EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000004973 (Gene tree)
Gene ID: 100560800
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 20645 bases
Position: chrGL343691.1:113393-134037
Accession: 100560800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000004893	RNA_bind	PF08675.11	2.7e-33	1	1
ENSACAP00000004893	CAF1	PF04857.20	7.7e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000005005	PARN-201	3079	XM_003228657	ENSACAP00000004893	650 (aa)	XP_003228705	H9G9S4

Gene Model

Click here to download ENSACAG00000004973's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000004973's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000004973	PARN	100	78.769	ENSG00000140694	PARN	100	89.831	Homo_sapiens
ENSACAG00000004973	PARN	69	30.043	ENSG00000146453	PNLDC1	83	30.043	Homo_sapiens
ENSACAG00000004973	PARN	100	78.187	ENSAMEG00000011208	PARN	100	77.112	Ailuropoda_melanoleuca
ENSACAG00000004973	PARN	90	69.021	ENSACIG00000000619	parn	97	69.342	Amphilophus_citrinellus
ENSACAG00000004973	PARN	90	73.818	ENSAOCG00000003465	parn	84	73.818	Amphiprion_ocellaris
ENSACAG00000004973	PARN	73	78.105	ENSAPEG00000010661	parn	91	78.105	Amphiprion_percula
ENSACAG00000004973	PARN	99	69.325	ENSATEG00000004661	parn	83	74.320	Anabas_testudineus
ENSACAG00000004973	PARN	99	80.000	ENSAPLG00000013914	PARN	90	85.986	Anas_platyrhynchos
ENSACAG00000004973	PARN	100	79.692	ENSANAG00000031516	PARN	100	89.831	Aotus_nancymaae
ENSACAG00000004973	PARN	90	74.068	ENSACLG00000004742	parn	84	74.744	Astatotilapia_calliptera
ENSACAG00000004973	PARN	100	66.170	ENSAMXG00000012390	parn	100	65.723	Astyanax_mexicanus
ENSACAG00000004973	PARN	100	75.038	ENSBTAG00000018097	PARN	89	83.430	Bos_taurus
ENSACAG00000004973	PARN	100	80.615	ENSCJAG00000015866	PARN	100	89.831	Callithrix_jacchus
ENSACAG00000004973	PARN	100	77.538	ENSCAFG00000018795	PARN	100	77.385	Canis_familiaris
ENSACAG00000004973	PARN	100	77.538	ENSCAFG00020024126	PARN	100	77.385	Canis_lupus_dingo
ENSACAG00000004973	PARN	53	31.143	ENSCAFG00020017742	PNLDC1	95	30.286	Canis_lupus_dingo
ENSACAG00000004973	PARN	100	77.642	ENSCHIG00000018143	PARN	90	83.966	Capra_hircus
ENSACAG00000004973	PARN	72	57.261	ENSCAPG00000007984	PARN	78	57.261	Cavia_aperea
ENSACAG00000004973	PARN	100	77.370	ENSCPOG00000002263	PARN	100	77.419	Cavia_porcellus
ENSACAG00000004973	PARN	100	80.308	ENSCCAG00000030367	PARN	100	89.831	Cebus_capucinus
ENSACAG00000004973	PARN	82	87.242	ENSCATG00000041368	PARN	96	89.831	Cercocebus_atys
ENSACAG00000004973	PARN	100	77.231	ENSCLAG00000015406	PARN	99	76.615	Chinchilla_lanigera
ENSACAG00000004973	PARN	100	79.077	ENSCSAG00000008142	PARN	100	79.077	Chlorocebus_sabaeus
ENSACAG00000004973	PARN	99	64.541	ENSCHOG00000007014	PARN	100	63.142	Choloepus_hoffmanni
ENSACAG00000004973	PARN	82	85.234	ENSCPBG00000006609	PARN	90	86.398	Chrysemys_picta_bellii
ENSACAG00000004973	PARN	79	44.465	ENSCING00000010142	-	99	44.465	Ciona_intestinalis
ENSACAG00000004973	PARN	100	68.892	ENSCANG00000028849	-	100	89.831	Colobus_angolensis_palliatus
ENSACAG00000004973	PARN	100	75.115	ENSCGRG00001012096	Parn	100	74.808	Cricetulus_griseus_chok1gshd
ENSACAG00000004973	PARN	73	30.738	ENSCGRG00001007470	-	86	30.328	Cricetulus_griseus_chok1gshd
ENSACAG00000004973	PARN	73	30.738	ENSCGRG00000010221	-	86	30.328	Cricetulus_griseus_crigri
ENSACAG00000004973	PARN	100	75.115	ENSCGRG00000004939	Parn	100	74.808	Cricetulus_griseus_crigri
ENSACAG00000004973	PARN	99	67.228	ENSCSEG00000002064	parn	100	64.865	Cynoglossus_semilaevis
ENSACAG00000004973	PARN	90	72.959	ENSCVAG00000014848	parn	83	72.959	Cyprinodon_variegatus
ENSACAG00000004973	PARN	100	63.459	ENSDARG00000102634	parn	100	74.545	Danio_rerio
ENSACAG00000004973	PARN	100	79.416	ENSDNOG00000000833	PARN	98	85.152	Dasypus_novemcinctus
ENSACAG00000004973	PARN	65	81.439	ENSETEG00000014828	-	69	81.439	Echinops_telfairi
ENSACAG00000004973	PARN	68	30.549	ENSEBUG00000008118	PNLDC1	81	30.369	Eptatretus_burgeri
ENSACAG00000004973	PARN	100	77.385	ENSEASG00005011400	PARN	100	77.385	Equus_asinus_asinus
ENSACAG00000004973	PARN	100	77.077	ENSECAG00000017792	PARN	100	77.077	Equus_caballus
ENSACAG00000004973	PARN	87	71.171	ENSEEUG00000010370	PARN	86	71.171	Erinaceus_europaeus
ENSACAG00000004973	PARN	95	70.305	ENSELUG00000013139	parn	75	74.055	Esox_lucius
ENSACAG00000004973	PARN	100	78.714	ENSFCAG00000044961	PARN	100	88.136	Felis_catus
ENSACAG00000004973	PARN	99	79.782	ENSFALG00000003911	PARN	98	79.938	Ficedula_albicollis
ENSACAG00000004973	PARN	100	77.217	ENSFDAG00000009234	PARN	100	76.154	Fukomys_damarensis
ENSACAG00000004973	PARN	90	68.128	ENSFHEG00000013738	parn	92	84.746	Fundulus_heteroclitus
ENSACAG00000004973	PARN	82	76.723	ENSGMOG00000003231	parn	97	76.723	Gadus_morhua
ENSACAG00000004973	PARN	100	80.799	ENSGALG00000003091	PARN	91	86.897	Gallus_gallus
ENSACAG00000004973	PARN	89	73.980	ENSGAFG00000011061	parn	84	73.737	Gambusia_affinis
ENSACAG00000004973	PARN	84	76.130	ENSGACG00000019501	parn	86	77.654	Gasterosteus_aculeatus
ENSACAG00000004973	PARN	90	84.760	ENSGGOG00000025224	PARN	91	89.831	Gorilla_gorilla
ENSACAG00000004973	PARN	90	73.898	ENSHBUG00000017906	parn	90	77.509	Haplochromis_burtoni
ENSACAG00000004973	PARN	100	76.570	ENSHGLG00000010886	PARN	100	75.692	Heterocephalus_glaber_female
ENSACAG00000004973	PARN	100	76.570	ENSHGLG00100014659	PARN	100	75.692	Heterocephalus_glaber_male
ENSACAG00000004973	PARN	87	69.702	ENSHCOG00000008683	parn	98	69.702	Hippocampus_comes
ENSACAG00000004973	PARN	89	63.322	ENSIPUG00000012401	parn	84	63.432	Ictalurus_punctatus
ENSACAG00000004973	PARN	100	78.714	ENSSTOG00000007519	PARN	100	77.231	Ictidomys_tridecemlineatus
ENSACAG00000004973	PARN	100	74.923	ENSJJAG00000023049	Parn	100	74.923	Jaculus_jaculus
ENSACAG00000004973	PARN	89	74.658	ENSKMAG00000009462	parn	83	74.658	Kryptolebias_marmoratus
ENSACAG00000004973	PARN	99	68.079	ENSLBEG00000009167	parn	89	73.435	Labrus_bergylta
ENSACAG00000004973	PARN	77	77.030	ENSLACG00000004207	PARN	100	75.529	Latimeria_chalumnae
ENSACAG00000004973	PARN	91	76.351	ENSLOCG00000000715	parn	84	77.015	Lepisosteus_oculatus
ENSACAG00000004973	PARN	56	31.436	ENSLAFG00000030189	PNLDC1	99	31.165	Loxodonta_africana
ENSACAG00000004973	PARN	100	76.570	ENSLAFG00000015036	PARN	100	76.462	Loxodonta_africana
ENSACAG00000004973	PARN	100	75.730	ENSMFAG00000044852	PARN	100	89.831	Macaca_fascicularis
ENSACAG00000004973	PARN	100	78.923	ENSMMUG00000018849	PARN	100	89.831	Macaca_mulatta
ENSACAG00000004973	PARN	100	79.077	ENSMNEG00000045108	PARN	100	89.831	Macaca_nemestrina
ENSACAG00000004973	PARN	100	78.923	ENSMLEG00000031743	PARN	100	89.831	Mandrillus_leucophaeus
ENSACAG00000004973	PARN	90	73.684	ENSMAMG00000006939	parn	83	73.684	Mastacembelus_armatus
ENSACAG00000004973	PARN	90	73.898	ENSMZEG00005013590	parn	95	74.126	Maylandia_zebra
ENSACAG00000004973	PARN	98	77.743	ENSMGAG00000001004	PARN	89	84.683	Meleagris_gallopavo
ENSACAG00000004973	PARN	100	69.985	ENSMAUG00000008025	Parn	91	73.649	Mesocricetus_auratus
ENSACAG00000004973	PARN	100	79.385	ENSMICG00000016053	PARN	100	88.136	Microcebus_murinus
ENSACAG00000004973	PARN	76	83.434	ENSMOCG00000022211	Parn	100	83.434	Microtus_ochrogaster
ENSACAG00000004973	PARN	82	75.933	ENSMMOG00000011333	parn	87	75.933	Mola_mola
ENSACAG00000004973	PARN	76	87.928	ENSMODG00000004915	PARN	99	87.928	Monodelphis_domestica
ENSACAG00000004973	PARN	82	78.439	ENSMALG00000019426	parn	91	78.439	Monopterus_albus
ENSACAG00000004973	PARN	100	75.382	MGP_CAROLIEiJ_G0020466	Parn	100	75.229	Mus_caroli
ENSACAG00000004973	PARN	50	32.132	ENSMUSG00000073460	Pnldc1	97	31.832	Mus_musculus
ENSACAG00000004973	PARN	100	75.382	ENSMUSG00000022685	Parn	100	84.146	Mus_musculus
ENSACAG00000004973	PARN	100	75.229	MGP_PahariEiJ_G0016172	Parn	100	75.229	Mus_pahari
ENSACAG00000004973	PARN	100	75.535	MGP_SPRETEiJ_G0021361	Parn	100	75.535	Mus_spretus
ENSACAG00000004973	PARN	100	77.538	ENSMPUG00000014464	PARN	100	77.385	Mustela_putorius_furo
ENSACAG00000004973	PARN	76	85.455	ENSMLUG00000005414	PARN	100	85.455	Myotis_lucifugus
ENSACAG00000004973	PARN	82	76.822	ENSNBRG00000006805	parn	90	77.196	Neolamprologus_brichardi
ENSACAG00000004973	PARN	100	78.769	ENSNLEG00000010241	PARN	100	89.831	Nomascus_leucogenys
ENSACAG00000004973	PARN	90	71.311	ENSMEUG00000008178	-	78	71.311	Notamacropus_eugenii
ENSACAG00000004973	PARN	99	73.095	ENSOPRG00000012187	PARN	100	73.095	Ochotona_princeps
ENSACAG00000004973	PARN	100	69.863	ENSODEG00000001617	PARN	100	69.372	Octodon_degus
ENSACAG00000004973	PARN	90	74.068	ENSONIG00000000151	parn	83	79.259	Oreochromis_niloticus
ENSACAG00000004973	PARN	60	76.350	ENSOANG00000020155	-	97	76.350	Ornithorhynchus_anatinus
ENSACAG00000004973	PARN	61	30.993	ENSOANG00000012199	PNLDC1	81	30.700	Ornithorhynchus_anatinus
ENSACAG00000004973	PARN	99	77.469	ENSOCUG00000000322	PARN	99	77.519	Oryctolagus_cuniculus
ENSACAG00000004973	PARN	90	72.128	ENSORLG00020010313	parn	85	72.449	Oryzias_latipes_hni
ENSACAG00000004973	PARN	90	72.128	ENSORLG00015000300	parn	85	72.449	Oryzias_latipes_hsok
ENSACAG00000004973	PARN	100	64.714	ENSOMEG00000019555	parn	97	67.117	Oryzias_melastigma
ENSACAG00000004973	PARN	76	84.879	ENSOGAG00000014626	PARN	100	84.879	Otolemur_garnettii
ENSACAG00000004973	PARN	76	87.071	ENSOARG00000007574	PARN	100	87.071	Ovis_aries
ENSACAG00000004973	PARN	100	78.769	ENSPPAG00000031438	PARN	100	89.831	Pan_paniscus
ENSACAG00000004973	PARN	100	78.560	ENSPPRG00000018583	PARN	100	88.136	Panthera_pardus
ENSACAG00000004973	PARN	100	78.714	ENSPTIG00000012135	PARN	100	88.136	Panthera_tigris_altaica
ENSACAG00000004973	PARN	100	78.462	ENSPTRG00000007792	PARN	100	89.831	Pan_troglodytes
ENSACAG00000004973	PARN	69	30.258	ENSPTRG00000018762	PNLDC1	83	30.258	Pan_troglodytes
ENSACAG00000004973	PARN	100	76.462	ENSPANG00000020099	PARN	100	89.831	Papio_anubis
ENSACAG00000004973	PARN	90	73.435	ENSPKIG00000022807	parn	91	70.152	Paramormyrops_kingsleyae
ENSACAG00000004973	PARN	92	84.757	ENSPSIG00000014804	PARN	100	78.209	Pelodiscus_sinensis
ENSACAG00000004973	PARN	83	74.259	ENSPMGG00000014431	parn	75	74.444	Periophthalmus_magnuspinnatus
ENSACAG00000004973	PARN	100	73.733	ENSPEMG00000018439	Parn	100	71.951	Peromyscus_maniculatus_bairdii
ENSACAG00000004973	PARN	80	66.987	ENSPMAG00000003956	parn	99	66.219	Petromyzon_marinus
ENSACAG00000004973	PARN	65	80.189	ENSPCIG00000001259	PARN	91	88.136	Phascolarctos_cinereus
ENSACAG00000004973	PARN	89	74.106	ENSPFOG00000012823	parn	84	73.367	Poecilia_formosa
ENSACAG00000004973	PARN	89	74.276	ENSPLAG00000006395	parn	84	73.534	Poecilia_latipinna
ENSACAG00000004973	PARN	89	74.276	ENSPMEG00000007711	parn	84	73.534	Poecilia_mexicana
ENSACAG00000004973	PARN	89	74.106	ENSPREG00000000147	parn	84	73.367	Poecilia_reticulata
ENSACAG00000004973	PARN	100	78.221	ENSPPYG00000007123	PARN	100	78.221	Pongo_abelii
ENSACAG00000004973	PARN	95	68.599	ENSPCAG00000001741	PARN	100	67.423	Procavia_capensis
ENSACAG00000004973	PARN	100	76.876	ENSPCOG00000019292	PARN	100	88.136	Propithecus_coquereli
ENSACAG00000004973	PARN	61	30.000	ENSPVAG00000005325	PNLDC1	72	30.732	Pteropus_vampyrus
ENSACAG00000004973	PARN	99	73.839	ENSPVAG00000002547	PARN	100	72.939	Pteropus_vampyrus
ENSACAG00000004973	PARN	98	70.110	ENSPNYG00000006835	parn	95	71.379	Pundamilia_nyererei
ENSACAG00000004973	PARN	93	65.391	ENSPNAG00000018905	parn	100	65.231	Pygocentrus_nattereri
ENSACAG00000004973	PARN	100	75.151	ENSRNOG00000002912	Parn	98	79.798	Rattus_norvegicus
ENSACAG00000004973	PARN	73	30.185	ENSRNOG00000023140	Pnldc1	89	31.832	Rattus_norvegicus
ENSACAG00000004973	PARN	53	75.000	ENSRBIG00000018726	PARN	100	72.886	Rhinopithecus_bieti
ENSACAG00000004973	PARN	53	75.000	ENSRROG00000011162	-	100	72.886	Rhinopithecus_roxellana
ENSACAG00000004973	PARN	100	78.462	ENSSBOG00000034726	PARN	100	89.831	Saimiri_boliviensis_boliviensis
ENSACAG00000004973	PARN	61	31.068	ENSSHAG00000015192	PNLDC1	65	31.796	Sarcophilus_harrisii
ENSACAG00000004973	PARN	64	86.396	ENSSHAG00000008493	PARN	94	86.396	Sarcophilus_harrisii
ENSACAG00000004973	PARN	96	71.704	ENSSFOG00015014165	parn	92	73.875	Scleropages_formosus
ENSACAG00000004973	PARN	90	72.402	ENSSMAG00000000685	parn	92	69.164	Scophthalmus_maximus
ENSACAG00000004973	PARN	99	69.419	ENSSDUG00000014555	parn	83	74.363	Seriola_dumerili
ENSACAG00000004973	PARN	67	86.897	ENSSARG00000014339	PARN	75	86.897	Sorex_araneus
ENSACAG00000004973	PARN	100	81.040	ENSSPUG00000007719	PARN	100	81.106	Sphenodon_punctatus
ENSACAG00000004973	PARN	89	74.957	ENSSPAG00000007095	parn	86	75.373	Stegastes_partitus
ENSACAG00000004973	PARN	100	77.846	ENSSSCG00000007878	PARN	89	77.692	Sus_scrofa
ENSACAG00000004973	PARN	99	79.535	ENSTGUG00000004971	PARN	99	79.225	Taeniopygia_guttata
ENSACAG00000004973	PARN	54	30.278	ENSTGUG00000011418	PNLDC1	68	30.278	Taeniopygia_guttata
ENSACAG00000004973	PARN	100	67.884	ENSTNIG00000008252	parn	90	74.188	Tetraodon_nigroviridis
ENSACAG00000004973	PARN	91	65.482	ENSTBEG00000010407	PARN	100	64.467	Tupaia_belangeri
ENSACAG00000004973	PARN	99	73.250	ENSTTRG00000002843	PARN	100	73.250	Tursiops_truncatus
ENSACAG00000004973	PARN	69	73.171	ENSUAMG00000008283	PARN	94	71.167	Ursus_americanus
ENSACAG00000004973	PARN	100	78.714	ENSUMAG00000004527	PARN	100	77.846	Ursus_maritimus
ENSACAG00000004973	PARN	90	79.626	ENSVPAG00000008968	PARN	93	80.977	Vicugna_pacos
ENSACAG00000004973	PARN	100	77.538	ENSVVUG00000019509	PARN	100	77.385	Vulpes_vulpes
ENSACAG00000004973	PARN	100	73.466	ENSXETG00000010994	parn	100	81.818	Xenopus_tropicalis
ENSACAG00000004973	PARN	89	70.187	ENSXCOG00000015990	parn	96	69.983	Xiphophorus_couchianus
ENSACAG00000004973	PARN	90	73.367	ENSXMAG00000014783	parn	84	73.693	Xiphophorus_maculatus