EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000004612 (Gene tree)
Gene ID: 100560206
Gene Symbol: SMARCAL1
Alias: HARP|HHARP
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a like 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 50424 bases
Position: chrGL343674.1:25529-75952
Accession: 100560206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000004543	ResIII	PF04851.15	5.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000004648	SMARCAL1-201	4819	XM_008122294	ENSACAP00000004543	981 (aa)	XP_008120501	H9G9B7

Gene Model

Click here to download ENSACAG00000004612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000004612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000004612	SMARCAL1	99	54.254	ENSG00000138375	SMARCAL1	99	71.250	Homo_sapiens
ENSACAG00000004612	SMARCAL1	99	53.293	ENSAPOG00000020156	SMARCAL1	99	53.401	Acanthochromis_polyacanthus
ENSACAG00000004612	SMARCAL1	68	66.267	ENSACIG00000001500	smarcal1	85	66.267	Amphilophus_citrinellus
ENSACAG00000004612	SMARCAL1	97	54.048	ENSAOCG00000014266	SMARCAL1	98	54.048	Amphiprion_ocellaris
ENSACAG00000004612	SMARCAL1	93	60.465	ENSAPEG00000015861	SMARCAL1	99	60.465	Amphiprion_percula
ENSACAG00000004612	SMARCAL1	76	61.208	ENSATEG00000020624	SMARCAL1	81	61.208	Anabas_testudineus
ENSACAG00000004612	SMARCAL1	99	59.861	ENSAPLG00000009864	SMARCAL1	99	59.861	Anas_platyrhynchos
ENSACAG00000004612	SMARCAL1	71	65.483	ENSACLG00000015990	SMARCAL1	78	65.483	Astatotilapia_calliptera
ENSACAG00000004612	SMARCAL1	99	65.690	ENSAMXG00000003350	smarcal1	99	65.690	Astyanax_mexicanus
ENSACAG00000004612	SMARCAL1	97	73.940	ENSCPBG00000013599	SMARCAL1	100	73.940	Chrysemys_picta_bellii
ENSACAG00000004612	SMARCAL1	67	48.056	ENSCING00000009308	-	100	48.056	Ciona_intestinalis
ENSACAG00000004612	SMARCAL1	71	63.766	ENSCSEG00000010785	SMARCAL1	79	63.766	Cynoglossus_semilaevis
ENSACAG00000004612	SMARCAL1	99	52.174	ENSCVAG00000018780	SMARCAL1	100	52.222	Cyprinodon_variegatus
ENSACAG00000004612	SMARCAL1	54	53.296	ENSEBUG00000011906	SMARCAL1	73	53.296	Eptatretus_burgeri
ENSACAG00000004612	SMARCAL1	77	58.838	ENSELUG00000010440	-	80	77.419	Esox_lucius
ENSACAG00000004612	SMARCAL1	99	59.940	ENSFALG00000003981	SMARCAL1	99	59.960	Ficedula_albicollis
ENSACAG00000004612	SMARCAL1	99	61.080	ENSFHEG00000008380	SMARCAL1	100	51.116	Fundulus_heteroclitus
ENSACAG00000004612	SMARCAL1	99	60.500	ENSGALG00000011475	RPL37A	99	60.500	Gallus_gallus
ENSACAG00000004612	SMARCAL1	64	66.916	ENSGACG00000006073	SMARCAL1	100	68.715	Gasterosteus_aculeatus
ENSACAG00000004612	SMARCAL1	93	64.989	ENSGAGG00000015660	SMARCAL1	99	64.989	Gopherus_agassizii
ENSACAG00000004612	SMARCAL1	71	65.625	ENSHBUG00000002973	smarcal1	78	65.625	Haplochromis_burtoni
ENSACAG00000004612	SMARCAL1	95	63.718	ENSHCOG00000017921	smarcal1	98	63.528	Hippocampus_comes
ENSACAG00000004612	SMARCAL1	70	63.425	ENSKMAG00000012023	SMARCAL1	88	58.226	Kryptolebias_marmoratus
ENSACAG00000004612	SMARCAL1	91	54.939	ENSLBEG00000003493	smarcal1	99	54.939	Labrus_bergylta
ENSACAG00000004612	SMARCAL1	71	61.429	ENSLBEG00000022915	smarcal1	91	60.649	Labrus_bergylta
ENSACAG00000004612	SMARCAL1	84	77.143	ENSLACG00000010974	SMARCAL1	99	52.959	Latimeria_chalumnae
ENSACAG00000004612	SMARCAL1	78	75.000	ENSLOCG00000009637	smarcal1	99	55.799	Lepisosteus_oculatus
ENSACAG00000004612	SMARCAL1	97	62.550	ENSMAMG00000000828	SMARCAL1	98	62.550	Mastacembelus_armatus
ENSACAG00000004612	SMARCAL1	71	65.341	ENSMZEG00005007660	SMARCAL1	78	65.341	Maylandia_zebra
ENSACAG00000004612	SMARCAL1	99	59.540	ENSMGAG00000011658	SMARCAL1	99	59.661	Meleagris_gallopavo
ENSACAG00000004612	SMARCAL1	92	60.499	ENSMMOG00000003842	smarcal1	93	60.499	Mola_mola
ENSACAG00000004612	SMARCAL1	99	55.268	ENSMODG00000015544	SMARCAL1	99	55.268	Monodelphis_domestica
ENSACAG00000004612	SMARCAL1	67	66.466	ENSNBRG00000016273	smarcal1	86	66.466	Neolamprologus_brichardi
ENSACAG00000004612	SMARCAL1	65	70.283	ENSMEUG00000004395	SMARCAL1	74	69.325	Notamacropus_eugenii
ENSACAG00000004612	SMARCAL1	71	65.199	ENSONIG00000009036	smarcal1	100	65.066	Oreochromis_niloticus
ENSACAG00000004612	SMARCAL1	73	62.535	ENSORLG00000016455	SMARCAL1	79	62.535	Oryzias_latipes
ENSACAG00000004612	SMARCAL1	71	63.390	ENSORLG00020001610	SMARCAL1	78	63.390	Oryzias_latipes_hni
ENSACAG00000004612	SMARCAL1	71	63.533	ENSORLG00015001865	SMARCAL1	78	63.533	Oryzias_latipes_hsok
ENSACAG00000004612	SMARCAL1	74	61.186	ENSOMEG00000001845	smarcal1	85	61.186	Oryzias_melastigma
ENSACAG00000004612	SMARCAL1	77	59.109	ENSPMGG00000019092	SMARCAL1	85	59.109	Periophthalmus_magnuspinnatus
ENSACAG00000004612	SMARCAL1	99	52.772	ENSPCIG00000022514	SMARCAL1	99	54.060	Phascolarctos_cinereus
ENSACAG00000004612	SMARCAL1	82	62.155	ENSPFOG00000000560	SMARCAL1	100	52.429	Poecilia_formosa
ENSACAG00000004612	SMARCAL1	82	62.017	ENSPMEG00000018146	SMARCAL1	100	52.328	Poecilia_mexicana
ENSACAG00000004612	SMARCAL1	51	63.294	ENSPREG00000009591	SMARCAL1	78	69.374	Poecilia_reticulata
ENSACAG00000004612	SMARCAL1	86	64.295	ENSPNAG00000014900	smarcal1	88	64.295	Pygocentrus_nattereri
ENSACAG00000004612	SMARCAL1	77	77.778	ENSSHAG00000013538	SMARCAL1	83	77.778	Sarcophilus_harrisii
ENSACAG00000004612	SMARCAL1	76	60.643	ENSSMAG00000010427	SMARCAL1	81	60.643	Scophthalmus_maximus
ENSACAG00000004612	SMARCAL1	70	64.483	ENSSDUG00000017470	SMARCAL1	81	64.483	Seriola_dumerili
ENSACAG00000004612	SMARCAL1	73	62.204	ENSSLDG00000007224	SMARCAL1	100	62.204	Seriola_lalandi_dorsalis
ENSACAG00000004612	SMARCAL1	99	66.499	ENSSPUG00000015369	SMARCAL1	99	66.499	Sphenodon_punctatus
ENSACAG00000004612	SMARCAL1	69	64.349	ENSSPAG00000003742	smarcal1	90	62.376	Stegastes_partitus
ENSACAG00000004612	SMARCAL1	70	63.650	ENSSSCG00000035501	SMARCAL1	75	63.650	Sus_scrofa
ENSACAG00000004612	SMARCAL1	70	71.366	ENSTGUG00000005079	SMARCAL1	99	71.366	Taeniopygia_guttata
ENSACAG00000004612	SMARCAL1	74	56.011	ENSTRUG00000010701	SMARCAL1	83	56.148	Takifugu_rubripes
ENSACAG00000004612	SMARCAL1	99	47.944	ENSTTRG00000009001	SMARCAL1	99	48.144	Tursiops_truncatus
ENSACAG00000004612	SMARCAL1	99	58.475	ENSXETG00000000465	smarcal1	99	58.475	Xenopus_tropicalis