EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000004618 (Gene tree)
Gene ID: 100567006
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 13320 bases
Position: chr6:78366077-78379396
Accession: 100567006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000004505	AD	PF09793.9	1.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000004608	LSM12-201	3759	XM_003222646	ENSACAP00000004505	194 (aa)	XP_003222694	G1KD00

Gene Model

Click here to download ENSACAG00000004618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000004618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000004618	LSM12	99	93.782	ENSG00000161654	LSM12	99	93.782	Homo_sapiens
ENSACAG00000004618	LSM12	100	85.204	ENSAPOG00000007907	lsm12b	100	85.204	Acanthochromis_polyacanthus
ENSACAG00000004618	LSM12	99	91.837	ENSAMEG00000018321	LSM12	99	91.837	Ailuropoda_melanoleuca
ENSACAG00000004618	LSM12	100	83.163	ENSACIG00000008538	lsm12b	100	83.163	Amphilophus_citrinellus
ENSACAG00000004618	LSM12	100	84.694	ENSAOCG00000021847	lsm12b	88	84.694	Amphiprion_ocellaris
ENSACAG00000004618	LSM12	100	84.694	ENSAPEG00000002252	lsm12b	100	84.694	Amphiprion_percula
ENSACAG00000004618	LSM12	100	84.184	ENSATEG00000005705	lsm12b	100	84.184	Anabas_testudineus
ENSACAG00000004618	LSM12	99	93.782	ENSANAG00000029011	LSM12	99	93.782	Aotus_nancymaae
ENSACAG00000004618	LSM12	100	83.673	ENSACLG00000026332	lsm12b	100	83.673	Astatotilapia_calliptera
ENSACAG00000004618	LSM12	100	78.571	ENSAMXG00000036117	lsm12a	91	78.571	Astyanax_mexicanus
ENSACAG00000004618	LSM12	100	82.653	ENSAMXG00000032952	lsm12b	100	82.653	Astyanax_mexicanus
ENSACAG00000004618	LSM12	99	93.782	ENSBTAG00000016252	LSM12	99	93.782	Bos_taurus
ENSACAG00000004618	LSM12	99	93.782	ENSCJAG00000048480	LSM12	99	93.782	Callithrix_jacchus
ENSACAG00000004618	LSM12	99	93.782	ENSCAFG00000014379	LSM12	91	93.782	Canis_familiaris
ENSACAG00000004618	LSM12	99	93.782	ENSCAFG00020012173	LSM12	99	93.782	Canis_lupus_dingo
ENSACAG00000004618	LSM12	99	93.782	ENSCHIG00000018175	LSM12	99	93.782	Capra_hircus
ENSACAG00000004618	LSM12	99	93.782	ENSTSYG00000036361	LSM12	99	93.782	Carlito_syrichta
ENSACAG00000004618	LSM12	84	89.506	ENSCAPG00000009647	LSM12	89	89.506	Cavia_aperea
ENSACAG00000004618	LSM12	99	92.228	ENSCPOG00000012860	LSM12	99	92.228	Cavia_porcellus
ENSACAG00000004618	LSM12	99	93.782	ENSCCAG00000032905	LSM12	99	93.782	Cebus_capucinus
ENSACAG00000004618	LSM12	99	93.782	ENSCATG00000030577	-	99	93.782	Cercocebus_atys
ENSACAG00000004618	LSM12	99	93.264	ENSCLAG00000015759	LSM12	99	93.264	Chinchilla_lanigera
ENSACAG00000004618	LSM12	99	93.264	ENSCSAG00000003486	LSM12	99	93.264	Chlorocebus_sabaeus
ENSACAG00000004618	LSM12	56	90.826	ENSCHOG00000001198	LSM12	100	90.826	Choloepus_hoffmanni
ENSACAG00000004618	LSM12	100	93.814	ENSCPBG00000027105	LSM12	100	93.814	Chrysemys_picta_bellii
ENSACAG00000004618	LSM12	99	93.782	ENSCANG00000043328	LSM12	99	93.782	Colobus_angolensis_palliatus
ENSACAG00000004618	LSM12	99	93.782	ENSCGRG00001002094	Lsm12	99	93.782	Cricetulus_griseus_chok1gshd
ENSACAG00000004618	LSM12	79	94.156	ENSCGRG00000004316	Lsm12	87	94.156	Cricetulus_griseus_crigri
ENSACAG00000004618	LSM12	100	83.673	ENSCSEG00000008434	lsm12b	100	83.673	Cynoglossus_semilaevis
ENSACAG00000004618	LSM12	100	83.673	ENSCVAG00000008755	lsm12b	100	83.673	Cyprinodon_variegatus
ENSACAG00000004618	LSM12	100	77.041	ENSDARG00000028848	lsm12a	100	77.041	Danio_rerio
ENSACAG00000004618	LSM12	100	85.204	ENSDARG00000109510	lsm12b	100	85.204	Danio_rerio
ENSACAG00000004618	LSM12	99	94.301	ENSDNOG00000002418	LSM12	90	94.301	Dasypus_novemcinctus
ENSACAG00000004618	LSM12	99	93.782	ENSDORG00000016381	Lsm12	99	93.782	Dipodomys_ordii
ENSACAG00000004618	LSM12	84	33.133	FBgn0030364	Lsm12	78	34.682	Drosophila_melanogaster
ENSACAG00000004618	LSM12	78	30.909	FBgn0036057	CG14164	87	30.909	Drosophila_melanogaster
ENSACAG00000004618	LSM12	99	93.264	ENSETEG00000008374	LSM12	99	93.264	Echinops_telfairi
ENSACAG00000004618	LSM12	90	82.286	ENSETEG00000011012	-	100	82.286	Echinops_telfairi
ENSACAG00000004618	LSM12	85	63.030	ENSEBUG00000016299	lsm12a	92	63.030	Eptatretus_burgeri
ENSACAG00000004618	LSM12	99	93.782	ENSEASG00005010155	LSM12	99	93.782	Equus_asinus_asinus
ENSACAG00000004618	LSM12	99	93.782	ENSECAG00000009071	LSM12	99	93.782	Equus_caballus
ENSACAG00000004618	LSM12	79	94.118	ENSEEUG00000002419	-	100	94.118	Erinaceus_europaeus
ENSACAG00000004618	LSM12	100	83.163	ENSELUG00000015538	lsm12b	100	78.571	Esox_lucius
ENSACAG00000004618	LSM12	100	81.633	ENSELUG00000000256	-	100	81.633	Esox_lucius
ENSACAG00000004618	LSM12	99	93.782	ENSFCAG00000037021	LSM12	99	93.782	Felis_catus
ENSACAG00000004618	LSM12	76	93.919	ENSFDAG00000008954	LSM12	87	93.919	Fukomys_damarensis
ENSACAG00000004618	LSM12	100	82.653	ENSFHEG00000019913	lsm12b	100	82.653	Fundulus_heteroclitus
ENSACAG00000004618	LSM12	81	84.810	ENSGMOG00000015449	lsm12b	100	84.810	Gadus_morhua
ENSACAG00000004618	LSM12	79	96.732	ENSGALG00000039803	LSM12	100	96.732	Gallus_gallus
ENSACAG00000004618	LSM12	100	83.163	ENSGAFG00000011829	lsm12b	100	83.163	Gambusia_affinis
ENSACAG00000004618	LSM12	81	86.076	ENSGACG00000003428	lsm12b	100	86.076	Gasterosteus_aculeatus
ENSACAG00000004618	LSM12	100	94.845	ENSGAGG00000021965	LSM12	100	94.845	Gopherus_agassizii
ENSACAG00000004618	LSM12	99	93.782	ENSGGOG00000010589	-	99	93.782	Gorilla_gorilla
ENSACAG00000004618	LSM12	85	83.832	ENSHBUG00000007667	lsm12b	74	83.832	Haplochromis_burtoni
ENSACAG00000004618	LSM12	99	93.782	ENSHGLG00000011411	LSM12	99	93.782	Heterocephalus_glaber_female
ENSACAG00000004618	LSM12	91	82.873	ENSHGLG00100000241	LSM12	96	82.873	Heterocephalus_glaber_male
ENSACAG00000004618	LSM12	100	83.163	ENSHCOG00000002094	lsm12b	100	83.163	Hippocampus_comes
ENSACAG00000004618	LSM12	99	73.196	ENSIPUG00000008936	lsm12a	99	73.196	Ictalurus_punctatus
ENSACAG00000004618	LSM12	100	84.184	ENSIPUG00000014800	lsm12	100	84.184	Ictalurus_punctatus
ENSACAG00000004618	LSM12	99	93.782	ENSSTOG00000007403	LSM12	99	93.782	Ictidomys_tridecemlineatus
ENSACAG00000004618	LSM12	97	82.632	ENSJJAG00000011793	-	100	82.632	Jaculus_jaculus
ENSACAG00000004618	LSM12	99	92.746	ENSJJAG00000004364	-	99	92.746	Jaculus_jaculus
ENSACAG00000004618	LSM12	81	82.390	ENSJJAG00000014652	-	95	82.390	Jaculus_jaculus
ENSACAG00000004618	LSM12	85	85.030	ENSKMAG00000007704	lsm12b	56	85.030	Kryptolebias_marmoratus
ENSACAG00000004618	LSM12	100	84.694	ENSLBEG00000027999	lsm12b	100	84.694	Labrus_bergylta
ENSACAG00000004618	LSM12	100	89.175	ENSLACG00000015981	LSM12	100	89.175	Latimeria_chalumnae
ENSACAG00000004618	LSM12	100	82.653	ENSLOCG00000013079	lsm12b	99	82.653	Lepisosteus_oculatus
ENSACAG00000004618	LSM12	99	93.782	ENSLAFG00000005202	LSM12	99	93.782	Loxodonta_africana
ENSACAG00000004618	LSM12	99	93.782	ENSMFAG00000031376	LSM12	99	93.782	Macaca_fascicularis
ENSACAG00000004618	LSM12	65	78.161	ENSMMUG00000042106	-	100	78.161	Macaca_mulatta
ENSACAG00000004618	LSM12	65	78.161	ENSMMUG00000038408	-	100	78.161	Macaca_mulatta
ENSACAG00000004618	LSM12	99	93.782	ENSMMUG00000006804	LSM12	99	93.782	Macaca_mulatta
ENSACAG00000004618	LSM12	99	93.782	ENSMNEG00000030594	-	99	93.782	Macaca_nemestrina
ENSACAG00000004618	LSM12	99	93.782	ENSMLEG00000039934	LSM12	99	93.782	Mandrillus_leucophaeus
ENSACAG00000004618	LSM12	100	84.184	ENSMAMG00000004279	lsm12b	100	84.184	Mastacembelus_armatus
ENSACAG00000004618	LSM12	100	83.673	ENSMZEG00005005754	lsm12b	100	83.673	Maylandia_zebra
ENSACAG00000004618	LSM12	99	93.264	ENSMICG00000037219	LSM12	99	93.264	Microcebus_murinus
ENSACAG00000004618	LSM12	99	79.275	ENSMOCG00000017015	-	85	79.275	Microtus_ochrogaster
ENSACAG00000004618	LSM12	99	93.782	ENSMOCG00000019878	-	99	93.782	Microtus_ochrogaster
ENSACAG00000004618	LSM12	100	84.184	ENSMMOG00000020848	lsm12b	100	84.184	Mola_mola
ENSACAG00000004618	LSM12	99	84.896	ENSMALG00000007578	lsm12b	98	84.896	Monopterus_albus
ENSACAG00000004618	LSM12	99	93.264	MGP_CAROLIEiJ_G0017241	Lsm12	99	93.264	Mus_caroli
ENSACAG00000004618	LSM12	99	93.782	ENSMUSG00000020922	Lsm12	99	93.782	Mus_musculus
ENSACAG00000004618	LSM12	99	86.190	MGP_PahariEiJ_G0018371	Lsm12	99	86.190	Mus_pahari
ENSACAG00000004618	LSM12	99	93.264	MGP_SPRETEiJ_G0018084	Lsm12	99	93.264	Mus_spretus
ENSACAG00000004618	LSM12	99	93.264	ENSMLUG00000006391	LSM12	99	93.264	Myotis_lucifugus
ENSACAG00000004618	LSM12	98	63.636	ENSNGAG00000015429	-	98	63.636	Nannospalax_galili
ENSACAG00000004618	LSM12	99	93.782	ENSNGAG00000001870	Lsm12	99	93.782	Nannospalax_galili
ENSACAG00000004618	LSM12	100	83.673	ENSNBRG00000006266	lsm12b	100	83.673	Neolamprologus_brichardi
ENSACAG00000004618	LSM12	99	93.782	ENSNLEG00000005580	-	99	93.782	Nomascus_leucogenys
ENSACAG00000004618	LSM12	84	95.706	ENSMEUG00000007501	-	99	95.706	Notamacropus_eugenii
ENSACAG00000004618	LSM12	99	93.782	ENSOPRG00000008552	LSM12	99	93.782	Ochotona_princeps
ENSACAG00000004618	LSM12	100	83.590	ENSODEG00000007886	-	74	83.590	Octodon_degus
ENSACAG00000004618	LSM12	100	93.333	ENSODEG00000017998	-	100	93.333	Octodon_degus
ENSACAG00000004618	LSM12	100	83.673	ENSONIG00000007933	lsm12b	100	83.673	Oreochromis_niloticus
ENSACAG00000004618	LSM12	99	88.660	ENSOCUG00000027889	-	100	88.660	Oryctolagus_cuniculus
ENSACAG00000004618	LSM12	99	87.629	ENSOCUG00000021254	-	100	87.629	Oryctolagus_cuniculus
ENSACAG00000004618	LSM12	99	91.837	ENSOCUG00000008566	-	99	91.837	Oryctolagus_cuniculus
ENSACAG00000004618	LSM12	99	86.598	ENSOCUG00000024823	-	100	86.598	Oryctolagus_cuniculus
ENSACAG00000004618	LSM12	100	84.184	ENSORLG00000011310	lsm12b	100	84.184	Oryzias_latipes
ENSACAG00000004618	LSM12	100	84.184	ENSORLG00020002060	lsm12b	92	84.184	Oryzias_latipes_hni
ENSACAG00000004618	LSM12	100	84.184	ENSORLG00015001647	lsm12b	92	84.184	Oryzias_latipes_hsok
ENSACAG00000004618	LSM12	100	84.184	ENSOMEG00000006184	lsm12b	92	84.184	Oryzias_melastigma
ENSACAG00000004618	LSM12	99	93.264	ENSOGAG00000010489	LSM12	99	93.264	Otolemur_garnettii
ENSACAG00000004618	LSM12	99	90.452	ENSOARG00000006589	LSM12	99	90.452	Ovis_aries
ENSACAG00000004618	LSM12	99	83.938	ENSPPAG00000034974	-	92	91.743	Pan_paniscus
ENSACAG00000004618	LSM12	99	93.782	ENSPPRG00000023420	LSM12	99	93.782	Panthera_pardus
ENSACAG00000004618	LSM12	72	89.091	ENSPTIG00000014850	-	100	89.091	Panthera_tigris_altaica
ENSACAG00000004618	LSM12	79	94.118	ENSPTIG00000012704	-	82	94.118	Panthera_tigris_altaica
ENSACAG00000004618	LSM12	99	93.782	ENSPTRG00000009261	LSM12	99	93.782	Pan_troglodytes
ENSACAG00000004618	LSM12	99	93.782	ENSPANG00000021315	-	99	93.782	Papio_anubis
ENSACAG00000004618	LSM12	100	85.714	ENSPKIG00000021058	lsm12b	100	85.714	Paramormyrops_kingsleyae
ENSACAG00000004618	LSM12	99	76.562	ENSPKIG00000017932	-	98	76.562	Paramormyrops_kingsleyae
ENSACAG00000004618	LSM12	100	83.673	ENSPMGG00000021344	lsm12b	100	83.673	Periophthalmus_magnuspinnatus
ENSACAG00000004618	LSM12	99	93.782	ENSPEMG00000012199	Lsm12	99	93.782	Peromyscus_maniculatus_bairdii
ENSACAG00000004618	LSM12	89	65.896	ENSPMAG00000005461	lsm12a	99	65.896	Petromyzon_marinus
ENSACAG00000004618	LSM12	99	94.301	ENSPCIG00000020244	LSM12	99	94.301	Phascolarctos_cinereus
ENSACAG00000004618	LSM12	100	82.143	ENSPFOG00000015930	lsm12b	100	82.143	Poecilia_formosa
ENSACAG00000004618	LSM12	100	82.143	ENSPLAG00000021089	lsm12b	100	82.143	Poecilia_latipinna
ENSACAG00000004618	LSM12	100	82.143	ENSPMEG00000012961	lsm12b	100	82.143	Poecilia_mexicana
ENSACAG00000004618	LSM12	88	85.380	ENSPREG00000010236	lsm12b	95	85.380	Poecilia_reticulata
ENSACAG00000004618	LSM12	99	93.782	ENSPPYG00000008344	LSM12	99	93.782	Pongo_abelii
ENSACAG00000004618	LSM12	82	96.226	ENSPCAG00000008790	LSM12	100	96.226	Procavia_capensis
ENSACAG00000004618	LSM12	99	93.782	ENSPCOG00000027951	LSM12	99	93.782	Propithecus_coquereli
ENSACAG00000004618	LSM12	99	93.264	ENSPVAG00000013706	LSM12	99	93.264	Pteropus_vampyrus
ENSACAG00000004618	LSM12	100	83.673	ENSPNYG00000003386	lsm12b	100	83.673	Pundamilia_nyererei
ENSACAG00000004618	LSM12	100	82.143	ENSPNAG00000004186	lsm12b	100	82.143	Pygocentrus_nattereri
ENSACAG00000004618	LSM12	100	77.041	ENSPNAG00000018435	lsm12a	100	77.041	Pygocentrus_nattereri
ENSACAG00000004618	LSM12	99	93.782	ENSRNOG00000020894	Lsm12	99	93.782	Rattus_norvegicus
ENSACAG00000004618	LSM12	99	93.782	ENSRBIG00000027910	LSM12	99	93.782	Rhinopithecus_bieti
ENSACAG00000004618	LSM12	99	55.959	ENSRROG00000000537	-	98	55.959	Rhinopithecus_roxellana
ENSACAG00000004618	LSM12	99	93.782	ENSRROG00000045530	-	99	93.782	Rhinopithecus_roxellana
ENSACAG00000004618	LSM12	99	93.782	ENSSBOG00000025310	LSM12	99	93.782	Saimiri_boliviensis_boliviensis
ENSACAG00000004618	LSM12	81	93.038	ENSSHAG00000014914	LSM12	100	93.038	Sarcophilus_harrisii
ENSACAG00000004618	LSM12	100	84.694	ENSSFOG00015009612	lsm12	100	84.694	Scleropages_formosus
ENSACAG00000004618	LSM12	100	81.122	ENSSFOG00015020392	lsm12a	100	81.122	Scleropages_formosus
ENSACAG00000004618	LSM12	100	84.184	ENSSMAG00000008089	lsm12b	100	84.184	Scophthalmus_maximus
ENSACAG00000004618	LSM12	100	85.204	ENSSDUG00000012711	lsm12b	100	85.204	Seriola_dumerili
ENSACAG00000004618	LSM12	100	85.204	ENSSLDG00000007404	lsm12b	100	85.204	Seriola_lalandi_dorsalis
ENSACAG00000004618	LSM12	79	93.464	ENSSARG00000005537	LSM12	100	93.464	Sorex_araneus
ENSACAG00000004618	LSM12	100	95.876	ENSSPUG00000011984	LSM12	100	95.876	Sphenodon_punctatus
ENSACAG00000004618	LSM12	100	84.694	ENSSPAG00000017058	lsm12b	100	84.694	Stegastes_partitus
ENSACAG00000004618	LSM12	99	93.782	ENSSSCG00000032394	LSM12	99	93.782	Sus_scrofa
ENSACAG00000004618	LSM12	100	83.673	ENSTRUG00000007121	lsm12b	100	83.673	Takifugu_rubripes
ENSACAG00000004618	LSM12	100	83.673	ENSTNIG00000014436	lsm12b	100	83.673	Tetraodon_nigroviridis
ENSACAG00000004618	LSM12	99	93.264	ENSTBEG00000012523	-	99	93.264	Tupaia_belangeri
ENSACAG00000004618	LSM12	99	90.155	ENSTBEG00000012392	-	99	90.155	Tupaia_belangeri
ENSACAG00000004618	LSM12	99	93.782	ENSTTRG00000010433	LSM12	99	93.782	Tursiops_truncatus
ENSACAG00000004618	LSM12	99	93.782	ENSUAMG00000006313	LSM12	99	93.782	Ursus_americanus
ENSACAG00000004618	LSM12	81	91.139	ENSUMAG00000012987	LSM12	90	91.139	Ursus_maritimus
ENSACAG00000004618	LSM12	99	88.083	ENSVPAG00000011145	LSM12	99	88.083	Vicugna_pacos
ENSACAG00000004618	LSM12	99	93.782	ENSVVUG00000017581	LSM12	99	93.782	Vulpes_vulpes
ENSACAG00000004618	LSM12	83	63.975	ENSXETG00000003371	lsm12	78	63.975	Xenopus_tropicalis
ENSACAG00000004618	LSM12	100	83.163	ENSXCOG00000003994	lsm12b	100	83.163	Xiphophorus_couchianus
ENSACAG00000004618	LSM12	100	83.163	ENSXMAG00000020950	lsm12b	100	83.163	Xiphophorus_maculatus