EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000005452 (Gene tree)
Gene ID: 100554582
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 551749 bases
Position: chrGL343457.1:116564-668312
Accession: 100554582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000005311	RRM_1	PF00076.22	3.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000005428	MSI2-201	1547	XM_008120274	ENSACAP00000005311	400 (aa)	XP_008118481	H9GA69

Gene Model

Click here to download ENSACAG00000005452's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000005452's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000005452	MSI2	88	59.437	ENSACAG00000002762	MSI1	81	84.324

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000005452	MSI2	74	95.455	ENSG00000153944	MSI2	94	97.887	Homo_sapiens
ENSACAG00000005452	MSI2	88	75.871	ENSAPOG00000001658	msi2a	93	93.011	Acanthochromis_polyacanthus
ENSACAG00000005452	MSI2	68	97.826	ENSAMEG00000002697	MSI2	99	71.105	Ailuropoda_melanoleuca
ENSACAG00000005452	MSI2	88	81.356	ENSACIG00000009475	msi2a	94	81.356	Amphilophus_citrinellus
ENSACAG00000005452	MSI2	70	90.566	ENSAPEG00000007706	msi2a	89	93.478	Amphiprion_percula
ENSACAG00000005452	MSI2	70	91.038	ENSATEG00000003301	-	95	94.022	Anabas_testudineus
ENSACAG00000005452	MSI2	88	75.871	ENSATEG00000010498	msi2a	93	93.011	Anabas_testudineus
ENSACAG00000005452	MSI2	74	95.455	ENSANAG00000037827	MSI2	92	97.849	Aotus_nancymaae
ENSACAG00000005452	MSI2	88	75.603	ENSACLG00000007752	msi2a	93	92.473	Astatotilapia_calliptera
ENSACAG00000005452	MSI2	88	83.662	ENSAMXG00000032796	msi2a	89	96.739	Astyanax_mexicanus
ENSACAG00000005452	MSI2	88	83.333	ENSAMXG00000010474	msi2b	93	96.196	Astyanax_mexicanus
ENSACAG00000005452	MSI2	74	93.939	ENSBTAG00000004406	MSI2	93	97.826	Bos_taurus
ENSACAG00000005452	MSI2	74	95.455	ENSCJAG00000013998	MSI2	92	97.849	Callithrix_jacchus
ENSACAG00000005452	MSI2	68	97.826	ENSCAFG00020025620	MSI2	73	97.849	Canis_lupus_dingo
ENSACAG00000005452	MSI2	74	93.939	ENSCHIG00000016580	MSI2	90	97.826	Capra_hircus
ENSACAG00000005452	MSI2	76	95.455	ENSCPOG00000034042	MSI2	93	95.855	Cavia_porcellus
ENSACAG00000005452	MSI2	74	95.455	ENSCCAG00000033927	MSI2	92	97.849	Cebus_capucinus
ENSACAG00000005452	MSI2	74	95.455	ENSCATG00000040879	MSI2	92	97.849	Cercocebus_atys
ENSACAG00000005452	MSI2	68	97.826	ENSCLAG00000014325	MSI2	94	71.105	Chinchilla_lanigera
ENSACAG00000005452	MSI2	74	95.455	ENSCSAG00000005633	MSI2	90	97.826	Chlorocebus_sabaeus
ENSACAG00000005452	MSI2	52	96.078	ENSCHOG00000008660	MSI2	74	96.078	Choloepus_hoffmanni
ENSACAG00000005452	MSI2	90	98.045	ENSCPBG00000009942	MSI2	98	98.045	Chrysemys_picta_bellii
ENSACAG00000005452	MSI2	68	97.826	ENSCANG00000036414	MSI2	92	97.849	Colobus_angolensis_palliatus
ENSACAG00000005452	MSI2	71	94.811	ENSCGRG00001013330	Msi2	94	94.811	Cricetulus_griseus_chok1gshd
ENSACAG00000005452	MSI2	68	97.826	ENSCGRG00000003141	Msi2	100	70.904	Cricetulus_griseus_crigri
ENSACAG00000005452	MSI2	50	79.279	ENSCSEG00000013557	msi2a	83	79.279	Cynoglossus_semilaevis
ENSACAG00000005452	MSI2	71	80.660	ENSCSEG00000003266	-	87	83.696	Cynoglossus_semilaevis
ENSACAG00000005452	MSI2	88	81.356	ENSCVAG00000017075	msi2a	93	93.011	Cyprinodon_variegatus
ENSACAG00000005452	MSI2	88	77.540	ENSDARG00000032614	msi2b	100	98.901	Danio_rerio
ENSACAG00000005452	MSI2	88	80.791	ENSDARG00000033901	msi2a	95	80.791	Danio_rerio
ENSACAG00000005452	MSI2	74	95.455	ENSDNOG00000014501	MSI2	95	97.826	Dasypus_novemcinctus
ENSACAG00000005452	MSI2	87	55.301	ENSEBUG00000006732	msi2a	86	55.301	Eptatretus_burgeri
ENSACAG00000005452	MSI2	70	99.057	ENSEASG00005002965	MSI2	97	79.037	Equus_asinus_asinus
ENSACAG00000005452	MSI2	88	77.620	ENSECAG00000011435	MSI2	83	95.890	Equus_caballus
ENSACAG00000005452	MSI2	67	84.615	ENSEEUG00000007810	MSI2	96	80.769	Erinaceus_europaeus
ENSACAG00000005452	MSI2	88	82.500	ENSELUG00000001361	msi2b	89	95.109	Esox_lucius
ENSACAG00000005452	MSI2	88	81.408	ENSELUG00000011747	msi2a	93	92.925	Esox_lucius
ENSACAG00000005452	MSI2	74	95.455	ENSFCAG00000041686	MSI2	92	97.849	Felis_catus
ENSACAG00000005452	MSI2	68	97.826	ENSFDAG00000016118	MSI2	100	71.105	Fukomys_damarensis
ENSACAG00000005452	MSI2	88	75.603	ENSFHEG00000000084	msi2a	89	93.478	Fundulus_heteroclitus
ENSACAG00000005452	MSI2	68	98.370	ENSGALG00000005567	MSI2	94	71.105	Gallus_gallus
ENSACAG00000005452	MSI2	66	79.724	ENSGAFG00000006974	msi2a	78	95.604	Gambusia_affinis
ENSACAG00000005452	MSI2	95	90.000	ENSGAGG00000016542	MSI2	91	90.000	Gopherus_agassizii
ENSACAG00000005452	MSI2	68	97.826	ENSGGOG00000013182	MSI2	92	97.849	Gorilla_gorilla
ENSACAG00000005452	MSI2	88	75.603	ENSHBUG00000020800	msi2a	93	92.473	Haplochromis_burtoni
ENSACAG00000005452	MSI2	68	94.186	ENSHGLG00000012444	MSI2	61	95.556	Heterocephalus_glaber_female
ENSACAG00000005452	MSI2	88	75.067	ENSHCOG00000000266	msi2a	80	92.935	Hippocampus_comes
ENSACAG00000005452	MSI2	85	66.938	ENSHCOG00000017241	-	91	65.556	Hippocampus_comes
ENSACAG00000005452	MSI2	88	83.051	ENSIPUG00000003732	msi2b	89	89.674	Ictalurus_punctatus
ENSACAG00000005452	MSI2	88	77.747	ENSIPUG00000021097	msi2a	93	95.699	Ictalurus_punctatus
ENSACAG00000005452	MSI2	76	95.455	ENSSTOG00000007884	MSI2	93	95.855	Ictidomys_tridecemlineatus
ENSACAG00000005452	MSI2	69	62.044	ENSJJAG00000006292	-	100	62.044	Jaculus_jaculus
ENSACAG00000005452	MSI2	88	80.791	ENSKMAG00000009494	msi2a	84	92.935	Kryptolebias_marmoratus
ENSACAG00000005452	MSI2	88	70.474	ENSLBEG00000026223	-	97	70.474	Labrus_bergylta
ENSACAG00000005452	MSI2	88	75.871	ENSLBEG00000007061	msi2a	89	93.478	Labrus_bergylta
ENSACAG00000005452	MSI2	88	85.028	ENSLOCG00000004675	msi2b	95	85.028	Lepisosteus_oculatus
ENSACAG00000005452	MSI2	68	97.826	ENSMFAG00000003775	MSI2	92	97.849	Macaca_fascicularis
ENSACAG00000005452	MSI2	68	97.826	ENSMMUG00000002069	MSI2	92	97.849	Macaca_mulatta
ENSACAG00000005452	MSI2	74	95.455	ENSMNEG00000045275	MSI2	92	97.849	Macaca_nemestrina
ENSACAG00000005452	MSI2	68	97.826	ENSMLEG00000033888	MSI2	92	97.849	Mandrillus_leucophaeus
ENSACAG00000005452	MSI2	88	74.211	ENSMAMG00000002488	-	85	95.604	Mastacembelus_armatus
ENSACAG00000005452	MSI2	88	75.668	ENSMAMG00000010503	msi2a	93	93.011	Mastacembelus_armatus
ENSACAG00000005452	MSI2	88	75.603	ENSMZEG00005007676	msi2a	90	92.935	Maylandia_zebra
ENSACAG00000005452	MSI2	68	97.826	ENSMAUG00000003862	Msi2	94	70.904	Mesocricetus_auratus
ENSACAG00000005452	MSI2	60	88.060	ENSMICG00000032913	-	93	84.722	Microcebus_murinus
ENSACAG00000005452	MSI2	74	95.455	ENSMICG00000013598	-	92	97.849	Microcebus_murinus
ENSACAG00000005452	MSI2	68	97.826	ENSMOCG00000005820	Msi2	94	71.105	Microtus_ochrogaster
ENSACAG00000005452	MSI2	63	89.950	ENSMMOG00000008348	msi2a	85	94.022	Mola_mola
ENSACAG00000005452	MSI2	88	94.624	ENSMALG00000000071	msi2a	93	94.624	Monopterus_albus
ENSACAG00000005452	MSI2	74	95.455	MGP_CAROLIEiJ_G0016948	Msi2	100	98.667	Mus_caroli
ENSACAG00000005452	MSI2	74	95.455	ENSMUSG00000069769	Msi2	100	98.667	Mus_musculus
ENSACAG00000005452	MSI2	74	95.455	MGP_PahariEiJ_G0018079	Msi2	100	98.667	Mus_pahari
ENSACAG00000005452	MSI2	74	95.455	MGP_SPRETEiJ_G0017795	Msi2	100	98.667	Mus_spretus
ENSACAG00000005452	MSI2	74	95.455	ENSMPUG00000015377	MSI2	93	97.826	Mustela_putorius_furo
ENSACAG00000005452	MSI2	74	95.455	ENSMLUG00000007865	MSI2	93	97.826	Myotis_lucifugus
ENSACAG00000005452	MSI2	68	97.826	ENSNGAG00000017807	Msi2	94	71.105	Nannospalax_galili
ENSACAG00000005452	MSI2	88	81.356	ENSNBRG00000014596	msi2a	89	92.935	Neolamprologus_brichardi
ENSACAG00000005452	MSI2	68	97.826	ENSNLEG00000008059	MSI2	95	97.849	Nomascus_leucogenys
ENSACAG00000005452	MSI2	68	97.826	ENSODEG00000011974	MSI2	94	71.105	Octodon_degus
ENSACAG00000005452	MSI2	88	80.593	ENSOANG00000005667	MSI2	97	80.863	Ornithorhynchus_anatinus
ENSACAG00000005452	MSI2	74	95.455	ENSOCUG00000010440	MSI2	93	97.826	Oryctolagus_cuniculus
ENSACAG00000005452	MSI2	88	81.638	ENSORLG00000009671	msi2a	90	93.478	Oryzias_latipes
ENSACAG00000005452	MSI2	88	75.871	ENSORLG00020021556	msi2a	93	93.011	Oryzias_latipes_hni
ENSACAG00000005452	MSI2	88	81.638	ENSORLG00015004592	msi2a	90	93.478	Oryzias_latipes_hsok
ENSACAG00000005452	MSI2	88	81.638	ENSOMEG00000000146	msi2a	93	93.011	Oryzias_melastigma
ENSACAG00000005452	MSI2	74	95.455	ENSOGAG00000005621	MSI2	95	91.549	Otolemur_garnettii
ENSACAG00000005452	MSI2	68	97.826	ENSPPAG00000037697	MSI2	92	97.849	Pan_paniscus
ENSACAG00000005452	MSI2	74	95.455	ENSPPRG00000001848	MSI2	92	97.849	Panthera_pardus
ENSACAG00000005452	MSI2	68	97.826	ENSPTIG00000021678	MSI2	84	97.849	Panthera_tigris_altaica
ENSACAG00000005452	MSI2	68	97.826	ENSPTRG00000009437	MSI2	92	97.849	Pan_troglodytes
ENSACAG00000005452	MSI2	74	95.455	ENSPANG00000022319	MSI2	92	97.849	Papio_anubis
ENSACAG00000005452	MSI2	88	74.788	ENSPKIG00000007038	-	89	91.935	Paramormyrops_kingsleyae
ENSACAG00000005452	MSI2	88	96.034	ENSPSIG00000008618	MSI2	95	96.034	Pelodiscus_sinensis
ENSACAG00000005452	MSI2	70	90.094	ENSPMGG00000005888	msi2a	89	92.935	Periophthalmus_magnuspinnatus
ENSACAG00000005452	MSI2	68	98.913	ENSPCIG00000006063	MSI2	94	74.221	Phascolarctos_cinereus
ENSACAG00000005452	MSI2	88	75.603	ENSPREG00000000881	msi2a	88	93.478	Poecilia_reticulata
ENSACAG00000005452	MSI2	67	95.455	ENSPPYG00000008244	-	94	92.857	Pongo_abelii
ENSACAG00000005452	MSI2	67	95.455	ENSPCAG00000010552	MSI2	95	91.549	Procavia_capensis
ENSACAG00000005452	MSI2	56	99.363	ENSPVAG00000017053	MSI2	86	99.363	Pteropus_vampyrus
ENSACAG00000005452	MSI2	88	75.603	ENSPNYG00000018393	msi2a	93	92.473	Pundamilia_nyererei
ENSACAG00000005452	MSI2	88	83.662	ENSPNAG00000014957	msi2a	89	96.196	Pygocentrus_nattereri
ENSACAG00000005452	MSI2	88	82.817	ENSPNAG00000000844	msi2b	89	96.196	Pygocentrus_nattereri
ENSACAG00000005452	MSI2	74	95.455	ENSRNOG00000025338	Msi2	95	97.826	Rattus_norvegicus
ENSACAG00000005452	MSI2	68	97.826	ENSSBOG00000026425	MSI2	92	97.849	Saimiri_boliviensis_boliviensis
ENSACAG00000005452	MSI2	68	98.913	ENSSHAG00000008672	MSI2	100	71.105	Sarcophilus_harrisii
ENSACAG00000005452	MSI2	88	72.034	ENSSFOG00015012168	msi2b	87	72.034	Scleropages_formosus
ENSACAG00000005452	MSI2	71	88.679	ENSSFOG00015021687	-	97	90.625	Scleropages_formosus
ENSACAG00000005452	MSI2	88	75.871	ENSSMAG00000018484	msi2a	93	93.011	Scophthalmus_maximus
ENSACAG00000005452	MSI2	88	75.871	ENSSDUG00000014507	msi2a	93	93.011	Seriola_dumerili
ENSACAG00000005452	MSI2	69	87.879	ENSSDUG00000021968	-	86	94.505	Seriola_dumerili
ENSACAG00000005452	MSI2	88	75.871	ENSSLDG00000017172	msi2a	89	93.478	Seriola_lalandi_dorsalis
ENSACAG00000005452	MSI2	88	75.871	ENSSPAG00000017793	msi2a	89	93.011	Stegastes_partitus
ENSACAG00000005452	MSI2	74	95.455	ENSSSCG00000038505	MSI2	90	97.826	Sus_scrofa
ENSACAG00000005452	MSI2	78	83.333	ENSTRUG00000021248	msi2a	83	93.478	Takifugu_rubripes
ENSACAG00000005452	MSI2	54	99.342	ENSTTRG00000002189	MSI2	91	99.342	Tursiops_truncatus
ENSACAG00000005452	MSI2	77	96.923	ENSUAMG00000000700	MSI2	96	97.312	Ursus_americanus
ENSACAG00000005452	MSI2	67	96.154	ENSUMAG00000000505	MSI2	95	97.312	Ursus_maritimus
ENSACAG00000005452	MSI2	74	95.455	ENSVVUG00000011783	MSI2	68	98.901	Vulpes_vulpes
ENSACAG00000005452	MSI2	88	80.398	ENSXCOG00000006113	msi2a	95	80.398	Xiphophorus_couchianus
ENSACAG00000005452	MSI2	88	75.603	ENSXMAG00000000608	msi2a	93	93.011	Xiphophorus_maculatus