.522	ENSTRUG00000005287	NCBP1	99	82.397	Takifugu_rubripes
ENSACAG00000004409	NCBP1	87	83.895	ENSTBEG00000004035	NCBP1	100	84.020	Tupaia_belangeri
ENSACAG00000004409	NCBP1	77	86.700	ENSTTRG00000000507	NCBP1	88	86.700	Tursiops_truncatus
ENSACAG00000004409	NCBP1	87	87.016	ENSUAMG00000005471	NCBP1	100	87.141	Ursus_americanus
ENSACAG00000004409	NCBP1	85	85.128	ENSUMAG00000011865	NCBP1	100	87.464	Ursus_maritimus
ENSACAG00000004409	NCBP1	87	83.271	ENSVPAG00000010537	NCBP1	100	83.396	Vicugna_pacos
ENSACAG00000004409	NCBP1	87	87.141	ENSVVUG00000019725	NCBP1	100	87.266	Vulpes_vulpes
ENSACAG00000004409	NCBP1	87	81.398	ENSXETG00000010179	ncbp1	100	81.398	Xenopus_tropicalis
ENSACAG00000004409	NCBP1	87	83.146	ENSXMAG00000018253	NCBP1	99	83.021	Xiphophorus_maculatus