EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000005284 (Gene tree)
Gene ID: 100552587
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 17424 bases
Position: chr4:80521890-80539313
Accession: 100552587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000005238	HAT	PF02184.16	1.3e-37	1	2
ENSACAP00000005238	HAT	PF02184.16	1.3e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000005355	CRNKL1-201	2297	XM_008109086	ENSACAP00000005238	685 (aa)	XP_008107293	G1KDZ0

Gene Model

Click here to download ENSACAG00000005284's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000005284's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000005284	CRNKL1	99	92.533	ENSG00000101343	CRNKL1	99	92.533	Homo_sapiens
ENSACAG00000005284	CRNKL1	100	87.045	ENSAPOG00000009705	crnkl1	98	86.283	Acanthochromis_polyacanthus
ENSACAG00000005284	CRNKL1	99	93.068	ENSAMEG00000000270	CRNKL1	82	93.119	Ailuropoda_melanoleuca
ENSACAG00000005284	CRNKL1	98	87.389	ENSACIG00000015267	crnkl1	90	87.389	Amphilophus_citrinellus
ENSACAG00000005284	CRNKL1	100	87.336	ENSAOCG00000021964	crnkl1	91	87.336	Amphiprion_ocellaris
ENSACAG00000005284	CRNKL1	100	86.773	ENSAPEG00000015041	crnkl1	90	87.500	Amphiprion_percula
ENSACAG00000005284	CRNKL1	99	86.471	ENSATEG00000001068	crnkl1	89	86.471	Anabas_testudineus
ENSACAG00000005284	CRNKL1	99	91.108	ENSAPLG00000013105	CRNKL1	99	91.108	Anas_platyrhynchos
ENSACAG00000005284	CRNKL1	92	93.333	ENSANAG00000024889	CRNKL1	99	93.333	Aotus_nancymaae
ENSACAG00000005284	CRNKL1	99	87.812	ENSACLG00000010813	crnkl1	90	87.812	Astatotilapia_calliptera
ENSACAG00000005284	CRNKL1	97	89.023	ENSAMXG00000018334	crnkl1	91	88.183	Astyanax_mexicanus
ENSACAG00000005284	CRNKL1	99	92.669	ENSBTAG00000008472	CRNKL1	98	92.669	Bos_taurus
ENSACAG00000005284	CRNKL1	94	62.830	WBGene00019762	M03F8.3	92	61.103	Caenorhabditis_elegans
ENSACAG00000005284	CRNKL1	99	92.533	ENSCJAG00000005393	CRNKL1	99	92.533	Callithrix_jacchus
ENSACAG00000005284	CRNKL1	99	92.773	ENSCAFG00000005333	CRNKL1	94	92.826	Canis_familiaris
ENSACAG00000005284	CRNKL1	99	92.826	ENSCAFG00020027488	CRNKL1	99	92.826	Canis_lupus_dingo
ENSACAG00000005284	CRNKL1	99	91.202	ENSCHIG00000013171	CRNKL1	98	91.202	Capra_hircus
ENSACAG00000005284	CRNKL1	99	92.533	ENSTSYG00000004197	CRNKL1	99	92.533	Carlito_syrichta
ENSACAG00000005284	CRNKL1	95	91.086	ENSCAPG00000010501	CRNKL1	99	91.086	Cavia_aperea
ENSACAG00000005284	CRNKL1	99	91.801	ENSCPOG00000004418	CRNKL1	99	91.801	Cavia_porcellus
ENSACAG00000005284	CRNKL1	99	92.387	ENSCCAG00000027037	CRNKL1	99	92.387	Cebus_capucinus
ENSACAG00000005284	CRNKL1	99	92.533	ENSCATG00000034247	CRNKL1	99	92.533	Cercocebus_atys
ENSACAG00000005284	CRNKL1	99	92.533	ENSCLAG00000013859	CRNKL1	99	92.533	Chinchilla_lanigera
ENSACAG00000005284	CRNKL1	99	92.533	ENSCSAG00000011434	CRNKL1	99	92.533	Chlorocebus_sabaeus
ENSACAG00000005284	CRNKL1	99	92.330	ENSCHOG00000006371	CRNKL1	83	92.387	Choloepus_hoffmanni
ENSACAG00000005284	CRNKL1	99	94.591	ENSCPBG00000023501	CRNKL1	99	94.591	Chrysemys_picta_bellii
ENSACAG00000005284	CRNKL1	97	68.675	ENSCING00000002709	-	99	67.254	Ciona_intestinalis
ENSACAG00000005284	CRNKL1	99	92.679	ENSCANG00000038789	CRNKL1	99	92.679	Colobus_angolensis_palliatus
ENSACAG00000005284	CRNKL1	99	92.679	ENSCGRG00001000687	-	99	92.679	Cricetulus_griseus_chok1gshd
ENSACAG00000005284	CRNKL1	99	92.679	ENSCGRG00001001115	-	99	92.679	Cricetulus_griseus_chok1gshd
ENSACAG00000005284	CRNKL1	99	92.679	ENSCGRG00000007854	Crnkl1	99	92.679	Cricetulus_griseus_crigri
ENSACAG00000005284	CRNKL1	97	87.556	ENSCSEG00000005594	crnkl1	87	85.239	Cynoglossus_semilaevis
ENSACAG00000005284	CRNKL1	97	87.556	ENSCVAG00000015172	crnkl1	92	85.985	Cyprinodon_variegatus
ENSACAG00000005284	CRNKL1	97	88.537	ENSDARG00000007901	crnkl1	90	87.408	Danio_rerio
ENSACAG00000005284	CRNKL1	99	92.815	ENSDNOG00000016226	CRNKL1	95	92.815	Dasypus_novemcinctus
ENSACAG00000005284	CRNKL1	98	85.052	ENSDORG00000023724	-	99	85.052	Dipodomys_ordii
ENSACAG00000005284	CRNKL1	98	83.905	ENSDORG00000030174	-	99	83.905	Dipodomys_ordii
ENSACAG00000005284	CRNKL1	99	91.292	ENSDORG00000000394	-	99	91.292	Dipodomys_ordii
ENSACAG00000005284	CRNKL1	98	68.889	FBgn0000377	crn	97	68.275	Drosophila_melanogaster
ENSACAG00000005284	CRNKL1	99	80.966	ENSETEG00000003711	CRNKL1	83	80.966	Echinops_telfairi
ENSACAG00000005284	CRNKL1	99	61.386	ENSEBUG00000013461	crnkl1	97	56.686	Eptatretus_burgeri
ENSACAG00000005284	CRNKL1	99	93.129	ENSEASG00005002072	CRNKL1	99	93.129	Equus_asinus_asinus
ENSACAG00000005284	CRNKL1	99	93.129	ENSECAG00000022215	CRNKL1	99	93.129	Equus_caballus
ENSACAG00000005284	CRNKL1	99	90.265	ENSEEUG00000000413	CRNKL1	92	90.337	Erinaceus_europaeus
ENSACAG00000005284	CRNKL1	98	87.126	ENSELUG00000015424	crnkl1	97	85.924	Esox_lucius
ENSACAG00000005284	CRNKL1	99	93.119	ENSFCAG00000000714	CRNKL1	99	93.119	Felis_catus
ENSACAG00000005284	CRNKL1	98	92.090	ENSFALG00000004611	CRNKL1	99	92.090	Ficedula_albicollis
ENSACAG00000005284	CRNKL1	99	92.533	ENSFDAG00000000604	CRNKL1	99	92.533	Fukomys_damarensis
ENSACAG00000005284	CRNKL1	99	86.136	ENSFHEG00000013163	crnkl1	88	86.136	Fundulus_heteroclitus
ENSACAG00000005284	CRNKL1	98	85.501	ENSGMOG00000007609	crnkl1	94	83.918	Gadus_morhua
ENSACAG00000005284	CRNKL1	99	93.275	ENSGALG00000008429	CRNKL1	99	93.275	Gallus_gallus
ENSACAG00000005284	CRNKL1	98	86.736	ENSGAFG00000014249	crnkl1	89	86.370	Gambusia_affinis
ENSACAG00000005284	CRNKL1	100	84.827	ENSGACG00000011852	crnkl1	92	84.827	Gasterosteus_aculeatus
ENSACAG00000005284	CRNKL1	95	93.119	ENSGAGG00000021233	CRNKL1	99	93.594	Gopherus_agassizii
ENSACAG00000005284	CRNKL1	99	92.533	ENSGGOG00000014176	CRNKL1	99	92.533	Gorilla_gorilla
ENSACAG00000005284	CRNKL1	99	87.665	ENSHBUG00000005246	crnkl1	90	87.665	Haplochromis_burtoni
ENSACAG00000005284	CRNKL1	99	92.387	ENSHGLG00000010856	CRNKL1	99	92.387	Heterocephalus_glaber_female
ENSACAG00000005284	CRNKL1	99	92.387	ENSHGLG00100011521	CRNKL1	99	92.387	Heterocephalus_glaber_male
ENSACAG00000005284	CRNKL1	98	85.629	ENSHCOG00000006420	crnkl1	99	84.111	Hippocampus_comes
ENSACAG00000005284	CRNKL1	97	76.018	ENSIPUG00000006836	-	99	75.519	Ictalurus_punctatus
ENSACAG00000005284	CRNKL1	93	69.969	ENSIPUG00000000315	-	99	71.181	Ictalurus_punctatus
ENSACAG00000005284	CRNKL1	95	88.136	ENSIPUG00000006751	crnkl1	92	87.179	Ictalurus_punctatus
ENSACAG00000005284	CRNKL1	99	93.119	ENSSTOG00000014747	CRNKL1	99	93.119	Ictidomys_tridecemlineatus
ENSACAG00000005284	CRNKL1	99	90.558	ENSJJAG00000016926	Crnkl1	99	90.558	Jaculus_jaculus
ENSACAG00000005284	CRNKL1	99	86.754	ENSKMAG00000003620	crnkl1	88	86.754	Kryptolebias_marmoratus
ENSACAG00000005284	CRNKL1	97	71.513	ENSLBEG00000003543	crnkl1	92	71.533	Labrus_bergylta
ENSACAG00000005284	CRNKL1	99	88.450	ENSLACG00000001129	CRNKL1	100	88.450	Latimeria_chalumnae
ENSACAG00000005284	CRNKL1	97	89.173	ENSLOCG00000016889	crnkl1	95	87.977	Lepisosteus_oculatus
ENSACAG00000005284	CRNKL1	99	91.667	ENSLAFG00000004512	CRNKL1	99	92.398	Loxodonta_africana
ENSACAG00000005284	CRNKL1	99	92.533	ENSMFAG00000039893	CRNKL1	99	92.533	Macaca_fascicularis
ENSACAG00000005284	CRNKL1	99	92.533	ENSMMUG00000007709	CRNKL1	99	92.533	Macaca_mulatta
ENSACAG00000005284	CRNKL1	99	92.533	ENSMNEG00000037490	CRNKL1	99	92.533	Macaca_nemestrina
ENSACAG00000005284	CRNKL1	99	92.533	ENSMLEG00000034885	CRNKL1	99	92.533	Mandrillus_leucophaeus
ENSACAG00000005284	CRNKL1	99	86.471	ENSMAMG00000008757	crnkl1	90	86.471	Mastacembelus_armatus
ENSACAG00000005284	CRNKL1	99	87.812	ENSMZEG00005022345	crnkl1	91	87.812	Maylandia_zebra
ENSACAG00000005284	CRNKL1	99	92.847	ENSMGAG00000003452	CRNKL1	94	92.847	Meleagris_gallopavo
ENSACAG00000005284	CRNKL1	99	92.826	ENSMAUG00000020764	Crnkl1	99	92.826	Mesocricetus_auratus
ENSACAG00000005284	CRNKL1	99	93.119	ENSMICG00000006048	CRNKL1	99	93.119	Microcebus_murinus
ENSACAG00000005284	CRNKL1	99	84.604	ENSMOCG00000000681	-	99	84.604	Microtus_ochrogaster
ENSACAG00000005284	CRNKL1	99	65.401	ENSMOCG00000004179	-	98	65.401	Microtus_ochrogaster
ENSACAG00000005284	CRNKL1	92	85.443	ENSMMOG00000017601	crnkl1	97	85.443	Mola_mola
ENSACAG00000005284	CRNKL1	99	90.607	ENSMODG00000005961	-	99	90.607	Monodelphis_domestica
ENSACAG00000005284	CRNKL1	99	85.191	ENSMODG00000010857	-	99	85.191	Monodelphis_domestica
ENSACAG00000005284	CRNKL1	99	62.408	ENSMALG00000011211	crnkl1	89	64.516	Monopterus_albus
ENSACAG00000005284	CRNKL1	99	92.533	MGP_CAROLIEiJ_G0024394	Crnkl1	99	92.533	Mus_caroli
ENSACAG00000005284	CRNKL1	99	92.679	ENSMUSG00000001767	Crnkl1	99	92.679	Mus_musculus
ENSACAG00000005284	CRNKL1	99	91.362	MGP_PahariEiJ_G0025838	Crnkl1	99	91.362	Mus_pahari
ENSACAG00000005284	CRNKL1	99	92.826	MGP_SPRETEiJ_G0025312	Crnkl1	99	92.826	Mus_spretus
ENSACAG00000005284	CRNKL1	99	92.972	ENSMPUG00000001226	CRNKL1	99	92.972	Mustela_putorius_furo
ENSACAG00000005284	CRNKL1	99	92.194	ENSMLUG00000016513	CRNKL1	89	92.251	Myotis_lucifugus
ENSACAG00000005284	CRNKL1	99	90.661	ENSNGAG00000023097	Crnkl1	99	90.661	Nannospalax_galili
ENSACAG00000005284	CRNKL1	99	87.959	ENSNBRG00000007867	crnkl1	90	87.959	Neolamprologus_brichardi
ENSACAG00000005284	CRNKL1	99	89.165	ENSNLEG00000009862	CRNKL1	99	89.165	Nomascus_leucogenys
ENSACAG00000005284	CRNKL1	97	93.862	ENSMEUG00000012167	-	99	93.862	Notamacropus_eugenii
ENSACAG00000005284	CRNKL1	99	85.505	ENSMEUG00000002361	-	99	85.505	Notamacropus_eugenii
ENSACAG00000005284	CRNKL1	86	63.006	ENSOPRG00000009242	-	62	63.006	Ochotona_princeps
ENSACAG00000005284	CRNKL1	99	92.387	ENSODEG00000012175	CRNKL1	99	92.387	Octodon_degus
ENSACAG00000005284	CRNKL1	99	87.812	ENSONIG00000018728	crnkl1	90	87.812	Oreochromis_niloticus
ENSACAG00000005284	CRNKL1	99	92.082	ENSOCUG00000015484	CRNKL1	83	92.722	Oryctolagus_cuniculus
ENSACAG00000005284	CRNKL1	99	84.357	ENSORLG00000017240	crnkl1	96	80.753	Oryzias_latipes
ENSACAG00000005284	CRNKL1	99	84.649	ENSORLG00020001742	crnkl1	90	85.630	Oryzias_latipes_hni
ENSACAG00000005284	CRNKL1	99	84.503	ENSORLG00015019564	crnkl1	91	84.503	Oryzias_latipes_hsok
ENSACAG00000005284	CRNKL1	100	86.047	ENSOMEG00000019895	crnkl1	92	86.047	Oryzias_melastigma
ENSACAG00000005284	CRNKL1	99	92.679	ENSOGAG00000011544	CRNKL1	99	92.679	Otolemur_garnettii
ENSACAG00000005284	CRNKL1	99	92.319	ENSOARG00000002150	CRNKL1	89	92.375	Ovis_aries
ENSACAG00000005284	CRNKL1	99	91.298	ENSPPAG00000027847	CRNKL1	83	91.362	Pan_paniscus
ENSACAG00000005284	CRNKL1	99	93.119	ENSPPRG00000001955	CRNKL1	99	93.119	Panthera_pardus
ENSACAG00000005284	CRNKL1	99	93.119	ENSPTIG00000007393	CRNKL1	99	93.119	Panthera_tigris_altaica
ENSACAG00000005284	CRNKL1	99	92.533	ENSPTRG00000030609	CRNKL1	99	92.533	Pan_troglodytes
ENSACAG00000005284	CRNKL1	99	92.533	ENSPANG00000017420	CRNKL1	99	92.533	Papio_anubis
ENSACAG00000005284	CRNKL1	97	83.033	ENSPKIG00000017093	crnkl1	89	82.379	Paramormyrops_kingsleyae
ENSACAG00000005284	CRNKL1	99	93.539	ENSPSIG00000012705	CRNKL1	99	93.539	Pelodiscus_sinensis
ENSACAG00000005284	CRNKL1	99	79.502	ENSPMGG00000006263	crnkl1	94	80.510	Periophthalmus_magnuspinnatus
ENSACAG00000005284	CRNKL1	99	93.119	ENSPEMG00000000073	-	99	93.119	Peromyscus_maniculatus_bairdii
ENSACAG00000005284	CRNKL1	99	81.977	ENSPMAG00000002250	crnkl1	99	81.977	Petromyzon_marinus
ENSACAG00000005284	CRNKL1	99	92.962	ENSPCIG00000025825	CRNKL1	95	92.962	Phascolarctos_cinereus
ENSACAG00000005284	CRNKL1	98	86.587	ENSPFOG00000005102	crnkl1	91	86.222	Poecilia_formosa
ENSACAG00000005284	CRNKL1	98	86.587	ENSPLAG00000007288	crnkl1	89	85.109	Poecilia_latipinna
ENSACAG00000005284	CRNKL1	98	86.736	ENSPMEG00000008865	crnkl1	93	85.255	Poecilia_mexicana
ENSACAG00000005284	CRNKL1	97	86.657	ENSPREG00000012615	crnkl1	92	85.044	Poecilia_reticulata
ENSACAG00000005284	CRNKL1	99	92.773	ENSPPYG00000010747	CRNKL1	81	92.826	Pongo_abelii
ENSACAG00000005284	CRNKL1	99	86.726	ENSPCAG00000003296	CRNKL1	85	86.823	Procavia_capensis
ENSACAG00000005284	CRNKL1	99	92.035	ENSPCOG00000017608	CRNKL1	83	92.094	Propithecus_coquereli
ENSACAG00000005284	CRNKL1	99	92.625	ENSPVAG00000006207	CRNKL1	83	92.679	Pteropus_vampyrus
ENSACAG00000005284	CRNKL1	99	87.665	ENSPNYG00000001977	crnkl1	90	87.665	Pundamilia_nyererei
ENSACAG00000005284	CRNKL1	98	89.435	ENSPNAG00000001507	crnkl1	97	85.169	Pygocentrus_nattereri
ENSACAG00000005284	CRNKL1	99	92.679	ENSRNOG00000010587	Crnkl1	99	92.679	Rattus_norvegicus
ENSACAG00000005284	CRNKL1	99	92.387	ENSRNOG00000040045	Crnkl1	99	92.387	Rattus_norvegicus
ENSACAG00000005284	CRNKL1	99	92.387	ENSRBIG00000031770	CRNKL1	99	92.387	Rhinopithecus_bieti
ENSACAG00000005284	CRNKL1	99	92.240	ENSRROG00000040450	CRNKL1	99	92.240	Rhinopithecus_roxellana
ENSACAG00000005284	CRNKL1	94	37.736	YLR117C	CLF1	99	37.826	Saccharomyces_cerevisiae
ENSACAG00000005284	CRNKL1	99	92.387	ENSSBOG00000029672	CRNKL1	99	92.387	Saimiri_boliviensis_boliviensis
ENSACAG00000005284	CRNKL1	96	73.788	ENSSHAG00000011199	CRNKL1	99	73.788	Sarcophilus_harrisii
ENSACAG00000005284	CRNKL1	97	87.934	ENSSFOG00015000946	crnkl1	89	86.530	Scleropages_formosus
ENSACAG00000005284	CRNKL1	100	85.735	ENSSMAG00000007933	crnkl1	89	85.735	Scophthalmus_maximus
ENSACAG00000005284	CRNKL1	99	80.560	ENSSDUG00000012625	crnkl1	87	80.560	Seriola_dumerili
ENSACAG00000005284	CRNKL1	99	88.053	ENSSLDG00000021413	crnkl1	88	88.053	Seriola_lalandi_dorsalis
ENSACAG00000005284	CRNKL1	99	92.387	ENSSARG00000006443	CRNKL1	82	92.387	Sorex_araneus
ENSACAG00000005284	CRNKL1	100	93.732	ENSSPUG00000005254	CRNKL1	100	93.732	Sphenodon_punctatus
ENSACAG00000005284	CRNKL1	100	85.920	ENSSPAG00000016150	crnkl1	88	87.906	Stegastes_partitus
ENSACAG00000005284	CRNKL1	99	92.972	ENSSSCG00000038587	CRNKL1	99	92.972	Sus_scrofa
ENSACAG00000005284	CRNKL1	99	91.971	ENSTGUG00000007645	CRNKL1	98	91.971	Taeniopygia_guttata
ENSACAG00000005284	CRNKL1	98	81.967	ENSTRUG00000015417	crnkl1	90	81.471	Takifugu_rubripes
ENSACAG00000005284	CRNKL1	97	86.228	ENSTNIG00000010710	crnkl1	99	85.022	Tetraodon_nigroviridis
ENSACAG00000005284	CRNKL1	91	91.360	ENSTBEG00000001304	CRNKL1	82	91.429	Tupaia_belangeri
ENSACAG00000005284	CRNKL1	91	88.800	ENSTTRG00000000484	CRNKL1	81	88.889	Tursiops_truncatus
ENSACAG00000005284	CRNKL1	99	93.119	ENSUAMG00000018586	CRNKL1	99	93.119	Ursus_americanus
ENSACAG00000005284	CRNKL1	99	93.119	ENSUMAG00000024957	CRNKL1	99	93.119	Ursus_maritimus
ENSACAG00000005284	CRNKL1	99	92.773	ENSVVUG00000012559	CRNKL1	82	92.826	Vulpes_vulpes
ENSACAG00000005284	CRNKL1	99	90.393	ENSXETG00000009698	crnkl1	99	90.393	Xenopus_tropicalis
ENSACAG00000005284	CRNKL1	98	85.714	ENSXCOG00000000824	crnkl1	92	84.402	Xiphophorus_couchianus
ENSACAG00000005284	CRNKL1	98	86.736	ENSXMAG00000006896	crnkl1	92	85.401	Xiphophorus_maculatus