EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000004537 (Gene tree)
Gene ID: 100562960
Gene Symbol: -
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 34638 bases
Position: chrGL343233.1:68493-103130
Accession: 100562960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000004422	AARP2CN	PF08142.12	1.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000004522	-	5605	XM_008115772	ENSACAP00000004422	1293 (aa)	XP_008113979	H9G969

Gene Model

Click here to download ENSACAG00000004537's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000004537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000004537	-	99	69.755	ENSG00000165733	BMS1	99	70.353	Homo_sapiens
ENSACAG00000004537	-	70	71.080	ENSAPOG00000002296	bms1	97	65.303	Acanthochromis_polyacanthus
ENSACAG00000004537	-	99	71.145	ENSAMEG00000016834	BMS1	99	70.859	Ailuropoda_melanoleuca
ENSACAG00000004537	-	78	79.404	ENSACIG00000002588	bms1	89	76.368	Amphilophus_citrinellus
ENSACAG00000004537	-	83	68.951	ENSAOCG00000018088	bms1	97	64.148	Amphiprion_ocellaris
ENSACAG00000004537	-	81	70.843	ENSAPEG00000014673	bms1	97	63.977	Amphiprion_percula
ENSACAG00000004537	-	89	67.311	ENSATEG00000023465	bms1	99	63.353	Anabas_testudineus
ENSACAG00000004537	-	96	74.720	ENSAPLG00000003759	BMS1	100	74.980	Anas_platyrhynchos
ENSACAG00000004537	-	99	69.330	ENSANAG00000023432	BMS1	99	69.243	Aotus_nancymaae
ENSACAG00000004537	-	87	69.614	ENSACLG00000001294	bms1	98	66.021	Astatotilapia_calliptera
ENSACAG00000004537	-	100	70.884	ENSBTAG00000012878	BMS1	100	70.696	Bos_taurus
ENSACAG00000004537	-	79	53.641	WBGene00022021	Y61A9LA.10	94	53.461	Caenorhabditis_elegans
ENSACAG00000004537	-	99	69.635	ENSCJAG00000021705	BMS1	99	69.739	Callithrix_jacchus
ENSACAG00000004537	-	100	70.970	ENSCAFG00000007114	BMS1	100	70.382	Canis_familiaris
ENSACAG00000004537	-	100	70.970	ENSCAFG00020025282	BMS1	100	70.382	Canis_lupus_dingo
ENSACAG00000004537	-	100	70.244	ENSCHIG00000023251	BMS1	100	70.814	Capra_hircus
ENSACAG00000004537	-	99	66.822	ENSCAPG00000008652	BMS1	99	64.421	Cavia_aperea
ENSACAG00000004537	-	99	70.325	ENSCPOG00000000502	BMS1	99	67.979	Cavia_porcellus
ENSACAG00000004537	-	99	57.187	ENSCCAG00000024969	-	99	56.825	Cebus_capucinus
ENSACAG00000004537	-	99	70.449	ENSCATG00000030625	-	99	70.467	Cercocebus_atys
ENSACAG00000004537	-	90	52.317	ENSCATG00000008695	-	97	52.438	Cercocebus_atys
ENSACAG00000004537	-	99	70.293	ENSCLAG00000002446	BMS1	99	69.031	Chinchilla_lanigera
ENSACAG00000004537	-	99	70.145	ENSCSAG00000011118	BMS1	99	70.146	Chlorocebus_sabaeus
ENSACAG00000004537	-	100	70.283	ENSCHOG00000011055	BMS1	100	69.755	Choloepus_hoffmanni
ENSACAG00000004537	-	99	78.311	ENSCPBG00000025581	BMS1	99	77.557	Chrysemys_picta_bellii
ENSACAG00000004537	-	78	61.353	ENSCING00000003181	-	99	61.353	Ciona_intestinalis
ENSACAG00000004537	-	67	56.468	ENSCSAVG00000004113	-	83	63.112	Ciona_savignyi
ENSACAG00000004537	-	99	71.155	ENSCANG00000011609	BMS1	99	70.467	Colobus_angolensis_palliatus
ENSACAG00000004537	-	99	69.901	ENSCGRG00001019461	Bms1	99	69.639	Cricetulus_griseus_chok1gshd
ENSACAG00000004537	-	99	69.901	ENSCGRG00000009016	Bms1	99	69.639	Cricetulus_griseus_crigri
ENSACAG00000004537	-	82	72.897	ENSCSEG00000002469	bms1	98	66.614	Cynoglossus_semilaevis
ENSACAG00000004537	-	80	75.000	ENSCVAG00000008371	bms1	99	65.385	Cyprinodon_variegatus
ENSACAG00000004537	-	100	70.183	ENSDNOG00000015761	BMS1	100	69.506	Dasypus_novemcinctus
ENSACAG00000004537	-	99	69.954	ENSDORG00000002982	Bms1	99	70.084	Dipodomys_ordii
ENSACAG00000004537	-	83	59.512	FBgn0036686	CG7728	96	54.088	Drosophila_melanogaster
ENSACAG00000004537	-	86	71.429	ENSETEG00000009554	BMS1	74	71.429	Echinops_telfairi
ENSACAG00000004537	-	100	70.299	ENSEASG00005006894	BMS1	100	70.651	Equus_asinus_asinus
ENSACAG00000004537	-	100	70.322	ENSECAG00000001358	BMS1	100	70.498	Equus_caballus
ENSACAG00000004537	-	86	73.103	ENSELUG00000001756	bms1	99	66.284	Esox_lucius
ENSACAG00000004537	-	100	70.761	ENSFCAG00000011220	BMS1	100	70.750	Felis_catus
ENSACAG00000004537	-	100	74.431	ENSFALG00000006882	BMS1	99	74.108	Ficedula_albicollis
ENSACAG00000004537	-	99	70.325	ENSFDAG00000001422	BMS1	99	68.356	Fukomys_damarensis
ENSACAG00000004537	-	85	68.831	ENSFHEG00000003367	bms1	99	66.038	Fundulus_heteroclitus
ENSACAG00000004537	-	94	63.372	ENSGMOG00000000718	bms1	88	72.573	Gadus_morhua
ENSACAG00000004537	-	100	74.676	ENSGALG00000002624	BMS1	99	74.619	Gallus_gallus
ENSACAG00000004537	-	99	57.788	ENSGACG00000015334	bms1	88	65.920	Gasterosteus_aculeatus
ENSACAG00000004537	-	100	76.095	ENSGAGG00000003467	BMS1	100	76.089	Gopherus_agassizii
ENSACAG00000004537	-	87	69.614	ENSHBUG00000022628	bms1	98	66.021	Haplochromis_burtoni
ENSACAG00000004537	-	99	69.985	ENSHGLG00000000477	BMS1	99	68.192	Heterocephalus_glaber_female
ENSACAG00000004537	-	99	69.985	ENSHGLG00100002176	BMS1	99	68.558	Heterocephalus_glaber_male
ENSACAG00000004537	-	88	68.395	ENSHCOG00000017604	bms1	99	66.927	Hippocampus_comes
ENSACAG00000004537	-	52	65.140	ENSIPUG00000017855	bms1	93	71.783	Ictalurus_punctatus
ENSACAG00000004537	-	99	70.588	ENSSTOG00000015063	BMS1	99	70.666	Ictidomys_tridecemlineatus
ENSACAG00000004537	-	99	70.470	ENSJJAG00000017328	Bms1	99	69.195	Jaculus_jaculus
ENSACAG00000004537	-	57	65.672	ENSKMAG00000021982	bms1	96	64.860	Kryptolebias_marmoratus
ENSACAG00000004537	-	81	70.208	ENSLBEG00000028208	bms1	99	63.703	Labrus_bergylta
ENSACAG00000004537	-	99	62.576	ENSLACG00000001600	BMS1	100	62.642	Latimeria_chalumnae
ENSACAG00000004537	-	83	75.166	ENSLOCG00000012914	bms1	98	68.381	Lepisosteus_oculatus
ENSACAG00000004537	-	99	70.262	ENSLAFG00000006250	BMS1	99	69.545	Loxodonta_africana
ENSACAG00000004537	-	81	76.879	ENSMFAG00000037771	BMS1	97	75.526	Macaca_fascicularis
ENSACAG00000004537	-	90	60.302	ENSMMUG00000007426	-	99	60.135	Macaca_mulatta
ENSACAG00000004537	-	89	53.333	ENSMLEG00000029084	-	100	53.265	Mandrillus_leucophaeus
ENSACAG00000004537	-	87	67.742	ENSMAMG00000020855	bms1	99	63.001	Mastacembelus_armatus
ENSACAG00000004537	-	87	69.614	ENSMZEG00005005663	bms1	98	66.021	Maylandia_zebra
ENSACAG00000004537	-	96	73.285	ENSMGAG00000001170	BMS1	99	73.917	Meleagris_gallopavo
ENSACAG00000004537	-	99	70.737	ENSMAUG00000002195	Bms1	99	69.669	Mesocricetus_auratus
ENSACAG00000004537	-	100	69.341	ENSMICG00000009977	BMS1	100	69.725	Microcebus_murinus
ENSACAG00000004537	-	99	69.361	ENSMOCG00000002038	Bms1	99	68.947	Microtus_ochrogaster
ENSACAG00000004537	-	86	66.507	ENSMMOG00000000977	bms1	95	66.506	Mola_mola
ENSACAG00000004537	-	99	73.435	ENSMODG00000001177	BMS1	99	73.186	Monodelphis_domestica
ENSACAG00000004537	-	90	68.226	ENSMALG00000009680	bms1	99	65.458	Monopterus_albus
ENSACAG00000004537	-	72	84.951	MGP_CAROLIEiJ_G0028785	-	80	84.951	Mus_caroli
ENSACAG00000004537	-	99	70.115	ENSMUSG00000030138	Bms1	99	69.609	Mus_musculus
ENSACAG00000004537	-	99	69.555	MGP_PahariEiJ_G0022539	Bms1	99	69.367	Mus_pahari
ENSACAG00000004537	-	99	69.992	MGP_SPRETEiJ_G0029816	Bms1	99	69.438	Mus_spretus
ENSACAG00000004537	-	100	71.801	ENSMPUG00000017276	BMS1	100	70.475	Mustela_putorius_furo
ENSACAG00000004537	-	100	70.597	ENSMLUG00000003260	BMS1	100	69.739	Myotis_lucifugus
ENSACAG00000004537	-	87	70.097	ENSNGAG00000015258	Bms1	93	69.517	Nannospalax_galili
ENSACAG00000004537	-	99	68.241	ENSNLEG00000015791	BMS1	99	68.196	Nomascus_leucogenys
ENSACAG00000004537	-	80	82.979	ENSOPRG00000005195	BMS1	81	82.979	Ochotona_princeps
ENSACAG00000004537	-	99	70.385	ENSODEG00000005554	BMS1	99	69.091	Octodon_degus
ENSACAG00000004537	-	89	68.710	ENSONIG00000007227	bms1	98	64.425	Oreochromis_niloticus
ENSACAG00000004537	-	100	71.911	ENSOANG00000000662	-	100	71.374	Ornithorhynchus_anatinus
ENSACAG00000004537	-	99	70.336	ENSOCUG00000005354	BMS1	99	70.453	Oryctolagus_cuniculus
ENSACAG00000004537	-	82	72.222	ENSORLG00000014655	bms1	99	64.552	Oryzias_latipes
ENSACAG00000004537	-	82	72.851	ENSORLG00020016246	bms1	82	64.232	Oryzias_latipes_hni
ENSACAG00000004537	-	82	72.062	ENSORLG00015014183	bms1	98	64.060	Oryzias_latipes_hsok
ENSACAG00000004537	-	82	73.182	ENSOMEG00000015042	bms1	99	64.645	Oryzias_melastigma
ENSACAG00000004537	-	99	71.014	ENSOGAG00000006511	BMS1	99	70.122	Otolemur_garnettii
ENSACAG00000004537	-	100	70.534	ENSOARG00000003900	BMS1	100	70.521	Ovis_aries
ENSACAG00000004537	-	99	66.488	ENSPPAG00000027837	BMS1	99	66.769	Pan_paniscus
ENSACAG00000004537	-	100	70.836	ENSPPRG00000001311	BMS1	100	70.674	Panthera_pardus
ENSACAG00000004537	-	100	69.329	ENSPTIG00000009652	BMS1	100	69.272	Panthera_tigris_altaica
ENSACAG00000004537	-	99	69.985	ENSPTRG00000002441	BMS1	99	70.276	Pan_troglodytes
ENSACAG00000004537	-	100	76.274	ENSPSIG00000006481	BMS1	99	76.982	Pelodiscus_sinensis
ENSACAG00000004537	-	99	63.784	ENSPEMG00000022467	Bms1	99	63.356	Peromyscus_maniculatus_bairdii
ENSACAG00000004537	-	90	82.451	ENSPCIG00000001339	BMS1	99	82.222	Phascolarctos_cinereus
ENSACAG00000004537	-	85	68.174	ENSPFOG00000015180	bms1	99	64.448	Poecilia_formosa
ENSACAG00000004537	-	85	68.720	ENSPMEG00000023176	bms1	94	65.524	Poecilia_mexicana
ENSACAG00000004537	-	79	74.074	ENSPREG00000002695	bms1	99	64.751	Poecilia_reticulata
ENSACAG00000004537	-	61	64.831	ENSPPYG00000002836	-	99	65.195	Pongo_abelii
ENSACAG00000004537	-	68	85.034	ENSPCAG00000014528	BMS1	70	75.142	Procavia_capensis
ENSACAG00000004537	-	95	66.719	ENSPCOG00000023834	-	61	64.391	Propithecus_coquereli
ENSACAG00000004537	-	100	69.716	ENSPVAG00000000725	BMS1	100	69.148	Pteropus_vampyrus
ENSACAG00000004537	-	88	68.631	ENSPNYG00000018866	bms1	96	65.476	Pundamilia_nyererei
ENSACAG00000004537	-	82	67.007	ENSRNOG00000006576	Bms1	100	67.985	Rattus_norvegicus
ENSACAG00000004537	-	99	69.166	ENSRROG00000040101	BMS1	99	69.296	Rhinopithecus_roxellana
ENSACAG00000004537	-	70	47.598	YPL217C	-	80	47.380	Saccharomyces_cerevisiae
ENSACAG00000004537	-	99	69.924	ENSSBOG00000035778	BMS1	99	70.231	Saimiri_boliviensis_boliviensis
ENSACAG00000004537	-	99	71.061	ENSSHAG00000005062	BMS1	99	71.126	Sarcophilus_harrisii
ENSACAG00000004537	-	81	72.082	ENSSMAG00000019966	bms1	97	64.444	Scophthalmus_maximus
ENSACAG00000004537	-	89	68.618	ENSSDUG00000016875	bms1	96	65.120	Seriola_dumerili
ENSACAG00000004537	-	89	68.943	ENSSLDG00000015199	bms1	53	66.018	Seriola_lalandi_dorsalis
ENSACAG00000004537	-	70	59.542	ENSSARG00000014407	BMS1	100	58.900	Sorex_araneus
ENSACAG00000004537	-	100	76.748	ENSSPUG00000014454	BMS1	100	77.294	Sphenodon_punctatus
ENSACAG00000004537	-	99	71.582	ENSSSCG00000010198	BMS1	99	71.352	Sus_scrofa
ENSACAG00000004537	-	99	74.088	ENSTGUG00000006302	-	99	73.419	Taeniopygia_guttata
ENSACAG00000004537	-	86	64.766	ENSTRUG00000008028	bms1	99	62.571	Takifugu_rubripes
ENSACAG00000004537	-	99	57.242	ENSTNIG00000006216	bms1	89	62.264	Tetraodon_nigroviridis
ENSACAG00000004537	-	60	78.188	ENSTBEG00000001673	-	63	77.474	Tupaia_belangeri
ENSACAG00000004537	-	100	71.462	ENSUAMG00000023996	BMS1	100	70.837	Ursus_americanus
ENSACAG00000004537	-	100	71.308	ENSUMAG00000016523	BMS1	100	70.683	Ursus_maritimus
ENSACAG00000004537	-	84	78.378	ENSVPAG00000007477	BMS1	93	81.027	Vicugna_pacos
ENSACAG00000004537	-	100	71.264	ENSVVUG00000021305	BMS1	100	70.444	Vulpes_vulpes
ENSACAG00000004537	-	98	65.601	ENSXETG00000008158	bms1	99	66.283	Xenopus_tropicalis
ENSACAG00000004537	-	85	67.690	ENSXCOG00000000506	bms1	96	75.550	Xiphophorus_couchianus
ENSACAG00000004537	-	85	67.851	ENSXMAG00000014236	bms1	99	65.201	Xiphophorus_maculatus