EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000004607 (Gene tree)
Gene ID: 100556365
Gene Symbol: -
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 53177 bases
Position: chr1:123366738-123419914
Accession: 100556365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000004598	KH_1	PF00013.29	9.9e-56	1	3
ENSACAP00000004598	KH_1	PF00013.29	9.9e-56	2	3
ENSACAP00000004598	KH_1	PF00013.29	9.9e-56	3	3
ENSACAP00000004598	KH_2	PF07650.17	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000004704	-	1089	XM_003215204	ENSACAP00000004598	362 (aa)	XP_003215252	G1KD34

Gene Model

Click here to download ENSACAG00000004607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000004607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000004607	-	97	58.120	ENSACAG00000011701	PCBP4	75	58.120
ENSACAG00000004607	-	70	52.000	ENSACAG00000001479	HNRNPK	59	52.000
ENSACAG00000004607	-	95	35.036	ENSACAG00000006199	IGF2BP1	59	35.036
ENSACAG00000004607	-	59	37.143	ENSACAG00000015398	KHSRP	59	37.143
ENSACAG00000004607	-	99	72.299	ENSACAG00000000783	PCBP2	99	72.299
ENSACAG00000004607	-	99	84.211	ENSACAG00000009819	-	99	84.211
ENSACAG00000004607	-	63	42.254	ENSACAG00000000477	NOVA1	59	42.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000004607	-	99	84.314	ENSAPOG00000016582	-	98	84.314	Acanthochromis_polyacanthus
ENSACAG00000004607	-	98	80.899	ENSAPOG00000020003	pcbp3	87	80.899	Acanthochromis_polyacanthus
ENSACAG00000004607	-	100	88.674	ENSAMEG00000001697	-	100	85.753	Ailuropoda_melanoleuca
ENSACAG00000004607	-	99	84.594	ENSACIG00000002739	-	98	84.594	Amphilophus_citrinellus
ENSACAG00000004607	-	96	88.184	ENSACIG00000010933	pcbp3	93	88.184	Amphilophus_citrinellus
ENSACAG00000004607	-	96	84.682	ENSAOCG00000008592	-	96	84.682	Amphiprion_ocellaris
ENSACAG00000004607	-	96	84.568	ENSAOCG00000007806	-	100	84.568	Amphiprion_ocellaris
ENSACAG00000004607	-	99	84.314	ENSAPEG00000005209	-	98	84.314	Amphiprion_percula
ENSACAG00000004607	-	96	91.066	ENSAPEG00000008011	pcbp3	93	91.066	Amphiprion_percula
ENSACAG00000004607	-	96	88.728	ENSATEG00000015787	-	98	88.728	Anabas_testudineus
ENSACAG00000004607	-	99	83.754	ENSATEG00000009833	-	98	83.754	Anabas_testudineus
ENSACAG00000004607	-	100	88.674	ENSAPLG00000002975	-	100	88.674	Anas_platyrhynchos
ENSACAG00000004607	-	97	78.191	ENSAPLG00000008951	-	80	78.191	Anas_platyrhynchos
ENSACAG00000004607	-	96	92.883	ENSANAG00000030702	-	100	92.883	Aotus_nancymaae
ENSACAG00000004607	-	99	85.434	ENSACLG00000003801	-	98	85.434	Astatotilapia_calliptera
ENSACAG00000004607	-	96	90.778	ENSACLG00000011835	pcbp3	93	90.778	Astatotilapia_calliptera
ENSACAG00000004607	-	96	80.925	ENSAMXG00000013588	-	98	80.925	Astyanax_mexicanus
ENSACAG00000004607	-	96	91.931	ENSAMXG00000003440	pcbp3	93	91.931	Astyanax_mexicanus
ENSACAG00000004607	-	97	62.634	ENSAMXG00000001760	zgc:110045	73	62.634	Astyanax_mexicanus
ENSACAG00000004607	-	94	89.494	ENSCAFG00020019472	-	83	89.494	Canis_lupus_dingo
ENSACAG00000004607	-	100	87.017	ENSCSAG00000007440	-	91	87.017	Chlorocebus_sabaeus
ENSACAG00000004607	-	97	89.302	ENSCPBG00000000733	-	69	89.302	Chrysemys_picta_bellii
ENSACAG00000004607	-	100	89.503	ENSCPBG00000012151	-	100	89.503	Chrysemys_picta_bellii
ENSACAG00000004607	-	77	95.187	ENSCSEG00000016984	-	98	73.098	Cynoglossus_semilaevis
ENSACAG00000004607	-	96	81.214	ENSCSEG00000000822	pcbp3	87	94.787	Cynoglossus_semilaevis
ENSACAG00000004607	-	96	90.778	ENSCVAG00000014482	pcbp3	93	90.778	Cyprinodon_variegatus
ENSACAG00000004607	-	99	85.596	ENSCVAG00000005262	-	99	85.596	Cyprinodon_variegatus
ENSACAG00000004607	-	99	92.244	ENSDARG00000054378	pcbp3	99	92.244	Danio_rerio
ENSACAG00000004607	-	100	75.138	ENSETEG00000015988	-	100	75.138	Echinops_telfairi
ENSACAG00000004607	-	93	68.548	ENSEBUG00000005495	pcbp3	67	68.548	Eptatretus_burgeri
ENSACAG00000004607	-	96	64.907	ENSEBUG00000016192	pcbp3	99	64.952	Eptatretus_burgeri
ENSACAG00000004607	-	93	77.647	ENSEBUG00000007485	-	92	75.207	Eptatretus_burgeri
ENSACAG00000004607	-	98	83.799	ENSELUG00000001560	-	97	83.799	Esox_lucius
ENSACAG00000004607	-	96	91.618	ENSELUG00000003521	pcbp3	93	91.618	Esox_lucius
ENSACAG00000004607	-	100	87.293	ENSFALG00000003949	-	100	87.293	Ficedula_albicollis
ENSACAG00000004607	-	97	78.191	ENSFALG00000004411	-	75	78.191	Ficedula_albicollis
ENSACAG00000004607	-	96	81.948	ENSFHEG00000016615	pcbp3	94	81.948	Fundulus_heteroclitus
ENSACAG00000004607	-	99	83.657	ENSFHEG00000006539	-	99	83.657	Fundulus_heteroclitus
ENSACAG00000004607	-	96	73.803	ENSGMOG00000011992	pcbp3	95	73.803	Gadus_morhua
ENSACAG00000004607	-	96	67.529	ENSGMOG00000008611	-	99	67.529	Gadus_morhua
ENSACAG00000004607	-	99	83.056	ENSGALG00000013155	-	99	81.586	Gallus_gallus
ENSACAG00000004607	-	100	93.370	ENSGALG00000004394	-	100	93.370	Gallus_gallus
ENSACAG00000004607	-	96	85.303	ENSGAFG00000010274	-	93	85.303	Gambusia_affinis
ENSACAG00000004607	-	97	86.325	ENSGAFG00000011430	pcbp3	95	86.325	Gambusia_affinis
ENSACAG00000004607	-	99	80.392	ENSGACG00000014955	-	98	80.392	Gasterosteus_aculeatus
ENSACAG00000004607	-	99	85.237	ENSGACG00000002266	-	98	85.237	Gasterosteus_aculeatus
ENSACAG00000004607	-	91	81.579	ENSGAGG00000000271	-	100	79.032	Gopherus_agassizii
ENSACAG00000004607	-	83	91.284	ENSGAGG00000006956	-	88	91.284	Gopherus_agassizii
ENSACAG00000004607	-	99	85.434	ENSHBUG00000021782	-	98	85.434	Haplochromis_burtoni
ENSACAG00000004607	-	96	90.490	ENSHBUG00000010697	pcbp3	93	90.490	Haplochromis_burtoni
ENSACAG00000004607	-	99	82.073	ENSHCOG00000006067	-	98	82.073	Hippocampus_comes
ENSACAG00000004607	-	96	90.778	ENSHCOG00000017868	pcbp3	93	90.778	Hippocampus_comes
ENSACAG00000004607	-	99	92.244	ENSIPUG00000006238	pcbp3	99	92.244	Ictalurus_punctatus
ENSACAG00000004607	-	96	84.726	ENSKMAG00000018530	-	98	80.392	Kryptolebias_marmoratus
ENSACAG00000004607	-	96	91.066	ENSKMAG00000003046	pcbp3	93	91.066	Kryptolebias_marmoratus
ENSACAG00000004607	-	99	73.389	ENSLBEG00000006542	-	98	74.790	Labrus_bergylta
ENSACAG00000004607	-	98	81.356	ENSLBEG00000006201	pcbp3	96	81.356	Labrus_bergylta
ENSACAG00000004607	-	97	87.467	ENSLACG00000010386	pcbp3	75	87.467	Latimeria_chalumnae
ENSACAG00000004607	-	97	78.016	ENSLACG00000010804	zgc:110045	74	78.016	Latimeria_chalumnae
ENSACAG00000004607	-	100	92.541	ENSLOCG00000009369	pcbp3	100	92.541	Lepisosteus_oculatus
ENSACAG00000004607	-	97	82.906	ENSLOCG00000005058	zgc:110045	81	82.906	Lepisosteus_oculatus
ENSACAG00000004607	-	99	83.193	ENSMAMG00000011620	-	98	83.193	Mastacembelus_armatus
ENSACAG00000004607	-	96	81.662	ENSMAMG00000022336	pcbp3	92	81.662	Mastacembelus_armatus
ENSACAG00000004607	-	96	88.184	ENSMZEG00005008993	pcbp3	96	88.406	Maylandia_zebra
ENSACAG00000004607	-	99	81.994	ENSMZEG00005014882	-	98	82.143	Maylandia_zebra
ENSACAG00000004607	-	97	82.730	ENSMGAG00000001883	-	97	82.730	Meleagris_gallopavo
ENSACAG00000004607	-	97	78.457	ENSMGAG00000006794	-	75	78.457	Meleagris_gallopavo
ENSACAG00000004607	-	99	82.913	ENSMMOG00000005216	-	98	82.913	Mola_mola
ENSACAG00000004607	-	96	81.322	ENSMMOG00000000730	pcbp3	86	81.322	Mola_mola
ENSACAG00000004607	-	71	92.056	ENSMODG00000027884	-	93	92.056	Monodelphis_domestica
ENSACAG00000004607	-	95	88.986	ENSMALG00000000691	pcbp3	93	88.986	Monopterus_albus
ENSACAG00000004607	-	100	82.873	ENSMPUG00000001779	-	92	82.873	Mustela_putorius_furo
ENSACAG00000004607	-	96	87.896	ENSNBRG00000016409	-	93	87.896	Neolamprologus_brichardi
ENSACAG00000004607	-	99	81.717	ENSNBRG00000016714	-	100	81.868	Neolamprologus_brichardi
ENSACAG00000004607	-	97	91.429	ENSOPRG00000003431	-	100	91.429	Ochotona_princeps
ENSACAG00000004607	-	99	87.709	ENSONIG00000004611	-	98	87.709	Oreochromis_niloticus
ENSACAG00000004607	-	96	91.040	ENSONIG00000012122	-	96	91.040	Oreochromis_niloticus
ENSACAG00000004607	-	100	86.740	ENSOCUG00000002696	-	91	86.740	Oryctolagus_cuniculus
ENSACAG00000004607	-	96	84.682	ENSORLG00000000059	pcbp3	98	84.682	Oryzias_latipes
ENSACAG00000004607	-	99	85.714	ENSORLG00000022739	-	98	85.714	Oryzias_latipes
ENSACAG00000004607	-	99	85.434	ENSORLG00020006124	-	98	85.434	Oryzias_latipes_hni
ENSACAG00000004607	-	98	83.662	ENSORLG00020012671	pcbp3	97	83.662	Oryzias_latipes_hni
ENSACAG00000004607	-	98	83.662	ENSORLG00015000429	pcbp3	97	83.662	Oryzias_latipes_hsok
ENSACAG00000004607	-	98	84.463	ENSORLG00015008051	-	95	84.463	Oryzias_latipes_hsok
ENSACAG00000004607	-	96	81.381	ENSOMEG00000020811	pcbp3	99	81.381	Oryzias_melastigma
ENSACAG00000004607	-	99	85.434	ENSOMEG00000020162	-	98	85.434	Oryzias_melastigma
ENSACAG00000004607	-	100	86.757	ENSOGAG00000008044	-	100	86.757	Otolemur_garnettii
ENSACAG00000004607	-	85	79.535	ENSPKIG00000020913	-	93	79.535	Paramormyrops_kingsleyae
ENSACAG00000004607	-	99	84.314	ENSPKIG00000019329	pcbp3	98	84.314	Paramormyrops_kingsleyae
ENSACAG00000004607	-	93	81.579	ENSPSIG00000008350	-	68	81.579	Pelodiscus_sinensis
ENSACAG00000004607	-	100	80.663	ENSPSIG00000014970	-	100	81.215	Pelodiscus_sinensis
ENSACAG00000004607	-	95	91.014	ENSPMGG00000022383	pcbp3	93	91.014	Periophthalmus_magnuspinnatus
ENSACAG00000004607	-	79	89.119	ENSPMAG00000004637	-	100	89.119	Petromyzon_marinus
ENSACAG00000004607	-	98	66.106	ENSPMAG00000004551	pcbp3	91	66.106	Petromyzon_marinus
ENSACAG00000004607	-	100	94.199	ENSPCIG00000028092	-	100	94.199	Phascolarctos_cinereus
ENSACAG00000004607	-	99	84.314	ENSPLAG00000004074	-	91	84.314	Poecilia_latipinna
ENSACAG00000004607	-	97	86.236	ENSPLAG00000011449	pcbp3	87	86.236	Poecilia_latipinna
ENSACAG00000004607	-	95	90.517	ENSPMEG00000021239	pcbp3	93	90.517	Poecilia_mexicana
ENSACAG00000004607	-	100	84.848	ENSPMEG00000006653	-	100	85.124	Poecilia_mexicana
ENSACAG00000004607	-	99	83.754	ENSPREG00000020585	-	98	83.754	Poecilia_reticulata
ENSACAG00000004607	-	96	80.460	ENSPREG00000015736	pcbp3	97	80.460	Poecilia_reticulata
ENSACAG00000004607	-	99	83.193	ENSPNYG00000013205	-	98	83.193	Pundamilia_nyererei
ENSACAG00000004607	-	96	82.081	ENSPNYG00000012326	pcbp3	93	82.081	Pundamilia_nyererei
ENSACAG00000004607	-	99	85.873	ENSPNAG00000015104	pcbp3	99	85.873	Pygocentrus_nattereri
ENSACAG00000004607	-	96	89.655	ENSPNAG00000008541	-	93	89.655	Pygocentrus_nattereri
ENSACAG00000004607	-	100	87.293	ENSRNOG00000001245	Pcbp3	100	87.293	Rattus_norvegicus
ENSACAG00000004607	-	100	84.492	ENSRBIG00000028177	-	100	84.492	Rhinopithecus_bieti
ENSACAG00000004607	-	100	88.674	ENSSHAG00000007890	-	100	88.674	Sarcophilus_harrisii
ENSACAG00000004607	-	96	90.490	ENSSFOG00015014706	pcbp3	93	90.490	Scleropages_formosus
ENSACAG00000004607	-	96	90.173	ENSSFOG00015010205	pcbp3	98	90.173	Scleropages_formosus
ENSACAG00000004607	-	99	73.961	ENSSFOG00015007118	-	97	73.961	Scleropages_formosus
ENSACAG00000004607	-	96	82.370	ENSSMAG00000011929	pcbp3	95	82.370	Scophthalmus_maximus
ENSACAG00000004607	-	99	85.714	ENSSMAG00000003135	-	98	85.714	Scophthalmus_maximus
ENSACAG00000004607	-	96	88.728	ENSSDUG00000011608	pcbp3	97	88.728	Seriola_dumerili
ENSACAG00000004607	-	96	83.862	ENSSDUG00000008502	-	93	83.862	Seriola_dumerili
ENSACAG00000004607	-	96	85.591	ENSSLDG00000020161	-	93	85.591	Seriola_lalandi_dorsalis
ENSACAG00000004607	-	96	88.728	ENSSLDG00000008518	pcbp3	97	88.728	Seriola_lalandi_dorsalis
ENSACAG00000004607	-	93	82.524	ENSSPUG00000013214	-	94	82.028	Sphenodon_punctatus
ENSACAG00000004607	-	96	78.674	ENSSPAG00000023341	-	93	77.810	Stegastes_partitus
ENSACAG00000004607	-	96	84.877	ENSSPAG00000004190	-	100	84.877	Stegastes_partitus
ENSACAG00000004607	-	99	80.609	ENSTGUG00000008158	-	100	80.609	Taeniopygia_guttata
ENSACAG00000004607	-	100	86.188	ENSTGUG00000003316	-	100	86.188	Taeniopygia_guttata
ENSACAG00000004607	-	96	84.726	ENSTRUG00000013604	pcbp3	96	89.908	Takifugu_rubripes
ENSACAG00000004607	-	96	84.592	ENSTRUG00000006280	-	92	84.592	Takifugu_rubripes
ENSACAG00000004607	-	100	92.818	ENSTTRG00000015075	-	100	92.818	Tursiops_truncatus
ENSACAG00000004607	-	94	77.528	ENSXETG00000010491	pcbp2	74	77.528	Xenopus_tropicalis
ENSACAG00000004607	-	100	86.188	ENSXETG00000011483	pcbp1	100	86.188	Xenopus_tropicalis
ENSACAG00000004607	-	95	90.517	ENSXCOG00000020481	pcbp3	93	90.517	Xiphophorus_couchianus
ENSACAG00000004607	-	96	91.066	ENSXMAG00000008175	pcbp3	93	91.066	Xiphophorus_maculatus
ENSACAG00000004607	-	99	85.154	ENSXMAG00000028711	-	98	85.154	Xiphophorus_maculatus